RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 ABCC10Q5T3U5 1492 aa10.78□□□□□ -0.68
HOXA9-206ENST00000497089 UHRF1BP1LA0JNW5 1464 aa10.77□□□□□ -0.68
HOXA9-206ENST00000497089 ABCC2Q92887 1545 aa10.76□□□□□ -0.69
HOXA9-206ENST00000497089 KIAA0556O60303 1618 aa10.76□□□□□ -0.69
HOXA9-206ENST00000497089 DIP2BQ9P265 1576 aa10.76□□□□□ -0.69
HOXA9-206ENST00000497089 POTEFA5A3E0 1075 aa10.76□□□□□ -0.69
HOXA9-206ENST00000497089 DPY19L2Q6NUT2 758 aa10.76□□□□□ -0.69
HOXA9-206ENST00000497089 EEA1Q15075 1411 aa10.74□□□□□ -0.69
HOXA9-206ENST00000497089 UACAQ9BZF9 1416 aa10.74□□□□□ -0.69
HOXA9-206ENST00000497089 GOLGA3Q08378 1498 aa10.73□□□□□ -0.69
HOXA9-206ENST00000497089 KDM5BQ9UGL1 1544 aa10.72□□□□□ -0.69
HOXA9-206ENST00000497089 FAM69CQ0P6D2 419 aa10.71□□□□□ -0.69
HOXA9-206ENST00000497089 PLB1Q6P1J6 1458 aa10.7□□□□□ -0.7
HOXA9-206ENST00000497089 GLI2P10070 1586 aa10.69□□□□□ -0.7
HOXA9-206ENST00000497089 ASXL2Q76L83 1435 aa10.69□□□□□ -0.7
HOXA9-206ENST00000497089 L3MBTL3Q96JM7 780 aaPredicted RBP10.68□□□□□ -0.7
HOXA9-206ENST00000497089 BOLA1Q9Y3E2 137 aa10.68□□□□□ -0.7
HOXA9-206ENST00000497089 TTBK1Q5TCY1 1321 aaPredicted RBP10.68□□□□□ -0.7
HOXA9-206ENST00000497089 ABCA8O94911 1581 aa10.67□□□□□ -0.7
HOXA9-206ENST00000497089 NBR1Q14596 966 aa10.67□□□□□ -0.7
HOXA9-206ENST00000497089 MICALL2Q8IY33 904 aa10.67□□□□□ -0.7
HOXA9-206ENST00000497089 TMEM121BQ9BXQ6 578 aaPredicted RBP10.67□□□□□ -0.7
HOXA9-206ENST00000497089 ZCCHC11Q5TAX3 1644 aaKnown RBP10.67□□□□□ -0.7
HOXA9-206ENST00000497089 SAMD9Q5K651 1589 aa10.66□□□□□ -0.7
HOXA9-206ENST00000497089 G3V3G9 751 aa10.65□□□□□ -0.71
HOXA9-206ENST00000497089 CADPS2Q86UW7 1296 aa10.65□□□□□ -0.71
HOXA9-206ENST00000497089 KIF21BO75037 1637 aa10.64□□□□□ -0.71
HOXA9-206ENST00000497089 EPRSP07814 1512 aaKnown RBP10.63□□□□□ -0.71
HOXA9-206ENST00000497089 PPRC1Q5VV67 1664 aaKnown RBP10.62□□□□□ -0.71
HOXA9-206ENST00000497089 TSPOAP1O95153 1857 aa10.62□□□□□ -0.71
HOXA9-206ENST00000497089 WDR70Q9NW82 654 aa10.62□□□□□ -0.71
HOXA9-206ENST00000497089 MAP3K4Q9Y6R4 1608 aa10.62□□□□□ -0.71
HOXA9-206ENST00000497089 WDR7Q9Y4E6 1490 aa10.61□□□□□ -0.71
HOXA9-206ENST00000497089 KDM6BO15054 1643 aa10.6□□□□□ -0.71
HOXA9-206ENST00000497089 POTEB2H3BUK9 544 aa10.59□□□□□ -0.71
HOXA9-206ENST00000497089 FAM9AQ8IZU1 332 aaPredicted RBP10.58□□□□□ -0.72
HOXA9-206ENST00000497089 ATP10BO94823 1461 aa10.57□□□□□ -0.72
HOXA9-206ENST00000497089 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
HOXA9-206ENST00000497089 EFCAB5A4FU69 1503 aa10.57□□□□□ -0.72
HOXA9-206ENST00000497089 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
HOXA9-206ENST00000497089 TEX14Q8IWB6 1497 aa10.56□□□□□ -0.72
HOXA9-206ENST00000497089 RAPGEF6Q8TEU7 1601 aa10.56□□□□□ -0.72
HOXA9-206ENST00000497089 P3H3Q8IVL6 736 aa10.56□□□□□ -0.72
HOXA9-206ENST00000497089 CFAP43Q8NDM7 1665 aa10.56□□□□□ -0.72
HOXA9-206ENST00000497089 C3orf67Q6ZVT6 689 aa10.55□□□□□ -0.72
HOXA9-206ENST00000497089 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
HOXA9-206ENST00000497089 MAGI3Q5TCQ9 1506 aa10.54□□□□□ -0.72
HOXA9-206ENST00000497089 PDE4AP27815 886 aa10.54□□□□□ -0.72
HOXA9-206ENST00000497089 NUP153P49790 1475 aaKnown RBP10.53□□□□□ -0.72
HOXA9-206ENST00000497089 FHOD3Q2V2M9 1422 aa10.53□□□□□ -0.72
HOXA9-206ENST00000497089 PRKCSHP14314 528 aaPredicted RBP10.52□□□□□ -0.72
HOXA9-206ENST00000497089 TPRNQ4KMQ1 711 aa10.52□□□□□ -0.72
HOXA9-206ENST00000497089 GPHNQ9NQX3 736 aaPredicted RBP10.52□□□□□ -0.72
HOXA9-206ENST00000497089 COL17A1Q9UMD9 1497 aaPredicted RBP10.52□□□□□ -0.72
HOXA9-206ENST00000497089 CD109Q6YHK3 1445 aa10.52□□□□□ -0.73
HOXA9-206ENST00000497089 KIF3CO14782 793 aa10.51□□□□□ -0.73
HOXA9-206ENST00000497089 TMEM92Q6UXU6 159 aa10.51□□□□□ -0.73
HOXA9-206ENST00000497089 TMC2Q8TDI7 906 aa10.51□□□□□ -0.73
HOXA9-206ENST00000497089 LARP6Q9BRS8 491 aaKnown RBP10.51□□□□□ -0.73
HOXA9-206ENST00000497089 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.51□□□□□ -0.73
HOXA9-206ENST00000497089 ABCA9Q8IUA7 1624 aa10.51□□□□□ -0.73
HOXA9-206ENST00000497089 MFSD10Q14728 455 aa10.5□□□□□ -0.73
HOXA9-206ENST00000497089 KCNH8Q96L42 1107 aa10.5□□□□□ -0.73
HOXA9-206ENST00000497089 C2orf72A6NCS6 295 aa10.49□□□□□ -0.73
HOXA9-206ENST00000497089 MAMSTRQ6ZN01 415 aa10.49□□□□□ -0.73
HOXA9-206ENST00000497089 UBTFP17480 764 aaKnown RBP10.48□□□□□ -0.73
HOXA9-206ENST00000497089 HRCP23327 699 aa10.48□□□□□ -0.73
HOXA9-206ENST00000497089 DDX27Q96GQ7 796 aaKnown RBP10.48□□□□□ -0.73
HOXA9-206ENST00000497089 ARHGAP35Q9NRY4 1499 aa10.48□□□□□ -0.73
HOXA9-206ENST00000497089 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
HOXA9-206ENST00000497089 ARAP3Q8WWN8 1544 aa10.47□□□□□ -0.73
HOXA9-206ENST00000497089 PHLDB1Q86UU1 1377 aa10.46□□□□□ -0.73
HOXA9-206ENST00000497089 FMN1Q68DA7 1419 aa10.46□□□□□ -0.73
HOXA9-206ENST00000497089 ARID3CA6NKF2 412 aa10.46□□□□□ -0.74
HOXA9-206ENST00000497089 RANGAP1P46060 587 aaPredicted RBP10.46□□□□□ -0.74
HOXA9-206ENST00000497089 FOXK1P85037 733 aa10.45□□□□□ -0.74
HOXA9-206ENST00000497089 DSG2Q14126 1118 aa10.45□□□□□ -0.74
HOXA9-206ENST00000497089 PPP1R15BQ5SWA1 713 aa10.44□□□□□ -0.74
HOXA9-206ENST00000497089 NEO1Q92859 1461 aa10.44□□□□□ -0.74
HOXA9-206ENST00000497089 KDM4FA0A1W2PPD8 638 aa10.43□□□□□ -0.74
HOXA9-206ENST00000497089 PLEKHD1A6NEE1 506 aa10.43□□□□□ -0.74
HOXA9-206ENST00000497089 KCNV2Q8TDN2 545 aa10.42□□□□□ -0.74
HOXA9-206ENST00000497089 HECW1Q76N89 1606 aa10.42□□□□□ -0.74
HOXA9-206ENST00000497089 CDK13Q14004 1512 aaKnown RBP10.41□□□□□ -0.74
HOXA9-206ENST00000497089 E2F4Q16254 413 aa10.4□□□□□ -0.74
HOXA9-206ENST00000497089 PLPP6Q8IY26 295 aa10.4□□□□□ -0.74
HOXA9-206ENST00000497089 SLAIN1Q8ND83 568 aa10.4□□□□□ -0.74
HOXA9-206ENST00000497089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.4□□□□□ -0.74
HOXA9-206ENST00000497089 OTUD5Q96G74 571 aa10.4□□□□□ -0.74
HOXA9-206ENST00000497089 TTC37Q6PGP7 1564 aa10.38□□□□□ -0.75
HOXA9-206ENST00000497089 ADGRL1O94910 1474 aa10.38□□□□□ -0.75
HOXA9-206ENST00000497089 LRRIQ1Q96JM4 1722 aa10.38□□□□□ -0.75
HOXA9-206ENST00000497089 CAMK2BQ13554 666 aa10.38□□□□□ -0.75
HOXA9-206ENST00000497089 ARHGEF1Q92888 912 aaKnown RBP10.38□□□□□ -0.75
HOXA9-206ENST00000497089 CFAP74Q9C0B2 1584 aa10.37□□□□□ -0.75
HOXA9-206ENST00000497089 CASKIN1Q8WXD9 1431 aa10.37□□□□□ -0.75
HOXA9-206ENST00000497089 FRMPD1Q5SYB0 1578 aa10.37□□□□□ -0.75
HOXA9-206ENST00000497089 FANCAO15360 1455 aa10.36□□□□□ -0.75
HOXA9-206ENST00000497089 CDK11AQ9UQ88 783 aaPredicted RBP10.36□□□□□ -0.75
HOXA9-206ENST00000497089 TROQ12816 1431 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms