RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 KIF12Q96FN5 646 aa5.54□□□□□ -1.52
SHTN1-206ENST00000497044 CRISPLD2Q9H0B8 497 aa5.54□□□□□ -1.52
SHTN1-206ENST00000497044 FARP1Q9Y4F1 1045 aaPredicted RBP5.54□□□□□ -1.52
SHTN1-206ENST00000497044 RIMS1Q86UR5 1692 aaKnown RBP5.54□□□□□ -1.52
SHTN1-206ENST00000497044 NPATQ14207 1427 aa5.53□□□□□ -1.52
SHTN1-206ENST00000497044 ZFYVE16Q7Z3T8 1539 aa5.53□□□□□ -1.52
SHTN1-206ENST00000497044 PLA2R1Q13018 1463 aa5.53□□□□□ -1.52
SHTN1-206ENST00000497044 CD109Q6YHK3 1445 aa5.53□□□□□ -1.52
SHTN1-206ENST00000497044 LTBP4Q8N2S1 1624 aa5.53□□□□□ -1.52
SHTN1-206ENST00000497044 PRXQ9BXM0 1461 aa5.52□□□□□ -1.53
SHTN1-206ENST00000497044 AKNAQ7Z591 1439 aa5.52□□□□□ -1.53
SHTN1-206ENST00000497044 FAM212AQ96EL1 285 aa5.52□□□□□ -1.53
SHTN1-206ENST00000497044 CARMIL1Q5VZK9 1371 aa5.52□□□□□ -1.53
SHTN1-206ENST00000497044 MYO5CQ9NQX4 1742 aa5.52□□□□□ -1.53
SHTN1-206ENST00000497044 CNTLNQ9NXG0 1405 aa5.51□□□□□ -1.53
SHTN1-206ENST00000497044 SETD1BQ9UPS6 1966 aaKnown RBP5.51□□□□□ -1.53
SHTN1-206ENST00000497044 KDM5AP29375 1690 aaKnown RBP5.51□□□□□ -1.53
SHTN1-206ENST00000497044 SYNMO15061 1565 aa5.51□□□□□ -1.53
SHTN1-206ENST00000497044 GPR37O15354 613 aa5.51□□□□□ -1.53
SHTN1-206ENST00000497044 CACNB1Q02641 598 aaPredicted RBP5.51□□□□□ -1.53
SHTN1-206ENST00000497044 TMEM121BQ9BXQ6 578 aaPredicted RBP5.51□□□□□ -1.53
SHTN1-206ENST00000497044 TMEM132AQ24JP5 1023 aa5.5□□□□□ -1.53
SHTN1-206ENST00000497044 BCL11BQ9C0K0 894 aaPredicted RBP5.5□□□□□ -1.53
SHTN1-206ENST00000497044 EEA1Q15075 1411 aa5.5□□□□□ -1.53
SHTN1-206ENST00000497044 DEPDC5O75140 1603 aa5.5□□□□□ -1.53
SHTN1-206ENST00000497044 ZMYND10O75800 440 aa5.5□□□□□ -1.53
SHTN1-206ENST00000497044 PRR29P0C7W0 189 aa5.5□□□□□ -1.53
SHTN1-206ENST00000497044 KIF3CO14782 793 aa5.5□□□□□ -1.53
SHTN1-206ENST00000497044 ARHGEF1Q92888 912 aaKnown RBP5.5□□□□□ -1.53
SHTN1-206ENST00000497044 ITSN2Q9NZM3 1697 aa5.49□□□□□ -1.53
SHTN1-206ENST00000497044 C9orf84Q5VXU9 1444 aa5.49□□□□□ -1.53
SHTN1-206ENST00000497044 SOX12O15370 315 aa5.49□□□□□ -1.53
SHTN1-206ENST00000497044 CIZ1Q9ULV3 898 aaPredicted RBP5.49□□□□□ -1.53
SHTN1-206ENST00000497044 CPS1P31327 1500 aa5.49□□□□□ -1.53
SHTN1-206ENST00000497044 IFNL1Q8IU54 200 aa5.49□□□□□ -1.53
SHTN1-206ENST00000497044 DENND4BO75064 1496 aaPredicted RBP5.48□□□□□ -1.53
SHTN1-206ENST00000497044 MLH3Q9UHC1 1453 aa5.48□□□□□ -1.53
SHTN1-206ENST00000497044 C3P01024 1663 aa5.48□□□□□ -1.53
SHTN1-206ENST00000497044 POLR1AO95602 1720 aaPredicted RBP5.47□□□□□ -1.53
SHTN1-206ENST00000497044 C19orf67A6NJJ6 358 aa5.47□□□□□ -1.53
SHTN1-206ENST00000497044 RYDENQ9NUL5 291 aaKnown RBP5.47□□□□□ -1.53
SHTN1-206ENST00000497044 YEATS2Q9ULM3 1422 aa5.47□□□□□ -1.53
SHTN1-206ENST00000497044 ATP10AO60312 1499 aa5.47□□□□□ -1.53
SHTN1-206ENST00000497044 ATP10BO94823 1461 aa5.47□□□□□ -1.53
SHTN1-206ENST00000497044 SOCS7O14512 581 aa5.47□□□□□ -1.53
SHTN1-206ENST00000497044 PYGBP11216 843 aa5.47□□□□□ -1.53
SHTN1-206ENST00000497044 PDAP1Q13442 181 aaKnown RBP5.47□□□□□ -1.53
SHTN1-206ENST00000497044 PIP4P2Q8N4L2 257 aa5.47□□□□□ -1.53
SHTN1-206ENST00000497044 SIGLEC1Q9BZZ2 1709 aa5.47□□□□□ -1.53
SHTN1-206ENST00000497044 KIF14Q15058 1648 aa5.47□□□□□ -1.53
SHTN1-206ENST00000497044 PLXNC1O60486 1568 aa5.47□□□□□ -1.53
SHTN1-206ENST00000497044 ADGBQ8N7X0 1667 aa5.46□□□□□ -1.53
SHTN1-206ENST00000497044 PREX2Q70Z35 1606 aa5.46□□□□□ -1.54
SHTN1-206ENST00000497044 ZC3H13Q5T200 1668 aaKnown RBP5.46□□□□□ -1.54
SHTN1-206ENST00000497044 ZNF467Q7Z7K2 595 aaPredicted RBP5.46□□□□□ -1.54
SHTN1-206ENST00000497044 TIMELESSQ9UNS1 1208 aa5.46□□□□□ -1.54
SHTN1-206ENST00000497044 HECW1Q76N89 1606 aa5.46□□□□□ -1.54
SHTN1-206ENST00000497044 DIP2CQ9Y2E4 1556 aa5.45□□□□□ -1.54
SHTN1-206ENST00000497044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.45□□□□□ -1.54
SHTN1-206ENST00000497044 CAMSAP2Q08AD1 1489 aa5.45□□□□□ -1.54
SHTN1-206ENST00000497044 BRPF1P55201 1214 aaPredicted RBP5.44□□□□□ -1.54
SHTN1-206ENST00000497044 DCAF8Q5TAQ9 597 aa5.44□□□□□ -1.54
SHTN1-206ENST00000497044 ZC3H15Q8WU90 426 aaKnown RBP5.44□□□□□ -1.54
SHTN1-206ENST00000497044 NCOA1Q15788 1441 aa5.43□□□□□ -1.54
SHTN1-206ENST00000497044 STK25O00506 426 aa5.43□□□□□ -1.54
SHTN1-206ENST00000497044 TCOF1Q13428 1488 aaKnown RBP5.43□□□□□ -1.54
SHTN1-206ENST00000497044 ZNF518AQ6AHZ1 1483 aa5.43□□□□□ -1.54
SHTN1-206ENST00000497044 PLCH2O75038 1416 aa5.43□□□□□ -1.54
SHTN1-206ENST00000497044 MYO3AQ8NEV4 1616 aa5.43□□□□□ -1.54
SHTN1-206ENST00000497044 INO80Q9ULG1 1556 aaPredicted RBP5.42□□□□□ -1.54
SHTN1-206ENST00000497044 PSEN1P49768 467 aa5.42□□□□□ -1.54
SHTN1-206ENST00000497044 PLEKHG5O94827 1062 aa5.42□□□□□ -1.54
SHTN1-206ENST00000497044 PCDHB8Q9UN66 801 aa5.42□□□□□ -1.54
SHTN1-206ENST00000497044 PCDHB13Q9Y5F0 798 aa5.42□□□□□ -1.54
SHTN1-206ENST00000497044 MED14O60244 1454 aa5.41□□□□□ -1.54
SHTN1-206ENST00000497044 NUP153P49790 1475 aaKnown RBP5.41□□□□□ -1.54
SHTN1-206ENST00000497044 RNF17Q9BXT8 1623 aaKnown RBP5.41□□□□□ -1.54
SHTN1-206ENST00000497044 ABCC1P33527 1531 aa5.41□□□□□ -1.54
SHTN1-206ENST00000497044 EIF2AK4Q9P2K8 1649 aaKnown RBP5.41□□□□□ -1.54
SHTN1-206ENST00000497044 PLEKHH2Q8IVE3 1493 aa5.41□□□□□ -1.54
SHTN1-206ENST00000497044 MAP3K13O43283 966 aa5.41□□□□□ -1.54
SHTN1-206ENST00000497044 CERKQ8TCT0 537 aa5.41□□□□□ -1.54
SHTN1-206ENST00000497044 FAM9AQ8IZU1 332 aaPredicted RBP5.4□□□□□ -1.54
SHTN1-206ENST00000497044 ABCA6Q8N139 1617 aa5.4□□□□□ -1.54
SHTN1-206ENST00000497044 P3H3Q8IVL6 736 aa5.4□□□□□ -1.55
SHTN1-206ENST00000497044 STK24Q9Y6E0 443 aa5.4□□□□□ -1.55
SHTN1-206ENST00000497044 KDM5DQ9BY66 1539 aa5.39□□□□□ -1.55
SHTN1-206ENST00000497044 TRAPPC8Q9Y2L5 1435 aa5.39□□□□□ -1.55
SHTN1-206ENST00000497044 CCDC18Q5T9S5 1454 aa5.39□□□□□ -1.55
SHTN1-206ENST00000497044 CDC42BPBQ9Y5S2 1711 aa5.39□□□□□ -1.55
SHTN1-206ENST00000497044 UHRF1BP1Q6BDS2 1440 aa5.39□□□□□ -1.55
SHTN1-206ENST00000497044 PTGER2P43116 358 aa5.38□□□□□ -1.55
SHTN1-206ENST00000497044 EFCAB3Q8N7B9 438 aa5.38□□□□□ -1.55
SHTN1-206ENST00000497044 KIDINS220Q9ULH0 1771 aa5.38□□□□□ -1.55
SHTN1-206ENST00000497044 SUPT6HQ7KZ85 1726 aaKnown RBP5.38□□□□□ -1.55
SHTN1-206ENST00000497044 TRPC6Q9Y210 931 aa5.38□□□□□ -1.55
SHTN1-206ENST00000497044 MAST1Q9Y2H9 1570 aa5.38□□□□□ -1.55
SHTN1-206ENST00000497044 MED1Q15648 1581 aaPredicted RBP5.38□□□□□ -1.55
SHTN1-206ENST00000497044 CHADLQ6NUI6 762 aa5.38□□□□□ -1.55
SHTN1-206ENST00000497044 BARGINQ6ZT62 677 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms