RNA–Protein interactions for RNA: ENST00000496897.5

USP13-203, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 2 BASIC

Gene USP13, Length 2,747 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-203ENST00000496897 ADAMTS12P58397 1594 aa10.64□□□□□ -0.71
USP13-203ENST00000496897 SMG6Q86US8 1419 aaKnown RBP10.64□□□□□ -0.71
USP13-203ENST00000496897 ARAP1Q96P48 1450 aa10.64□□□□□ -0.71
USP13-203ENST00000496897 MRE11P49959 708 aa10.64□□□□□ -0.71
USP13-203ENST00000496897 CCDC94Q9BW85 323 aaPredicted RBP10.64□□□□□ -0.71
USP13-203ENST00000496897 ERICH3Q5RHP9 1530 aa10.63□□□□□ -0.71
USP13-203ENST00000496897 CERS3Q8IU89 383 aa10.63□□□□□ -0.71
USP13-203ENST00000496897 UBTFP17480 764 aaKnown RBP10.62□□□□□ -0.71
USP13-203ENST00000496897 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.62□□□□□ -0.71
USP13-203ENST00000496897 SLC52A1Q9NWF4 448 aa10.62□□□□□ -0.71
USP13-203ENST00000496897 HDAC5Q9UQL6 1122 aa10.62□□□□□ -0.71
USP13-203ENST00000496897 NUDCQ9Y266 331 aa10.62□□□□□ -0.71
USP13-203ENST00000496897 MMP14P50281 582 aa10.61□□□□□ -0.71
USP13-203ENST00000496897 CGNQ9P2M7 1197 aaKnown RBP10.61□□□□□ -0.71
USP13-203ENST00000496897 GZF1Q9H116 711 aaPredicted RBP10.6□□□□□ -0.71
USP13-203ENST00000496897 TMC1Q8TDI8 760 aa10.6□□□□□ -0.71
USP13-203ENST00000496897 R3HCC1Q9Y3T6 440 aaKnown RBP10.6□□□□□ -0.71
USP13-203ENST00000496897 NUP160Q12769 1436 aa10.6□□□□□ -0.71
USP13-203ENST00000496897 CLGNO14967 610 aa10.59□□□□□ -0.71
USP13-203ENST00000496897 SHROOM2Q13796 1616 aa10.59□□□□□ -0.71
USP13-203ENST00000496897 UQCRHLA0A096LP55 91 aa10.59□□□□□ -0.71
USP13-203ENST00000496897 UQCRHP07919 91 aa10.59□□□□□ -0.71
USP13-203ENST00000496897 GRIN2AQ12879 1464 aa10.58□□□□□ -0.72
USP13-203ENST00000496897 GRPEL1Q9HAV7 217 aa10.58□□□□□ -0.72
USP13-203ENST00000496897 MYCNP04198 464 aaPredicted RBP10.58□□□□□ -0.72
USP13-203ENST00000496897 IRX5P78411 483 aaPredicted RBP10.58□□□□□ -0.72
USP13-203ENST00000496897 AEBP1Q8IUX7 1158 aa10.58□□□□□ -0.72
USP13-203ENST00000496897 EXOC6Q8TAG9 804 aa10.58□□□□□ -0.72
USP13-203ENST00000496897 FHAD1B1AJZ9 1412 aa10.57□□□□□ -0.72
USP13-203ENST00000496897 DYNC1I1O14576 645 aa10.57□□□□□ -0.72
USP13-203ENST00000496897 MAPKBP1O60336 1514 aa10.57□□□□□ -0.72
USP13-203ENST00000496897 SKAP1Q86WV1 359 aa10.57□□□□□ -0.72
USP13-203ENST00000496897 APPP05067 770 aa10.57□□□□□ -0.72
USP13-203ENST00000496897 PSEN1P49768 467 aa10.57□□□□□ -0.72
USP13-203ENST00000496897 SLC20A2Q08357 652 aa10.56□□□□□ -0.72
USP13-203ENST00000496897 MRS2Q9HD23 443 aa10.56□□□□□ -0.72
USP13-203ENST00000496897 FAM193AP78312 1265 aa10.56□□□□□ -0.72
USP13-203ENST00000496897 CHMP7Q8WUX9 453 aaPredicted RBP10.56□□□□□ -0.72
USP13-203ENST00000496897 CBX1P83916 185 aa10.55□□□□□ -0.72
USP13-203ENST00000496897 NGEFQ8N5V2 710 aa10.55□□□□□ -0.72
USP13-203ENST00000496897 RUSC2Q8N2Y8 1516 aa10.55□□□□□ -0.72
USP13-203ENST00000496897 ZSCAN30Q86W11 494 aa10.55□□□□□ -0.72
USP13-203ENST00000496897 P3H3Q8IVL6 736 aa10.55□□□□□ -0.72
USP13-203ENST00000496897 DNAJC2Q99543 621 aaKnown RBP10.55□□□□□ -0.72
USP13-203ENST00000496897 CEP170Q5SW79 1584 aa10.54□□□□□ -0.72
USP13-203ENST00000496897 PATL2C9JE40 543 aaKnown RBP10.54□□□□□ -0.72
USP13-203ENST00000496897 SOX12O15370 315 aa10.54□□□□□ -0.72
USP13-203ENST00000496897 SLKQ9H2G2 1235 aaPredicted RBP10.53□□□□□ -0.72
USP13-203ENST00000496897 CHMP4CQ96CF2 233 aa10.52□□□□□ -0.72
USP13-203ENST00000496897 MSNP26038 577 aaKnown RBP10.52□□□□□ -0.73
USP13-203ENST00000496897 TMED8Q6PL24 325 aaPredicted RBP10.52□□□□□ -0.73
USP13-203ENST00000496897 CUL7Q14999 1698 aa10.51□□□□□ -0.73
USP13-203ENST00000496897 KCNJ4P48050 445 aa10.51□□□□□ -0.73
USP13-203ENST00000496897 ISY1Q9ULR0 285 aaKnown RBP10.51□□□□□ -0.73
USP13-203ENST00000496897 CLIP1P30622 1438 aa10.51□□□□□ -0.73
USP13-203ENST00000496897 FBLN2P98095 1184 aa10.5□□□□□ -0.73
USP13-203ENST00000496897 FAM161AQ3B820 660 aa10.5□□□□□ -0.73
USP13-203ENST00000496897 ZNF622Q969S3 477 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP13-203ENST00000496897 RRP1P56182 461 aaKnown RBP10.49□□□□□ -0.73
USP13-203ENST00000496897 C8orf34Q49A92 452 aa10.49□□□□□ -0.73
USP13-203ENST00000496897 ZBTB9Q96C00 473 aa10.49□□□□□ -0.73
USP13-203ENST00000496897 VPS8Q8N3P4 1428 aa10.49□□□□□ -0.73
USP13-203ENST00000496897 AXDND1Q5T1B0 1012 aaPredicted RBP10.49□□□□□ -0.73
USP13-203ENST00000496897 TRAK2O60296 914 aa10.49□□□□□ -0.73
USP13-203ENST00000496897 MCM4P33991 863 aa10.49□□□□□ -0.73
USP13-203ENST00000496897 PRKRIP1Q9H875 184 aaPredicted RBP10.49□□□□□ -0.73
USP13-203ENST00000496897 PTMAP06454 111 aaKnown RBP10.48□□□□□ -0.73
USP13-203ENST00000496897 IGSF3O75054 1194 aa10.48□□□□□ -0.73
USP13-203ENST00000496897 BECN1Q14457 450 aa10.48□□□□□ -0.73
USP13-203ENST00000496897 ANTXR1Q9H6X2 564 aa10.48□□□□□ -0.73
USP13-203ENST00000496897 PHLDB1Q86UU1 1377 aa10.47□□□□□ -0.73
USP13-203ENST00000496897 PTMSP20962 102 aa10.47□□□□□ -0.73
USP13-203ENST00000496897 ATP2B3Q16720 1220 aa10.47□□□□□ -0.73
USP13-203ENST00000496897 GRIPAP1Q4V328 841 aa10.47□□□□□ -0.73
USP13-203ENST00000496897 CYB5RLQ6IPT4 315 aa10.47□□□□□ -0.73
USP13-203ENST00000496897 RAB3GAP2Q9H2M9 1393 aa10.46□□□□□ -0.73
USP13-203ENST00000496897 CCDC173Q0VFZ6 552 aa10.45□□□□□ -0.74
USP13-203ENST00000496897 ZNF771Q7L3S4 317 aaPredicted RBP10.45□□□□□ -0.74
USP13-203ENST00000496897 POLR3GLQ9BT43 218 aa10.45□□□□□ -0.74
USP13-203ENST00000496897 GEMIN8Q9NWZ8 242 aaKnown RBP10.45□□□□□ -0.74
USP13-203ENST00000496897 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
USP13-203ENST00000496897 YY1AP1Q9H869 796 aa10.45□□□□□ -0.74
USP13-203ENST00000496897 XPCQ01831 940 aaPredicted RBP10.44□□□□□ -0.74
USP13-203ENST00000496897 RALBP1Q15311 655 aa10.44□□□□□ -0.74
USP13-203ENST00000496897 SASS6Q6UVJ0 657 aa10.44□□□□□ -0.74
USP13-203ENST00000496897 GOLGA3Q08378 1498 aa10.44□□□□□ -0.74
USP13-203ENST00000496897 TRIM6-TRIM34B2RNG4 842 aa10.44□□□□□ -0.74
USP13-203ENST00000496897 FAM43BQ6ZT52 329 aaPredicted RBP10.44□□□□□ -0.74
USP13-203ENST00000496897 PPP1R9BQ96SB3 815 aa10.44□□□□□ -0.74
USP13-203ENST00000496897 TRIM34Q9BYJ4 488 aa10.44□□□□□ -0.74
USP13-203ENST00000496897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.43□□□□□ -0.74
USP13-203ENST00000496897 ZNF500O60304 480 aaPredicted RBP10.43□□□□□ -0.74
USP13-203ENST00000496897 CC2D1BQ5T0F9 858 aaKnown RBP10.43□□□□□ -0.74
USP13-203ENST00000496897 GAS2L3Q86XJ1 694 aa10.43□□□□□ -0.74
USP13-203ENST00000496897 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
USP13-203ENST00000496897 FBXO3Q9UK99 471 aa10.42□□□□□ -0.74
USP13-203ENST00000496897 ERCC6L2Q5T890 1561 aa10.42□□□□□ -0.74
USP13-203ENST00000496897 SENP3-EIF4A1A0A087X0R7 540 aa10.41□□□□□ -0.74
USP13-203ENST00000496897 KIAA0586Q9BVV6 1533 aa10.41□□□□□ -0.74
USP13-203ENST00000496897 RRBP1Q9P2E9 1410 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms