RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 ABCC2Q92887 1545 aa16.87■□□□□ 0.29
PDE6B-212ENST00000496514 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
PDE6B-212ENST00000496514 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
PDE6B-212ENST00000496514 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
PDE6B-212ENST00000496514 DHX29Q7Z478 1369 aaKnown RBP16.82■□□□□ 0.28
PDE6B-212ENST00000496514 SPAG9O60271 1321 aaKnown RBP16.82■□□□□ 0.28
PDE6B-212ENST00000496514 RSPH4AQ5TD94 716 aa16.82■□□□□ 0.28
PDE6B-212ENST00000496514 SHROOM2Q13796 1616 aa16.82■□□□□ 0.28
PDE6B-212ENST00000496514 ARHGEF5Q12774 1597 aa16.82■□□□□ 0.28
PDE6B-212ENST00000496514 PLA2R1Q13018 1463 aa16.81■□□□□ 0.28
PDE6B-212ENST00000496514 CC2D1BQ5T0F9 858 aaKnown RBP16.8■□□□□ 0.28
PDE6B-212ENST00000496514 TMC1Q8TDI8 760 aa16.8■□□□□ 0.28
PDE6B-212ENST00000496514 ZCCHC11Q5TAX3 1644 aaKnown RBP16.8■□□□□ 0.28
PDE6B-212ENST00000496514 KDM5CP41229 1560 aa16.79■□□□□ 0.28
PDE6B-212ENST00000496514 KIF3BO15066 747 aa16.78■□□□□ 0.28
PDE6B-212ENST00000496514 PLCH2O75038 1416 aa16.78■□□□□ 0.28
PDE6B-212ENST00000496514 ANP32EQ9BTT0 268 aa16.78■□□□□ 0.28
PDE6B-212ENST00000496514 RALGAPBQ86X10 1494 aa16.77■□□□□ 0.28
PDE6B-212ENST00000496514 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.28
PDE6B-212ENST00000496514 B4GALNT3Q6L9W6 998 aa16.74■□□□□ 0.27
PDE6B-212ENST00000496514 UHRF1BP1Q6BDS2 1440 aa16.74■□□□□ 0.27
PDE6B-212ENST00000496514 A2MP01023 1474 aa16.74■□□□□ 0.27
PDE6B-212ENST00000496514 SCAPERQ9BY12 1400 aa16.74■□□□□ 0.27
PDE6B-212ENST00000496514 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
PDE6B-212ENST00000496514 CLASP1Q7Z460 1538 aa16.73■□□□□ 0.27
PDE6B-212ENST00000496514 PRAG1Q86YV5 1406 aa16.73■□□□□ 0.27
PDE6B-212ENST00000496514 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
PDE6B-212ENST00000496514 DISP3Q9P2K9 1392 aa16.72■□□□□ 0.27
PDE6B-212ENST00000496514 ZBED9Q6R2W3 1325 aa16.7■□□□□ 0.26
PDE6B-212ENST00000496514 PANK3Q9H999 370 aa16.69■□□□□ 0.26
PDE6B-212ENST00000496514 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
PDE6B-212ENST00000496514 GGT6Q6P531 493 aa16.67■□□□□ 0.26
PDE6B-212ENST00000496514 NUTM2DQ5VT03 806 aaPredicted RBP16.67■□□□□ 0.26
PDE6B-212ENST00000496514 TESK2Q96S53 571 aa16.67■□□□□ 0.26
PDE6B-212ENST00000496514 FANCAO15360 1455 aa16.67■□□□□ 0.26
PDE6B-212ENST00000496514 ABCC1P33527 1531 aa16.67■□□□□ 0.26
PDE6B-212ENST00000496514 DUOX2Q9NRD8 1548 aa16.67■□□□□ 0.26
PDE6B-212ENST00000496514 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
PDE6B-212ENST00000496514 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.25
PDE6B-212ENST00000496514 RBM19Q9Y4C8 960 aaKnown RBP16.64■□□□□ 0.25
PDE6B-212ENST00000496514 ASXL2Q76L83 1435 aa16.64■□□□□ 0.25
PDE6B-212ENST00000496514 POLR1AO95602 1720 aaPredicted RBP16.64■□□□□ 0.25
PDE6B-212ENST00000496514 UNC13BO14795 1591 aa16.63■□□□□ 0.25
PDE6B-212ENST00000496514 ADGRL1O94910 1474 aa16.62■□□□□ 0.25
PDE6B-212ENST00000496514 CFAP70Q5T0N1 1121 aa16.62■□□□□ 0.25
PDE6B-212ENST00000496514 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
PDE6B-212ENST00000496514 UGGT1Q9NYU2 1555 aa16.62■□□□□ 0.25
PDE6B-212ENST00000496514 MAST1Q9Y2H9 1570 aa16.62■□□□□ 0.25
PDE6B-212ENST00000496514 ERBINQ96RT1 1412 aa16.62■□□□□ 0.25
PDE6B-212ENST00000496514 MYBBP1AQ9BQG0 1328 aaKnown RBP16.62■□□□□ 0.25
PDE6B-212ENST00000496514 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
PDE6B-212ENST00000496514 RAPGEF3O95398 923 aa16.61■□□□□ 0.25
PDE6B-212ENST00000496514 TMF1P82094 1093 aa16.61■□□□□ 0.25
PDE6B-212ENST00000496514 PLXNC1O60486 1568 aa16.61■□□□□ 0.25
PDE6B-212ENST00000496514 TRPM1Q7Z4N2 1603 aa16.6■□□□□ 0.25
PDE6B-212ENST00000496514 IQGAP3Q86VI3 1631 aa16.6■□□□□ 0.25
PDE6B-212ENST00000496514 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
PDE6B-212ENST00000496514 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
PDE6B-212ENST00000496514 ARID4BQ4LE39 1312 aaPredicted RBP16.59■□□□□ 0.25
PDE6B-212ENST00000496514 KTN1Q86UP2 1357 aaKnown RBP16.59■□□□□ 0.25
PDE6B-212ENST00000496514 CDCA7LQ96GN5 454 aa16.58■□□□□ 0.25
PDE6B-212ENST00000496514 NUDCQ9Y266 331 aa16.58■□□□□ 0.24
PDE6B-212ENST00000496514 ZFYVE16Q7Z3T8 1539 aa16.58■□□□□ 0.24
PDE6B-212ENST00000496514 ADGRF5Q8IZF2 1346 aa16.58■□□□□ 0.24
PDE6B-212ENST00000496514 ATP10AO60312 1499 aa16.57■□□□□ 0.24
PDE6B-212ENST00000496514 RALBP1Q15311 655 aa16.56■□□□□ 0.24
PDE6B-212ENST00000496514 ANO8Q9HCE9 1232 aaPredicted RBP16.56■□□□□ 0.24
PDE6B-212ENST00000496514 PPP4R2Q9NY27 417 aa16.56■□□□□ 0.24
PDE6B-212ENST00000496514 E9PCH4 1651 aa16.56■□□□□ 0.24
PDE6B-212ENST00000496514 NLRP13Q86W25 1043 aa16.55■□□□□ 0.24
PDE6B-212ENST00000496514 KANK1Q14678 1352 aa16.54■□□□□ 0.24
PDE6B-212ENST00000496514 ATP7AQ04656 1500 aa16.54■□□□□ 0.24
PDE6B-212ENST00000496514 TMEM132EQ6IEE7 984 aa16.53■□□□□ 0.24
PDE6B-212ENST00000496514 CYB5RLQ6IPT4 315 aa16.53■□□□□ 0.24
PDE6B-212ENST00000496514 GPRASP1Q5JY77 1395 aa16.52■□□□□ 0.24
PDE6B-212ENST00000496514 MAGI2Q86UL8 1455 aa16.52■□□□□ 0.23
PDE6B-212ENST00000496514 COL17A1Q9UMD9 1497 aaPredicted RBP16.52■□□□□ 0.23
PDE6B-212ENST00000496514 KNSTRNQ9Y448 316 aa16.51■□□□□ 0.23
PDE6B-212ENST00000496514 TRAK1Q9UPV9 953 aa16.51■□□□□ 0.23
PDE6B-212ENST00000496514 PLIN1O60240 522 aa16.51■□□□□ 0.23
PDE6B-212ENST00000496514 TNNT2P45379 298 aaPredicted RBP16.51■□□□□ 0.23
PDE6B-212ENST00000496514 CLTCL1P53675 1640 aa16.51■□□□□ 0.23
PDE6B-212ENST00000496514 BRD4O60885 1362 aaPredicted RBP16.5■□□□□ 0.23
PDE6B-212ENST00000496514 SAFB2Q14151 953 aaKnown RBP eCLIP16.5■□□□□ 0.23
PDE6B-212ENST00000496514 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
PDE6B-212ENST00000496514 PARD3Q8TEW0 1356 aa16.49■□□□□ 0.23
PDE6B-212ENST00000496514 CD109Q6YHK3 1445 aa16.49■□□□□ 0.23
PDE6B-212ENST00000496514 PRDM15P57071 1507 aaPredicted RBP16.49■□□□□ 0.23
PDE6B-212ENST00000496514 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
PDE6B-212ENST00000496514 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
PDE6B-212ENST00000496514 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
PDE6B-212ENST00000496514 RTEL1-TNFRSF6BF6WH68 1400 aa16.48■□□□□ 0.23
PDE6B-212ENST00000496514 CCDC136Q96JN2 1154 aa16.47■□□□□ 0.23
PDE6B-212ENST00000496514 WASHC2CQ9Y4E1 1318 aa16.47■□□□□ 0.23
PDE6B-212ENST00000496514 LRPPRCP42704 1394 aaKnown RBP16.46■□□□□ 0.22
PDE6B-212ENST00000496514 ABCA9Q8IUA7 1624 aa16.44■□□□□ 0.22
PDE6B-212ENST00000496514 EXOC6Q8TAG9 804 aa16.44■□□□□ 0.22
PDE6B-212ENST00000496514 TRPM2O94759 1503 aa16.43■□□□□ 0.22
PDE6B-212ENST00000496514 PPP2R1AP30153 589 aa16.43■□□□□ 0.22
PDE6B-212ENST00000496514 MADDQ8WXG6 1647 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms