RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
RNF220-217ENST00000496262 KDM5DQ9BY66 1539 aa17.18■□□□□ 0.34
RNF220-217ENST00000496262 PLA2R1Q13018 1463 aa17.17■□□□□ 0.34
RNF220-217ENST00000496262 A2ML1A8K2U0 1454 aa17.16■□□□□ 0.34
RNF220-217ENST00000496262 ZNF335Q9H4Z2 1342 aaPredicted RBP17.16■□□□□ 0.34
RNF220-217ENST00000496262 TNRQ92752 1358 aa17.15■□□□□ 0.34
RNF220-217ENST00000496262 MYOM3Q5VTT5 1437 aa17.15■□□□□ 0.34
RNF220-217ENST00000496262 PKD2Q13563 968 aa17.15■□□□□ 0.34
RNF220-217ENST00000496262 PZPP20742 1482 aa17.14■□□□□ 0.33
RNF220-217ENST00000496262 TCOF1Q13428 1488 aaKnown RBP17.14■□□□□ 0.33
RNF220-217ENST00000496262 MAP3K1Q13233 1512 aa17.14■□□□□ 0.33
RNF220-217ENST00000496262 DNMT1P26358 1616 aaKnown RBP17.13■□□□□ 0.33
RNF220-217ENST00000496262 APLP2Q06481 763 aa17.12■□□□□ 0.33
RNF220-217ENST00000496262 FAM135AQ9P2D6 1515 aa17.11■□□□□ 0.33
RNF220-217ENST00000496262 MIA2Q96PC5 1412 aa17.11■□□□□ 0.33
RNF220-217ENST00000496262 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
RNF220-217ENST00000496262 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
RNF220-217ENST00000496262 ABCC3O15438 1527 aa17.07■□□□□ 0.32
RNF220-217ENST00000496262 IQSEC2Q5JU85 1478 aa17.07■□□□□ 0.32
RNF220-217ENST00000496262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.07■□□□□ 0.32
RNF220-217ENST00000496262 UBAP1LF5GYI3 381 aa17.05■□□□□ 0.32
RNF220-217ENST00000496262 EIF2AK4Q9P2K8 1649 aaKnown RBP17.05■□□□□ 0.32
RNF220-217ENST00000496262 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
RNF220-217ENST00000496262 DISP3Q9P2K9 1392 aa17.04■□□□□ 0.32
RNF220-217ENST00000496262 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
RNF220-217ENST00000496262 NEURL4Q96JN8 1562 aa17.04■□□□□ 0.32
RNF220-217ENST00000496262 UGGT1Q9NYU2 1555 aa17.04■□□□□ 0.32
RNF220-217ENST00000496262 RRP7BPQ9NSQ0 103 aa17.04■□□□□ 0.32
RNF220-217ENST00000496262 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
RNF220-217ENST00000496262 ZC3H13Q5T200 1668 aaKnown RBP17.04■□□□□ 0.32
RNF220-217ENST00000496262 KIF15Q9NS87 1388 aa17.03■□□□□ 0.32
RNF220-217ENST00000496262 DUOX2Q9NRD8 1548 aa17.03■□□□□ 0.32
RNF220-217ENST00000496262 ANKLE2Q86XL3 938 aa17.03■□□□□ 0.32
RNF220-217ENST00000496262 MROH1Q8NDA8 1641 aa17.03■□□□□ 0.32
RNF220-217ENST00000496262 THEMISQ8N1K5 641 aaPredicted RBP17.02■□□□□ 0.32
RNF220-217ENST00000496262 ABCC5O15440 1437 aa17.02■□□□□ 0.31
RNF220-217ENST00000496262 CEP152O94986 1710 aa17.01■□□□□ 0.31
RNF220-217ENST00000496262 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
RNF220-217ENST00000496262 ERVK-7P63135 1459 aa17.01■□□□□ 0.31
RNF220-217ENST00000496262 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
RNF220-217ENST00000496262 DAPK1P53355 1430 aa17■□□□□ 0.31
RNF220-217ENST00000496262 SPATA31D1Q6ZQQ2 1576 aa17■□□□□ 0.31
RNF220-217ENST00000496262 FGD6Q6ZV73 1430 aa17■□□□□ 0.31
RNF220-217ENST00000496262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
RNF220-217ENST00000496262 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
RNF220-217ENST00000496262 CHIC2Q9UKJ5 165 aa17■□□□□ 0.31
RNF220-217ENST00000496262 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
RNF220-217ENST00000496262 NPHP4O75161 1426 aaPredicted RBP16.98■□□□□ 0.31
RNF220-217ENST00000496262 ERBINQ96RT1 1412 aa16.97■□□□□ 0.31
RNF220-217ENST00000496262 PRDM15P57071 1507 aaPredicted RBP16.96■□□□□ 0.3
RNF220-217ENST00000496262 PIP4K2BP78356 416 aa16.95■□□□□ 0.3
RNF220-217ENST00000496262 CPS1P31327 1500 aa16.95■□□□□ 0.3
RNF220-217ENST00000496262 VWDEQ8N2E2 1590 aa16.94■□□□□ 0.3
RNF220-217ENST00000496262 DEPDC5O75140 1603 aa16.93■□□□□ 0.3
RNF220-217ENST00000496262 ANKRD30AQ9BXX3 1397 aa16.93■□□□□ 0.3
RNF220-217ENST00000496262 FAM50AQ14320 339 aaKnown RBP16.93■□□□□ 0.3
RNF220-217ENST00000496262 ILDR2Q71H61 639 aa16.93■□□□□ 0.3
RNF220-217ENST00000496262 IQGAP1P46940 1657 aa16.93■□□□□ 0.3
RNF220-217ENST00000496262 MED14O60244 1454 aa16.93■□□□□ 0.3
RNF220-217ENST00000496262 KANK1Q14678 1352 aa16.92■□□□□ 0.3
RNF220-217ENST00000496262 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
RNF220-217ENST00000496262 UBR1Q8IWV7 1749 aa16.9■□□□□ 0.3
RNF220-217ENST00000496262 ARHGAP31Q2M1Z3 1444 aa16.89■□□□□ 0.29
RNF220-217ENST00000496262 TOM1O60784 492 aa16.89■□□□□ 0.29
RNF220-217ENST00000496262 SCAF11Q99590 1463 aaKnown RBP16.88■□□□□ 0.29
RNF220-217ENST00000496262 STAG3Q9UJ98 1225 aa16.88■□□□□ 0.29
RNF220-217ENST00000496262 HSPA1LP34931 641 aa16.87■□□□□ 0.29
RNF220-217ENST00000496262 TXNDC2Q86VQ3 553 aa16.87■□□□□ 0.29
RNF220-217ENST00000496262 PIK3C2BO00750 1634 aa16.86■□□□□ 0.29
RNF220-217ENST00000496262 LTKP29376 864 aa16.86■□□□□ 0.29
RNF220-217ENST00000496262 EID1Q9Y6B2 187 aa16.84■□□□□ 0.29
RNF220-217ENST00000496262 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
RNF220-217ENST00000496262 SLIT1O75093 1534 aa16.83■□□□□ 0.28
RNF220-217ENST00000496262 ADGRL2O95490 1459 aa16.83■□□□□ 0.28
RNF220-217ENST00000496262 LRRC7Q96NW7 1537 aa16.83■□□□□ 0.28
RNF220-217ENST00000496262 ARHGAP23Q9P227 1491 aa16.83■□□□□ 0.28
RNF220-217ENST00000496262 LMTK2Q8IWU2 1503 aa16.82■□□□□ 0.28
RNF220-217ENST00000496262 EFCAB6Q5THR3 1501 aa16.81■□□□□ 0.28
RNF220-217ENST00000496262 TMEM2Q9UHN6 1383 aa16.81■□□□□ 0.28
RNF220-217ENST00000496262 IDI1Q13907 227 aa16.81■□□□□ 0.28
RNF220-217ENST00000496262 SYNMO15061 1565 aa16.81■□□□□ 0.28
RNF220-217ENST00000496262 ANKRD50Q9ULJ7 1429 aa16.8■□□□□ 0.28
RNF220-217ENST00000496262 ALKQ9UM73 1620 aa16.79■□□□□ 0.28
RNF220-217ENST00000496262 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
RNF220-217ENST00000496262 SOCS7O14512 581 aa16.78■□□□□ 0.28
RNF220-217ENST00000496262 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
RNF220-217ENST00000496262 NOS1P29475 1434 aa16.77■□□□□ 0.27
RNF220-217ENST00000496262 ITGAEP38570 1179 aa16.76■□□□□ 0.27
RNF220-217ENST00000496262 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
RNF220-217ENST00000496262 BCANQ96GW7 911 aa16.75■□□□□ 0.27
RNF220-217ENST00000496262 MED1Q15648 1581 aaPredicted RBP16.74■□□□□ 0.27
RNF220-217ENST00000496262 SLC26A8Q96RN1 970 aa16.74■□□□□ 0.27
RNF220-217ENST00000496262 KDM5AP29375 1690 aaKnown RBP16.72■□□□□ 0.27
RNF220-217ENST00000496262 SLC52A1Q9NWF4 448 aa16.72■□□□□ 0.27
RNF220-217ENST00000496262 RPRD2Q5VT52 1461 aaKnown RBP16.72■□□□□ 0.27
RNF220-217ENST00000496262 RBM33Q96EV2 1170 aaKnown RBP16.71■□□□□ 0.27
RNF220-217ENST00000496262 TET3O43151 1660 aa16.71■□□□□ 0.27
RNF220-217ENST00000496262 UNC13BO14795 1591 aa16.7■□□□□ 0.26
RNF220-217ENST00000496262 CHGAP10645 457 aaKnown RBP16.7■□□□□ 0.26
RNF220-217ENST00000496262 TMEM94Q12767 1356 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms