RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 KIAA1107Q9UPP5 1409 aa16.54■□□□□ 0.24
ERGIC3-219ENST00000496172 SPAG9O60271 1321 aaKnown RBP16.53■□□□□ 0.24
ERGIC3-219ENST00000496172 VWDEQ8N2E2 1590 aa16.53■□□□□ 0.24
ERGIC3-219ENST00000496172 HNRNPMP52272 730 aaKnown RBP eCLIP16.53■□□□□ 0.24
ERGIC3-219ENST00000496172 FAM135AQ9P2D6 1515 aa16.52■□□□□ 0.24
ERGIC3-219ENST00000496172 TIAM1Q13009 1591 aa16.51■□□□□ 0.23
ERGIC3-219ENST00000496172 DEPDC5O75140 1603 aa16.5■□□□□ 0.23
ERGIC3-219ENST00000496172 APLP2Q06481 763 aa16.5■□□□□ 0.23
ERGIC3-219ENST00000496172 PIP4K2BP78356 416 aa16.49■□□□□ 0.23
ERGIC3-219ENST00000496172 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
ERGIC3-219ENST00000496172 MED14O60244 1454 aa16.48■□□□□ 0.23
ERGIC3-219ENST00000496172 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
ERGIC3-219ENST00000496172 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
ERGIC3-219ENST00000496172 SYNMO15061 1565 aa16.47■□□□□ 0.23
ERGIC3-219ENST00000496172 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
ERGIC3-219ENST00000496172 RNF17Q9BXT8 1623 aaKnown RBP16.47■□□□□ 0.23
ERGIC3-219ENST00000496172 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
ERGIC3-219ENST00000496172 ZNF644Q9H582 1327 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-219ENST00000496172 PZPP20742 1482 aa16.45■□□□□ 0.22
ERGIC3-219ENST00000496172 TNRQ92752 1358 aa16.43■□□□□ 0.22
ERGIC3-219ENST00000496172 RSPH4AQ5TD94 716 aa16.43■□□□□ 0.22
ERGIC3-219ENST00000496172 GGT6Q6P531 493 aa16.43■□□□□ 0.22
ERGIC3-219ENST00000496172 KDM5DQ9BY66 1539 aa16.43■□□□□ 0.22
ERGIC3-219ENST00000496172 IQGAP1P46940 1657 aa16.43■□□□□ 0.22
ERGIC3-219ENST00000496172 NLRP1Q9C000 1473 aa16.42■□□□□ 0.22
ERGIC3-219ENST00000496172 KANK4Q5T7N3 995 aaPredicted RBP16.42■□□□□ 0.22
ERGIC3-219ENST00000496172 STRCP1A6NGW2 1772 aa16.41■□□□□ 0.22
ERGIC3-219ENST00000496172 RTEL1-TNFRSF6BF6WH68 1400 aa16.41■□□□□ 0.22
ERGIC3-219ENST00000496172 NPHP4O75161 1426 aaPredicted RBP16.4■□□□□ 0.22
ERGIC3-219ENST00000496172 MBD5Q9P267 1494 aa16.4■□□□□ 0.22
ERGIC3-219ENST00000496172 CAMSAP2Q08AD1 1489 aa16.39■□□□□ 0.21
ERGIC3-219ENST00000496172 LRRC7Q96NW7 1537 aa16.39■□□□□ 0.21
ERGIC3-219ENST00000496172 UGGT1Q9NYU2 1555 aa16.38■□□□□ 0.21
ERGIC3-219ENST00000496172 ANKLE2Q86XL3 938 aa16.38■□□□□ 0.21
ERGIC3-219ENST00000496172 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
ERGIC3-219ENST00000496172 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
ERGIC3-219ENST00000496172 DHX29Q7Z478 1369 aaKnown RBP16.37■□□□□ 0.21
ERGIC3-219ENST00000496172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.37■□□□□ 0.21
ERGIC3-219ENST00000496172 CCDC141Q6ZP82 1450 aa16.36■□□□□ 0.21
ERGIC3-219ENST00000496172 ZC3H13Q5T200 1668 aaKnown RBP16.36■□□□□ 0.21
ERGIC3-219ENST00000496172 THEMISQ8N1K5 641 aaPredicted RBP16.35■□□□□ 0.21
ERGIC3-219ENST00000496172 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
ERGIC3-219ENST00000496172 MIA2Q96PC5 1412 aa16.35■□□□□ 0.21
ERGIC3-219ENST00000496172 MYOM3Q5VTT5 1437 aa16.34■□□□□ 0.21
ERGIC3-219ENST00000496172 FBXO31Q5XUX0 539 aaPredicted RBP16.32■□□□□ 0.2
ERGIC3-219ENST00000496172 ARHGEF5Q12774 1597 aa16.31■□□□□ 0.2
ERGIC3-219ENST00000496172 XIRP1Q702N8 1843 aaKnown RBP16.31■□□□□ 0.2
ERGIC3-219ENST00000496172 KIF3BO15066 747 aa16.26■□□□□ 0.19
ERGIC3-219ENST00000496172 UBR1Q8IWV7 1749 aa16.25■□□□□ 0.19
ERGIC3-219ENST00000496172 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
ERGIC3-219ENST00000496172 FAM135BQ49AJ0 1406 aa16.25■□□□□ 0.19
ERGIC3-219ENST00000496172 ABCC3O15438 1527 aa16.24■□□□□ 0.19
ERGIC3-219ENST00000496172 SCAF11Q99590 1463 aaKnown RBP16.23■□□□□ 0.19
ERGIC3-219ENST00000496172 SLIT1O75093 1534 aa16.23■□□□□ 0.19
ERGIC3-219ENST00000496172 ERVK-7P63135 1459 aa16.22■□□□□ 0.19
ERGIC3-219ENST00000496172 ARHGAP23Q9P227 1491 aa16.22■□□□□ 0.19
ERGIC3-219ENST00000496172 MAST1Q9Y2H9 1570 aa16.22■□□□□ 0.19
ERGIC3-219ENST00000496172 PTPN23Q9H3S7 1636 aa16.22■□□□□ 0.19
ERGIC3-219ENST00000496172 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.19
ERGIC3-219ENST00000496172 EIF2AK4Q9P2K8 1649 aaKnown RBP16.21■□□□□ 0.19
ERGIC3-219ENST00000496172 POTEAQ6S8J7 498 aa16.21■□□□□ 0.19
ERGIC3-219ENST00000496172 SETD1AO15047 1707 aaKnown RBP16.2■□□□□ 0.18
ERGIC3-219ENST00000496172 MROH1Q8NDA8 1641 aa16.18■□□□□ 0.18
ERGIC3-219ENST00000496172 ABCC5O15440 1437 aa16.18■□□□□ 0.18
ERGIC3-219ENST00000496172 ROBO1Q9Y6N7 1651 aa16.18■□□□□ 0.18
ERGIC3-219ENST00000496172 SENP3Q9H4L4 574 aaPredicted RBP16.17■□□□□ 0.18
ERGIC3-219ENST00000496172 RRP7BPQ9NSQ0 103 aa16.16■□□□□ 0.18
ERGIC3-219ENST00000496172 DAPK1P53355 1430 aa16.16■□□□□ 0.18
ERGIC3-219ENST00000496172 DUOX2Q9NRD8 1548 aa16.15■□□□□ 0.18
ERGIC3-219ENST00000496172 FAM50AQ14320 339 aaKnown RBP16.15■□□□□ 0.18
ERGIC3-219ENST00000496172 KDM5AP29375 1690 aaKnown RBP16.14■□□□□ 0.18
ERGIC3-219ENST00000496172 KIF15Q9NS87 1388 aa16.14■□□□□ 0.17
ERGIC3-219ENST00000496172 CEP152O94986 1710 aa16.14■□□□□ 0.17
ERGIC3-219ENST00000496172 CROCC2H7BZ55 1655 aa16.13■□□□□ 0.17
ERGIC3-219ENST00000496172 ANKRD30AQ9BXX3 1397 aa16.13■□□□□ 0.17
ERGIC3-219ENST00000496172 CHIC2Q9UKJ5 165 aa16.12■□□□□ 0.17
ERGIC3-219ENST00000496172 ARHGAP31Q2M1Z3 1444 aa16.11■□□□□ 0.17
ERGIC3-219ENST00000496172 ERBINQ96RT1 1412 aa16.11■□□□□ 0.17
ERGIC3-219ENST00000496172 NWD1Q149M9 1564 aa16.1■□□□□ 0.17
ERGIC3-219ENST00000496172 LTKP29376 864 aa16.1■□□□□ 0.17
ERGIC3-219ENST00000496172 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
ERGIC3-219ENST00000496172 TMEM94Q12767 1356 aa16.09■□□□□ 0.17
ERGIC3-219ENST00000496172 PRDM15P57071 1507 aaPredicted RBP16.09■□□□□ 0.17
ERGIC3-219ENST00000496172 CFAP65Q6ZU64 1925 aaKnown RBP16.08■□□□□ 0.16
ERGIC3-219ENST00000496172 PIK3C2BO00750 1634 aa16.08■□□□□ 0.16
ERGIC3-219ENST00000496172 PHLPP1O60346 1717 aa16.08■□□□□ 0.16
ERGIC3-219ENST00000496172 TXNDC2Q86VQ3 553 aa16.07■□□□□ 0.16
ERGIC3-219ENST00000496172 TET3O43151 1660 aa16.06■□□□□ 0.16
ERGIC3-219ENST00000496172 KANK1Q14678 1352 aa16.06■□□□□ 0.16
ERGIC3-219ENST00000496172 JCADQ9P266 1359 aa16.06■□□□□ 0.16
ERGIC3-219ENST00000496172 TMEM2Q9UHN6 1383 aa16.06■□□□□ 0.16
ERGIC3-219ENST00000496172 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
ERGIC3-219ENST00000496172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.162e-10■■□□□ 13.5
ERGIC3-219ENST00000496172 COL16A1Q07092 1604 aaPredicted RBP16.05■□□□□ 0.16
ERGIC3-219ENST00000496172 EID1Q9Y6B2 187 aa16.04■□□□□ 0.16
ERGIC3-219ENST00000496172 ADGRL2O95490 1459 aa16.03■□□□□ 0.16
ERGIC3-219ENST00000496172 KCNA6P17658 529 aa16.03■□□□□ 0.16
ERGIC3-219ENST00000496172 EFCAB6Q5THR3 1501 aa16.03■□□□□ 0.16
ERGIC3-219ENST00000496172 UPF1Q92900 1129 aaKnown RBP eCLIP16.02■□□□□ 0.16
ERGIC3-219ENST00000496172 SHPRHQ149N8 1683 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms