RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 IRX5P78411 483 aaPredicted RBP8.8□□□□□ -1
XPA-204ENST00000496104 ALKQ9UM73 1620 aa8.8□□□□□ -1
XPA-204ENST00000496104 TMEM106CQ9BVX2 250 aa8.79□□□□□ -1
XPA-204ENST00000496104 SETD1AO15047 1707 aaKnown RBP8.77□□□□□ -1
XPA-204ENST00000496104 ARHGEF12Q9NZN5 1544 aa8.77□□□□□ -1.01
XPA-204ENST00000496104 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
XPA-204ENST00000496104 IFNL1Q8IU54 200 aa8.77□□□□□ -1.01
XPA-204ENST00000496104 RICTORQ6R327 1708 aa8.77□□□□□ -1.01
XPA-204ENST00000496104 PROM2Q8N271 834 aa8.76□□□□□ -1.01
XPA-204ENST00000496104 KRTAP3-3Q9BYR6 98 aa8.76□□□□□ -1.01
XPA-204ENST00000496104 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
XPA-204ENST00000496104 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.76□□□□□ -1.01
XPA-204ENST00000496104 ARID4BQ4LE39 1312 aaPredicted RBP8.76□□□□□ -1.01
XPA-204ENST00000496104 UBAP1LF5GYI3 381 aa8.75□□□□□ -1.01
XPA-204ENST00000496104 EMP3P54852 163 aa8.75□□□□□ -1.01
XPA-204ENST00000496104 MIER1Q8N108 512 aa8.75□□□□□ -1.01
XPA-204ENST00000496104 IQGAP2Q13576 1575 aa8.74□□□□□ -1.01
XPA-204ENST00000496104 NCOA1Q15788 1441 aa8.74□□□□□ -1.01
XPA-204ENST00000496104 CARMIL2Q6F5E8 1435 aa8.74□□□□□ -1.01
XPA-204ENST00000496104 ABCA9Q8IUA7 1624 aa8.74□□□□□ -1.01
XPA-204ENST00000496104 OCEL1Q9H607 264 aa8.73□□□□□ -1.01
XPA-204ENST00000496104 ZNF335Q9H4Z2 1342 aaPredicted RBP8.73□□□□□ -1.01
XPA-204ENST00000496104 KIAA0556O60303 1618 aa8.72□□□□□ -1.01
XPA-204ENST00000496104 POTEB3A0JP26 581 aa8.72□□□□□ -1.01
XPA-204ENST00000496104 CEBPAP49715 358 aaPredicted RBP8.72□□□□□ -1.01
XPA-204ENST00000496104 POTEBQ6S5H4 581 aa8.72□□□□□ -1.01
XPA-204ENST00000496104 HS3ST6Q96QI5 342 aa8.72□□□□□ -1.01
XPA-204ENST00000496104 ABCA8O94911 1581 aa8.72□□□□□ -1.01
XPA-204ENST00000496104 IGF1RP08069 1367 aa8.72□□□□□ -1.01
XPA-204ENST00000496104 NEO1Q92859 1461 aa8.71□□□□□ -1.01
XPA-204ENST00000496104 ZMYM4Q5VZL5 1548 aa8.71□□□□□ -1.01
XPA-204ENST00000496104 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.02
XPA-204ENST00000496104 FANCAO15360 1455 aa8.7□□□□□ -1.02
XPA-204ENST00000496104 KCNH8Q96L42 1107 aa8.7□□□□□ -1.02
XPA-204ENST00000496104 UGGT2Q9NYU1 1516 aa8.7□□□□□ -1.02
XPA-204ENST00000496104 FAM205CA6NFA0 338 aa8.69□□□□□ -1.02
XPA-204ENST00000496104 PHLDB1Q86UU1 1377 aa8.69□□□□□ -1.02
XPA-204ENST00000496104 FHOD3Q2V2M9 1422 aa8.68□□□□□ -1.02
XPA-204ENST00000496104 POTEAQ6S8J7 498 aa8.67□□□□□ -1.02
XPA-204ENST00000496104 ZFYVE16Q7Z3T8 1539 aa8.66□□□□□ -1.02
XPA-204ENST00000496104 C3P01024 1663 aa8.65□□□□□ -1.02
XPA-204ENST00000496104 POGZQ7Z3K3 1410 aa8.65□□□□□ -1.02
XPA-204ENST00000496104 AKNAQ7Z591 1439 aa8.65□□□□□ -1.02
XPA-204ENST00000496104 SETD1BQ9UPS6 1966 aaKnown RBP8.64□□□□□ -1.03
XPA-204ENST00000496104 NUBP1P53384 320 aa8.64□□□□□ -1.03
XPA-204ENST00000496104 MLECQ14165 292 aa8.64□□□□□ -1.03
XPA-204ENST00000496104 CAMSAP1Q5T5Y3 1602 aa8.64□□□□□ -1.03
XPA-204ENST00000496104 EFCAB5A4FU69 1503 aa8.63□□□□□ -1.03
XPA-204ENST00000496104 DENND4BO75064 1496 aaPredicted RBP8.63□□□□□ -1.03
XPA-204ENST00000496104 HECW1Q76N89 1606 aa8.62□□□□□ -1.03
XPA-204ENST00000496104 PIP4K2BP78356 416 aa8.61□□□□□ -1.03
XPA-204ENST00000496104 PLCD3Q8N3E9 789 aa8.61□□□□□ -1.03
XPA-204ENST00000496104 TCOF1Q13428 1488 aaKnown RBP8.6□□□□□ -1.03
XPA-204ENST00000496104 C3orf67Q6ZVT6 689 aa8.6□□□□□ -1.03
XPA-204ENST00000496104 ATP10BO94823 1461 aa8.59□□□□□ -1.03
XPA-204ENST00000496104 FAM212AQ96EL1 285 aa8.59□□□□□ -1.03
XPA-204ENST00000496104 NCKAP5LQ9HCH0 1330 aa8.58□□□□□ -1.04
XPA-204ENST00000496104 MAGI2Q86UL8 1455 aa8.57□□□□□ -1.04
XPA-204ENST00000496104 PDCD7Q8N8D1 485 aaKnown RBP8.57□□□□□ -1.04
XPA-204ENST00000496104 UPF1Q92900 1129 aaKnown RBP eCLIP8.57□□□□□ -1.04
XPA-204ENST00000496104 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
XPA-204ENST00000496104 CARMIL1Q5VZK9 1371 aa8.57□□□□□ -1.04
XPA-204ENST00000496104 ZBTB47Q9UFB7 747 aaPredicted RBP8.56□□□□□ -1.04
XPA-204ENST00000496104 PLA2R1Q13018 1463 aa8.55□□□□□ -1.04
XPA-204ENST00000496104 ZNF142P52746 1687 aaPredicted RBP8.55□□□□□ -1.04
XPA-204ENST00000496104 C9orf84Q5VXU9 1444 aa8.54□□□□□ -1.04
XPA-204ENST00000496104 TRAPPC8Q9Y2L5 1435 aa8.54□□□□□ -1.04
XPA-204ENST00000496104 NEURL4Q96JN8 1562 aa8.54□□□□□ -1.04
XPA-204ENST00000496104 ATP10AO60312 1499 aa8.54□□□□□ -1.04
XPA-204ENST00000496104 RAPGEF2Q9Y4G8 1499 aa8.54□□□□□ -1.04
XPA-204ENST00000496104 L3MBTL3Q96JM7 780 aaPredicted RBP8.54□□□□□ -1.04
XPA-204ENST00000496104 CPS1P31327 1500 aa8.53□□□□□ -1.04
XPA-204ENST00000496104 VWDEQ8N2E2 1590 aa8.52□□□□□ -1.04
XPA-204ENST00000496104 ARID3CA6NKF2 412 aa8.52□□□□□ -1.05
XPA-204ENST00000496104 PCDHB8Q9UN66 801 aa8.52□□□□□ -1.05
XPA-204ENST00000496104 MYO3AQ8NEV4 1616 aa8.51□□□□□ -1.05
XPA-204ENST00000496104 KIF27Q86VH2 1401 aa8.51□□□□□ -1.05
XPA-204ENST00000496104 STRCP1A6NGW2 1772 aa8.5□□□□□ -1.05
XPA-204ENST00000496104 TOM1O60784 492 aa8.5□□□□□ -1.05
XPA-204ENST00000496104 PYGBP11216 843 aa8.5□□□□□ -1.05
XPA-204ENST00000496104 DIP2CQ9Y2E4 1556 aa8.5□□□□□ -1.05
XPA-204ENST00000496104 SHANK2Q9UPX8 1470 aa8.5□□□□□ -1.05
XPA-204ENST00000496104 CFAP74Q9C0B2 1584 aa8.49□□□□□ -1.05
XPA-204ENST00000496104 SETBP1Q9Y6X0 1596 aa8.49□□□□□ -1.05
XPA-204ENST00000496104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.49□□□□□ -1.05
XPA-204ENST00000496104 REREQ9P2R6 1566 aa8.48□□□□□ -1.05
XPA-204ENST00000496104 CEP170BQ9Y4F5 1589 aaPredicted RBP8.48□□□□□ -1.05
XPA-204ENST00000496104 NPATQ14207 1427 aa8.47□□□□□ -1.05
XPA-204ENST00000496104 PTPRKQ15262 1439 aa8.47□□□□□ -1.05
XPA-204ENST00000496104 MYT1LQ9UL68 1186 aa8.47□□□□□ -1.05
XPA-204ENST00000496104 ABCA6Q8N139 1617 aa8.47□□□□□ -1.05
XPA-204ENST00000496104 AGLP35573 1532 aa8.46□□□□□ -1.05
XPA-204ENST00000496104 LRRC7Q96NW7 1537 aa8.46□□□□□ -1.05
XPA-204ENST00000496104 HOXB3P14651 431 aaPredicted RBP8.46□□□□□ -1.06
XPA-204ENST00000496104 MKRN3Q13064 507 aaKnown RBP8.46□□□□□ -1.06
XPA-204ENST00000496104 KDM5CP41229 1560 aa8.46□□□□□ -1.06
XPA-204ENST00000496104 RNF17Q9BXT8 1623 aaKnown RBP8.46□□□□□ -1.06
XPA-204ENST00000496104 HOXB1P14653 301 aaPredicted RBP8.45□□□□□ -1.06
XPA-204ENST00000496104 ERBB3P21860 1342 aa8.45□□□□□ -1.06
XPA-204ENST00000496104 MROH2AA6NES4 1674 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms