RNA–Protein interactions for RNA: ENST00000495582.1

RGPD5-213, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-213ENST00000495582 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
RGPD5-213ENST00000495582 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
RGPD5-213ENST00000495582 PTPN5P54829 565 aa12.35□□□□□ -0.43
RGPD5-213ENST00000495582 EPAS1Q99814 870 aa12.35□□□□□ -0.43
RGPD5-213ENST00000495582 E2F4Q16254 413 aa12.34□□□□□ -0.43
RGPD5-213ENST00000495582 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
RGPD5-213ENST00000495582 COL9A1P20849 921 aa12.33□□□□□ -0.44
RGPD5-213ENST00000495582 PROX2Q3B8N5 592 aa12.33□□□□□ -0.44
RGPD5-213ENST00000495582 PLA2G2EQ9NZK7 142 aa12.32□□□□□ -0.44
RGPD5-213ENST00000495582 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
RGPD5-213ENST00000495582 WNT2BQ93097 391 aa12.31□□□□□ -0.44
RGPD5-213ENST00000495582 NBR1Q14596 966 aa12.3□□□□□ -0.44
RGPD5-213ENST00000495582 C6orf132Q5T0Z8 1188 aa12.3□□□□□ -0.44
RGPD5-213ENST00000495582 SPDYE16A6NNV3 312 aaPredicted RBP12.28□□□□□ -0.44
RGPD5-213ENST00000495582 PDIA6Q15084 440 aa12.28□□□□□ -0.44
RGPD5-213ENST00000495582 MAP3K7O43318 606 aa12.26□□□□□ -0.45
RGPD5-213ENST00000495582 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
RGPD5-213ENST00000495582 THSD4Q6ZMP0 1018 aa12.25□□□□□ -0.45
RGPD5-213ENST00000495582 GRXCR2A6NFK2 248 aa12.24□□□□□ -0.45
RGPD5-213ENST00000495582 KIAA1468Q9P260 1216 aa12.24□□□□□ -0.45
RGPD5-213ENST00000495582 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
RGPD5-213ENST00000495582 EN1Q05925 392 aaPredicted RBP12.21□□□□□ -0.45
RGPD5-213ENST00000495582 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
RGPD5-213ENST00000495582 ANKK1Q8NFD2 765 aa12.21□□□□□ -0.45
RGPD5-213ENST00000495582 SEPT9Q9UHD8 586 aaPredicted RBP12.2□□□□□ -0.46
RGPD5-213ENST00000495582 TRIM6-TRIM34B2RNG4 842 aa12.18□□□□□ -0.46
RGPD5-213ENST00000495582 LAPTM4BQ86VI4 370 aa12.16□□□□□ -0.46
RGPD5-213ENST00000495582 ARIH1Q9Y4X5 557 aaPredicted RBP12.16□□□□□ -0.46
RGPD5-213ENST00000495582 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
RGPD5-213ENST00000495582 BCAMP50895 628 aa12.15□□□□□ -0.46
RGPD5-213ENST00000495582 ZFRQ96KR1 1074 aaKnown RBP12.14□□□□□ -0.47
RGPD5-213ENST00000495582 PACS2Q86VP3 889 aa12.13□□□□□ -0.47
RGPD5-213ENST00000495582 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
RGPD5-213ENST00000495582 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
RGPD5-213ENST00000495582 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
RGPD5-213ENST00000495582 SOWAHBA6NEL2 793 aa12.09□□□□□ -0.47
RGPD5-213ENST00000495582 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
RGPD5-213ENST00000495582 OSBPP22059 807 aa12.08□□□□□ -0.48
RGPD5-213ENST00000495582 CERKQ8TCT0 537 aa12.08□□□□□ -0.48
RGPD5-213ENST00000495582 PRSS12P56730 875 aa12.07□□□□□ -0.48
RGPD5-213ENST00000495582 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
RGPD5-213ENST00000495582 SMAPO00193 183 aa12.06□□□□□ -0.48
RGPD5-213ENST00000495582 LRCH3Q96II8 777 aa12.06□□□□□ -0.48
RGPD5-213ENST00000495582 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
RGPD5-213ENST00000495582 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
RGPD5-213ENST00000495582 WBP1LQ9NX94 342 aa12.04□□□□□ -0.48
RGPD5-213ENST00000495582 ARHGEF1Q92888 912 aaKnown RBP12.03□□□□□ -0.48
RGPD5-213ENST00000495582 PNMA3Q9UL41 463 aa12.03□□□□□ -0.48
RGPD5-213ENST00000495582 HPS5Q9UPZ3 1129 aa12.03□□□□□ -0.48
RGPD5-213ENST00000495582 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.49
RGPD5-213ENST00000495582 NBPF26B4DH59 902 aa12.01□□□□□ -0.49
RGPD5-213ENST00000495582 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
RGPD5-213ENST00000495582 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
RGPD5-213ENST00000495582 TATDN2Q93075 761 aa11.99□□□□□ -0.49
RGPD5-213ENST00000495582 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
RGPD5-213ENST00000495582 PPP4CP60510 307 aa11.97□□□□□ -0.49
RGPD5-213ENST00000495582 NUDT18Q6ZVK8 323 aa11.97□□□□□ -0.49
RGPD5-213ENST00000495582 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
RGPD5-213ENST00000495582 RNF40O75150 1001 aa11.96□□□□□ -0.49
RGPD5-213ENST00000495582 HDGFP51858 240 aaKnown RBP11.96□□□□□ -0.49
RGPD5-213ENST00000495582 IFFO2Q5TF58 517 aa11.96□□□□□ -0.49
RGPD5-213ENST00000495582 C3orf80F5H4A9 247 aa11.95□□□□□ -0.5
RGPD5-213ENST00000495582 P3H3Q8IVL6 736 aa11.95□□□□□ -0.5
RGPD5-213ENST00000495582 PLCB2Q00722 1185 aa11.94□□□□□ -0.5
RGPD5-213ENST00000495582 PADI6Q6TGC4 694 aa11.94□□□□□ -0.5
RGPD5-213ENST00000495582 A0A0G2JS52 829 aa11.93□□□□□ -0.5
RGPD5-213ENST00000495582 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
RGPD5-213ENST00000495582 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
RGPD5-213ENST00000495582 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
RGPD5-213ENST00000495582 KCNC4Q03721 635 aa11.91□□□□□ -0.5
RGPD5-213ENST00000495582 NUTM2FA1L443 756 aa11.89□□□□□ -0.51
RGPD5-213ENST00000495582 SEMA3EO15041 775 aa11.86□□□□□ -0.51
RGPD5-213ENST00000495582 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
RGPD5-213ENST00000495582 RGS20O76081 388 aa11.84□□□□□ -0.51
RGPD5-213ENST00000495582 SWT1Q5T5J6 900 aaKnown RBP11.84□□□□□ -0.51
RGPD5-213ENST00000495582 TTC13Q8NBP0 860 aa11.84□□□□□ -0.51
RGPD5-213ENST00000495582 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
RGPD5-213ENST00000495582 PTGDRQ13258 359 aa11.82□□□□□ -0.52
RGPD5-213ENST00000495582 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
RGPD5-213ENST00000495582 NECTIN2Q92692 538 aa11.78□□□□□ -0.52
RGPD5-213ENST00000495582 EYA1Q99502 592 aa11.78□□□□□ -0.52
RGPD5-213ENST00000495582 MTRQ99707 1265 aa11.78□□□□□ -0.52
RGPD5-213ENST00000495582 APLP1P51693 650 aa11.77□□□□□ -0.53
RGPD5-213ENST00000495582 RBM46Q8TBY0 533 aaKnown RBP11.77□□□□□ -0.53
RGPD5-213ENST00000495582 FCHSD2O94868 740 aa11.76□□□□□ -0.53
RGPD5-213ENST00000495582 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
RGPD5-213ENST00000495582 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
RGPD5-213ENST00000495582 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
RGPD5-213ENST00000495582 IL21Q9HBE4 155 aa11.76□□□□□ -0.53
RGPD5-213ENST00000495582 DNAJB2P25686 324 aa11.74□□□□□ -0.53
RGPD5-213ENST00000495582 SMYD5Q6GMV2 418 aa11.74□□□□□ -0.53
RGPD5-213ENST00000495582 ADGRG1Q9Y653 693 aa11.73□□□□□ -0.53
RGPD5-213ENST00000495582 COPS2P61201 443 aa11.72□□□□□ -0.53
RGPD5-213ENST00000495582 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
RGPD5-213ENST00000495582 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
RGPD5-213ENST00000495582 TESPA1A2RU30 521 aaPredicted RBP11.71□□□□□ -0.53
RGPD5-213ENST00000495582 RCCD1A6NED2 376 aa11.7□□□□□ -0.54
RGPD5-213ENST00000495582 TMEM134Q9H6X4 195 aa11.68□□□□□ -0.54
RGPD5-213ENST00000495582 PRR14Q9BWN1 585 aa11.67□□□□□ -0.54
RGPD5-213ENST00000495582 PCDHB3Q9Y5E6 796 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms