RNA–Protein interactions for RNA: ENST00000495428.5

CMC1-211, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 608 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-211ENST00000495428 PSEN2P49810 448 aa8.46□□□□□ -1.06
CMC1-211ENST00000495428 NBR1Q14596 966 aa8.44□□□□□ -1.06
CMC1-211ENST00000495428 GRXCR2A6NFK2 248 aa8.43□□□□□ -1.06
CMC1-211ENST00000495428 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
CMC1-211ENST00000495428 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
CMC1-211ENST00000495428 TK2O00142 265 aa8.42□□□□□ -1.06
CMC1-211ENST00000495428 EN1Q05925 392 aaPredicted RBP8.41□□□□□ -1.06
CMC1-211ENST00000495428 C6orf132Q5T0Z8 1188 aa8.41□□□□□ -1.06
CMC1-211ENST00000495428 ADGRD1Q6QNK2 874 aa8.41□□□□□ -1.06
CMC1-211ENST00000495428 RBM33Q96EV2 1170 aaKnown RBP8.41□□□□□ -1.06
CMC1-211ENST00000495428 PPP1R3GB7ZBB8 358 aa8.4□□□□□ -1.06
CMC1-211ENST00000495428 SLC4A5Q9BY07 1137 aa8.4□□□□□ -1.06
CMC1-211ENST00000495428 MAP3K7O43318 606 aa8.39□□□□□ -1.07
CMC1-211ENST00000495428 OSBPP22059 807 aa8.39□□□□□ -1.07
CMC1-211ENST00000495428 HCSTQ9UBK5 93 aa8.39□□□□□ -1.07
CMC1-211ENST00000495428 MLLT3P42568 568 aaPredicted RBP8.38□□□□□ -1.07
CMC1-211ENST00000495428 ZBED2Q9BTP6 218 aa8.38□□□□□ -1.07
CMC1-211ENST00000495428 VPS9D1Q9Y2B5 631 aa8.38□□□□□ -1.07
CMC1-211ENST00000495428 SEMA3EO15041 775 aa8.37□□□□□ -1.07
CMC1-211ENST00000495428 COL9A1P20849 921 aa8.37□□□□□ -1.07
CMC1-211ENST00000495428 PRIM1P49642 420 aaKnown RBP8.37□□□□□ -1.07
CMC1-211ENST00000495428 TSR1Q2NL82 804 aaKnown RBP8.36□□□□□ -1.07
CMC1-211ENST00000495428 HRO43593 1189 aa8.35□□□□□ -1.07
CMC1-211ENST00000495428 TESPA1A2RU30 521 aaPredicted RBP8.34□□□□□ -1.07
CMC1-211ENST00000495428 CERKQ8TCT0 537 aa8.33□□□□□ -1.08
CMC1-211ENST00000495428 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
CMC1-211ENST00000495428 PROX2Q3B8N5 592 aa8.32□□□□□ -1.08
CMC1-211ENST00000495428 STAC3Q96MF2 364 aa8.32□□□□□ -1.08
CMC1-211ENST00000495428 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
CMC1-211ENST00000495428 BHMG1C9JSJ3 638 aaPredicted RBP8.3□□□□□ -1.08
CMC1-211ENST00000495428 NBPF3Q9H094 633 aa8.3□□□□□ -1.08
CMC1-211ENST00000495428 CDHR5Q9HBB8 845 aa8.3□□□□□ -1.08
CMC1-211ENST00000495428 RABGEF1Q9UJ41 708 aa8.3□□□□□ -1.08
CMC1-211ENST00000495428 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
CMC1-211ENST00000495428 PRSS12P56730 875 aa8.28□□□□□ -1.08
CMC1-211ENST00000495428 KIAA1468Q9P260 1216 aa8.28□□□□□ -1.08
CMC1-211ENST00000495428 MRPL50Q8N5N7 158 aaKnown RBP8.27□□□□□ -1.09
CMC1-211ENST00000495428 CDCA7LQ96GN5 454 aa8.27□□□□□ -1.09
CMC1-211ENST00000495428 NPDC1Q9NQX5 325 aaPredicted RBP8.27□□□□□ -1.09
CMC1-211ENST00000495428 RBM27Q9P2N5 1060 aaKnown RBP8.27□□□□□ -1.09
CMC1-211ENST00000495428 NUTM2FA1L443 756 aa8.26□□□□□ -1.09
CMC1-211ENST00000495428 PACS2Q86VP3 889 aa8.26□□□□□ -1.09
CMC1-211ENST00000495428 SLC24A1O60721 1099 aa8.25□□□□□ -1.09
CMC1-211ENST00000495428 TSKSQ9UJT2 592 aa8.25□□□□□ -1.09
CMC1-211ENST00000495428 PTGDRQ13258 359 aa8.24□□□□□ -1.09
CMC1-211ENST00000495428 RBM26Q5T8P6 1007 aaKnown RBP8.24□□□□□ -1.09
CMC1-211ENST00000495428 LAPTM4BQ86VI4 370 aa8.24□□□□□ -1.09
CMC1-211ENST00000495428 GOLGA8CPA6NN73 597 aa8.23□□□□□ -1.09
CMC1-211ENST00000495428 TULP1O00294 542 aaPredicted RBP8.23□□□□□ -1.09
CMC1-211ENST00000495428 TTC13Q8NBP0 860 aa8.23□□□□□ -1.09
CMC1-211ENST00000495428 FCHSD2O94868 740 aa8.22□□□□□ -1.09
CMC1-211ENST00000495428 FAM198AQ9UFP1 575 aa8.22□□□□□ -1.09
CMC1-211ENST00000495428 RGS20O76081 388 aa8.21□□□□□ -1.1
CMC1-211ENST00000495428 PADI6Q6TGC4 694 aa8.21□□□□□ -1.1
CMC1-211ENST00000495428 KCTD12Q96CX2 325 aaKnown RBP8.21□□□□□ -1.1
CMC1-211ENST00000495428 SEPT9Q9UHD8 586 aaPredicted RBP8.21□□□□□ -1.1
CMC1-211ENST00000495428 NBPF26B4DH59 902 aa8.2□□□□□ -1.1
CMC1-211ENST00000495428 FAM98CQ17RN3 349 aaKnown RBP8.2□□□□□ -1.1
CMC1-211ENST00000495428 WNT2BQ93097 391 aa8.2□□□□□ -1.1
CMC1-211ENST00000495428 TATDN2Q93075 761 aa8.19□□□□□ -1.1
CMC1-211ENST00000495428 ANKK1Q8NFD2 765 aa8.18□□□□□ -1.1
CMC1-211ENST00000495428 ZFRQ96KR1 1074 aaKnown RBP8.18□□□□□ -1.1
CMC1-211ENST00000495428 PNMA3Q9UL41 463 aa8.18□□□□□ -1.1
CMC1-211ENST00000495428 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
CMC1-211ENST00000495428 SMAPO00193 183 aa8.17□□□□□ -1.1
CMC1-211ENST00000495428 HIC1Q14526 733 aa8.17□□□□□ -1.1
CMC1-211ENST00000495428 THSD4Q6ZMP0 1018 aa8.17□□□□□ -1.1
CMC1-211ENST00000495428 NUDT18Q6ZVK8 323 aa8.17□□□□□ -1.1
CMC1-211ENST00000495428 GPIHBP1Q8IV16 184 aa8.17□□□□□ -1.1
CMC1-211ENST00000495428 GPR37O15354 613 aa8.16□□□□□ -1.1
CMC1-211ENST00000495428 GNPATO15228 680 aa8.14□□□□□ -1.11
CMC1-211ENST00000495428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.14□□□□□ -1.11
CMC1-211ENST00000495428 IRX2Q9BZI1 471 aaPredicted RBP8.14□□□□□ -1.11
CMC1-211ENST00000495428 SOWAHBA6NEL2 793 aa8.13□□□□□ -1.11
CMC1-211ENST00000495428 IFFO2Q5TF58 517 aa8.13□□□□□ -1.11
CMC1-211ENST00000495428 EYA1Q99502 592 aa8.13□□□□□ -1.11
CMC1-211ENST00000495428 ADGRG1Q9Y653 693 aa8.13□□□□□ -1.11
CMC1-211ENST00000495428 BCAMP50895 628 aa8.12□□□□□ -1.11
CMC1-211ENST00000495428 PTPN5P54829 565 aa8.12□□□□□ -1.11
CMC1-211ENST00000495428 RBM46Q8TBY0 533 aaKnown RBP8.12□□□□□ -1.11
CMC1-211ENST00000495428 LRCH3Q96II8 777 aa8.12□□□□□ -1.11
CMC1-211ENST00000495428 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.12□□□□□ -1.11
CMC1-211ENST00000495428 LMOD2Q6P5Q4 547 aa8.1□□□□□ -1.11
CMC1-211ENST00000495428 SAMD7Q7Z3H4 446 aa8.1□□□□□ -1.11
CMC1-211ENST00000495428 OATP04181 439 aa8.09□□□□□ -1.11
CMC1-211ENST00000495428 FECHP22830 423 aa8.09□□□□□ -1.11
CMC1-211ENST00000495428 HDGFP51858 240 aaKnown RBP8.09□□□□□ -1.11
CMC1-211ENST00000495428 DNAJB2P25686 324 aa8.08□□□□□ -1.12
CMC1-211ENST00000495428 FAM161AQ3B820 660 aa8.08□□□□□ -1.12
CMC1-211ENST00000495428 TSR3Q9UJK0 312 aaKnown RBP8.08□□□□□ -1.12
CMC1-211ENST00000495428 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
CMC1-211ENST00000495428 NYAP1Q6ZVC0 841 aa8.07□□□□□ -1.12
CMC1-211ENST00000495428 RCCD1A6NED2 376 aa8.06□□□□□ -1.12
CMC1-211ENST00000495428 SWT1Q5T5J6 900 aaKnown RBP8.06□□□□□ -1.12
CMC1-211ENST00000495428 PXYLP1Q8TE99 480 aa8.06□□□□□ -1.12
CMC1-211ENST00000495428 WBP1LQ9NX94 342 aa8.06□□□□□ -1.12
CMC1-211ENST00000495428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.05□□□□□ -1.12
CMC1-211ENST00000495428 A0A0G2JS52 829 aa8.05□□□□□ -1.12
CMC1-211ENST00000495428 SLC4A3P48751 1232 aa8.05□□□□□ -1.12
CMC1-211ENST00000495428 PPP4CP60510 307 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms