RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 KRI1Q8N9T8 703 aaKnown RBP12.84□□□□□ -0.35
VPS8-226ENST00000495190 AK7Q96M32 723 aa12.83□□□□□ -0.36
VPS8-226ENST00000495190 ST18O60284 1047 aa12.81□□□□□ -0.36
VPS8-226ENST00000495190 MAP2K5Q13163 448 aa12.81□□□□□ -0.36
VPS8-226ENST00000495190 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
VPS8-226ENST00000495190 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
VPS8-226ENST00000495190 BRPF1P55201 1214 aaPredicted RBP12.8□□□□□ -0.36
VPS8-226ENST00000495190 IRF6O14896 467 aa12.79□□□□□ -0.36
VPS8-226ENST00000495190 PPP4R3BQ5MIZ7 849 aa12.79□□□□□ -0.36
VPS8-226ENST00000495190 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
VPS8-226ENST00000495190 TRIM66O15016 1216 aa12.77□□□□□ -0.37
VPS8-226ENST00000495190 CCDC102AQ96A19 550 aa12.76□□□□□ -0.37
VPS8-226ENST00000495190 COL9A1P20849 921 aa12.74□□□□□ -0.37
VPS8-226ENST00000495190 CERKQ8TCT0 537 aa12.74□□□□□ -0.37
VPS8-226ENST00000495190 TTC13Q8NBP0 860 aa12.73□□□□□ -0.37
VPS8-226ENST00000495190 LCE2DQ5TA82 110 aaPredicted RBP12.72□□□□□ -0.37
VPS8-226ENST00000495190 MARVELD3Q96A59 401 aa12.71□□□□□ -0.37
VPS8-226ENST00000495190 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
VPS8-226ENST00000495190 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
VPS8-226ENST00000495190 PTPREP23469 700 aa12.69□□□□□ -0.38
VPS8-226ENST00000495190 PDE4DQ08499 809 aa12.69□□□□□ -0.38
VPS8-226ENST00000495190 POTEEQ6S8J3 1075 aa12.69□□□□□ -0.38
VPS8-226ENST00000495190 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
VPS8-226ENST00000495190 RBM27Q9P2N5 1060 aaKnown RBP12.69□□□□□ -0.38
VPS8-226ENST00000495190 ERBB3P21860 1342 aa12.68□□□□□ -0.38
VPS8-226ENST00000495190 PRSS12P56730 875 aa12.68□□□□□ -0.38
VPS8-226ENST00000495190 VARS2Q5ST30 1063 aaKnown RBP12.68□□□□□ -0.38
VPS8-226ENST00000495190 CDCA7LQ96GN5 454 aa12.68□□□□□ -0.38
VPS8-226ENST00000495190 FAM198AQ9UFP1 575 aa12.68□□□□□ -0.38
VPS8-226ENST00000495190 PPP1R3GB7ZBB8 358 aa12.67□□□□□ -0.38
VPS8-226ENST00000495190 AMHR2Q16671 573 aa12.67□□□□□ -0.38
VPS8-226ENST00000495190 EMP3P54852 163 aa12.66□□□□□ -0.38
VPS8-226ENST00000495190 FAM161AQ3B820 660 aa12.66□□□□□ -0.38
VPS8-226ENST00000495190 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
VPS8-226ENST00000495190 GPBP1L1Q9HC44 474 aaPredicted RBP12.66□□□□□ -0.38
VPS8-226ENST00000495190 POTEB3A0JP26 581 aa12.65□□□□□ -0.38
VPS8-226ENST00000495190 POTEBQ6S5H4 581 aa12.65□□□□□ -0.38
VPS8-226ENST00000495190 TSKSQ9UJT2 592 aa12.64□□□□□ -0.39
VPS8-226ENST00000495190 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
VPS8-226ENST00000495190 KCNK17Q96T54 332 aa12.63□□□□□ -0.39
VPS8-226ENST00000495190 FAM205CA6NFA0 338 aa12.62□□□□□ -0.39
VPS8-226ENST00000495190 PSEN2P49810 448 aa12.62□□□□□ -0.39
VPS8-226ENST00000495190 C3orf80F5H4A9 247 aa12.61□□□□□ -0.39
VPS8-226ENST00000495190 KDM4CQ9H3R0 1056 aa12.61□□□□□ -0.39
VPS8-226ENST00000495190 METTL3Q86U44 580 aaKnown RBP12.6□□□□□ -0.39
VPS8-226ENST00000495190 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
VPS8-226ENST00000495190 PXYLP1Q8TE99 480 aa12.6□□□□□ -0.39
VPS8-226ENST00000495190 REPIN1Q9BWE0 567 aaKnown RBP12.6□□□□□ -0.39
VPS8-226ENST00000495190 ZNF687Q8N1G0 1237 aa12.59□□□□□ -0.39
VPS8-226ENST00000495190 TMUB1Q9BVT8 246 aa12.59□□□□□ -0.39
VPS8-226ENST00000495190 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
VPS8-226ENST00000495190 ARHGAP33O14559 1287 aa12.58□□□□□ -0.4
VPS8-226ENST00000495190 OATP04181 439 aa12.58□□□□□ -0.4
VPS8-226ENST00000495190 PROX2Q3B8N5 592 aa12.58□□□□□ -0.4
VPS8-226ENST00000495190 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
VPS8-226ENST00000495190 ZBED2Q9BTP6 218 aa12.58□□□□□ -0.4
VPS8-226ENST00000495190 AXIN2Q9Y2T1 843 aa12.58□□□□□ -0.4
VPS8-226ENST00000495190 TMEM132AQ24JP5 1023 aa12.57□□□□□ -0.4
VPS8-226ENST00000495190 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
VPS8-226ENST00000495190 EYA1Q99502 592 aa12.56□□□□□ -0.4
VPS8-226ENST00000495190 ONECUT3O60422 494 aaPredicted RBP12.55□□□□□ -0.4
VPS8-226ENST00000495190 PBX2P40425 430 aa12.53□□□□□ -0.4
VPS8-226ENST00000495190 NLRP7Q8WX94 980 aa12.53□□□□□ -0.4
VPS8-226ENST00000495190 SLC4A5Q9BY07 1137 aa12.53□□□□□ -0.4
VPS8-226ENST00000495190 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
VPS8-226ENST00000495190 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
VPS8-226ENST00000495190 GIGYF2Q6Y7W6 1299 aaKnown RBP12.51□□□□□ -0.41
VPS8-226ENST00000495190 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
VPS8-226ENST00000495190 RBM46Q8TBY0 533 aaKnown RBP12.51□□□□□ -0.41
VPS8-226ENST00000495190 TATDN2Q93075 761 aa12.51□□□□□ -0.41
VPS8-226ENST00000495190 KCNH8Q96L42 1107 aa12.51□□□□□ -0.41
VPS8-226ENST00000495190 PACS2Q86VP3 889 aa12.5□□□□□ -0.41
VPS8-226ENST00000495190 FAM117AQ9C073 453 aa12.5□□□□□ -0.41
VPS8-226ENST00000495190 CLCN1P35523 988 aa12.49□□□□□ -0.41
VPS8-226ENST00000495190 GPCPD1Q9NPB8 672 aa12.49□□□□□ -0.41
VPS8-226ENST00000495190 KIAA1468Q9P260 1216 aa12.49□□□□□ -0.41
VPS8-226ENST00000495190 PNMA3Q9UL41 463 aa12.49□□□□□ -0.41
VPS8-226ENST00000495190 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
VPS8-226ENST00000495190 MS4A1P11836 297 aa12.48□□□□□ -0.41
VPS8-226ENST00000495190 RCCD1A6NED2 376 aa12.47□□□□□ -0.41
VPS8-226ENST00000495190 SMAPO00193 183 aa12.47□□□□□ -0.41
VPS8-226ENST00000495190 IL27Q8NEV9 243 aa12.47□□□□□ -0.41
VPS8-226ENST00000495190 RABGEF1Q9UJ41 708 aa12.47□□□□□ -0.41
VPS8-226ENST00000495190 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
VPS8-226ENST00000495190 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.41
VPS8-226ENST00000495190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
VPS8-226ENST00000495190 FAM217BQ9NTX9 383 aaPredicted RBP12.44□□□□□ -0.42
VPS8-226ENST00000495190 SSTR3P32745 418 aaPredicted RBP12.43□□□□□ -0.42
VPS8-226ENST00000495190 BHMG1C9JSJ3 638 aaPredicted RBP12.41□□□□□ -0.42
VPS8-226ENST00000495190 TK2O00142 265 aa12.41□□□□□ -0.42
VPS8-226ENST00000495190 DNAJB2P25686 324 aa12.41□□□□□ -0.42
VPS8-226ENST00000495190 TMEM134Q9H6X4 195 aa12.41□□□□□ -0.42
VPS8-226ENST00000495190 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
VPS8-226ENST00000495190 LSM11P83369 360 aaKnown RBP eCLIP12.4□□□□□ -0.42
VPS8-226ENST00000495190 DDRGK1Q96HY6 314 aa12.39□□□□□ -0.43
VPS8-226ENST00000495190 SEPT9Q9UHD8 586 aaPredicted RBP12.39□□□□□ -0.43
VPS8-226ENST00000495190 ADGRD1Q6QNK2 874 aa12.36□□□□□ -0.43
VPS8-226ENST00000495190 HRO43593 1189 aa12.35□□□□□ -0.43
VPS8-226ENST00000495190 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
VPS8-226ENST00000495190 BEGAINQ9BUH8 593 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms