RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 FAM135AQ9P2D6 1515 aa18.47■□□□□ 0.55
VTI1A-208ENST00000494728 MIA2Q96PC5 1412 aa18.47■□□□□ 0.55
VTI1A-208ENST00000494728 CEP152O94986 1710 aa18.46■□□□□ 0.55
VTI1A-208ENST00000494728 PTPRTO14522 1441 aa18.46■□□□□ 0.55
VTI1A-208ENST00000494728 DNMT1P26358 1616 aaKnown RBP18.45■□□□□ 0.54
VTI1A-208ENST00000494728 LTBP4Q8N2S1 1624 aa18.45■□□□□ 0.54
VTI1A-208ENST00000494728 ZC3H13Q5T200 1668 aaKnown RBP18.44■□□□□ 0.54
VTI1A-208ENST00000494728 KIF3BO15066 747 aa18.44■□□□□ 0.54
VTI1A-208ENST00000494728 CERKQ8TCT0 537 aa18.44■□□□□ 0.54
VTI1A-208ENST00000494728 PZPP20742 1482 aa18.44■□□□□ 0.54
VTI1A-208ENST00000494728 POLR1AO95602 1720 aaPredicted RBP18.43■□□□□ 0.54
VTI1A-208ENST00000494728 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
VTI1A-208ENST00000494728 RSPH4AQ5TD94 716 aa18.42■□□□□ 0.54
VTI1A-208ENST00000494728 ABCC3O15438 1527 aa18.42■□□□□ 0.54
VTI1A-208ENST00000494728 PLA2R1Q13018 1463 aa18.41■□□□□ 0.54
VTI1A-208ENST00000494728 A2ML1A8K2U0 1454 aa18.4■□□□□ 0.54
VTI1A-208ENST00000494728 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
VTI1A-208ENST00000494728 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.54
VTI1A-208ENST00000494728 NEURL4Q96JN8 1562 aa18.39■□□□□ 0.53
VTI1A-208ENST00000494728 FBXO31Q5XUX0 539 aaPredicted RBP18.39■□□□□ 0.53
VTI1A-208ENST00000494728 ABCC5O15440 1437 aa18.39■□□□□ 0.53
VTI1A-208ENST00000494728 FGD6Q6ZV73 1430 aa18.39■□□□□ 0.53
VTI1A-208ENST00000494728 CFAP65Q6ZU64 1925 aaKnown RBP18.39■□□□□ 0.53
VTI1A-208ENST00000494728 TSPY4P0CV99 314 aa18.38■□□□□ 0.53
VTI1A-208ENST00000494728 TSPY10P0CW01 314 aa18.38■□□□□ 0.53
VTI1A-208ENST00000494728 DMRT2Q9Y5R5 561 aa18.38■□□□□ 0.53
VTI1A-208ENST00000494728 DUOX2Q9NRD8 1548 aa18.38■□□□□ 0.53
VTI1A-208ENST00000494728 NCKAP5LQ9HCH0 1330 aa18.37■□□□□ 0.53
VTI1A-208ENST00000494728 PRDM15P57071 1507 aaPredicted RBP18.37■□□□□ 0.53
VTI1A-208ENST00000494728 DEPDC5O75140 1603 aa18.37■□□□□ 0.53
VTI1A-208ENST00000494728 TNRQ92752 1358 aa18.36■□□□□ 0.53
VTI1A-208ENST00000494728 SPATA31D1Q6ZQQ2 1576 aa18.35■□□□□ 0.53
VTI1A-208ENST00000494728 DAPK1P53355 1430 aa18.35■□□□□ 0.53
VTI1A-208ENST00000494728 WASHC2CQ9Y4E1 1318 aa18.34■□□□□ 0.53
VTI1A-208ENST00000494728 KIF15Q9NS87 1388 aa18.32■□□□□ 0.52
VTI1A-208ENST00000494728 ERVK-7P63135 1459 aa18.32■□□□□ 0.52
VTI1A-208ENST00000494728 ERBINQ96RT1 1412 aa18.3■□□□□ 0.52
VTI1A-208ENST00000494728 UGGT1Q9NYU2 1555 aa18.3■□□□□ 0.52
VTI1A-208ENST00000494728 UBR1Q8IWV7 1749 aa18.29■□□□□ 0.52
VTI1A-208ENST00000494728 ZNF335Q9H4Z2 1342 aaPredicted RBP18.29■□□□□ 0.52
VTI1A-208ENST00000494728 NLRP1Q9C000 1473 aa18.29■□□□□ 0.52
VTI1A-208ENST00000494728 APLP2Q06481 763 aa18.28■□□□□ 0.52
VTI1A-208ENST00000494728 IQSEC2Q5JU85 1478 aa18.26■□□□□ 0.51
VTI1A-208ENST00000494728 PKD2Q13563 968 aa18.26■□□□□ 0.51
VTI1A-208ENST00000494728 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
VTI1A-208ENST00000494728 RRP7BPQ9NSQ0 103 aa18.25■□□□□ 0.51
VTI1A-208ENST00000494728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.25■□□□□ 0.51
VTI1A-208ENST00000494728 IQGAP1P46940 1657 aa18.25■□□□□ 0.51
VTI1A-208ENST00000494728 ADGRL2O95490 1459 aa18.24■□□□□ 0.51
VTI1A-208ENST00000494728 STRCP1A6NGW2 1772 aa18.24■□□□□ 0.51
VTI1A-208ENST00000494728 PIK3C2BO00750 1634 aa18.22■□□□□ 0.51
VTI1A-208ENST00000494728 CHIC2Q9UKJ5 165 aa18.21■□□□□ 0.51
VTI1A-208ENST00000494728 ARHGAP31Q2M1Z3 1444 aa18.2■□□□□ 0.5
VTI1A-208ENST00000494728 SYNMO15061 1565 aa18.2■□□□□ 0.5
VTI1A-208ENST00000494728 MED14O60244 1454 aa18.2■□□□□ 0.5
VTI1A-208ENST00000494728 LMTK2Q8IWU2 1503 aa18.19■□□□□ 0.5
VTI1A-208ENST00000494728 EFCAB6Q5THR3 1501 aa18.18■□□□□ 0.5
VTI1A-208ENST00000494728 ANKRD30AQ9BXX3 1397 aa18.18■□□□□ 0.5
VTI1A-208ENST00000494728 NPHP4O75161 1426 aaPredicted RBP18.16■□□□□ 0.5
VTI1A-208ENST00000494728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.52e-8■■■□□ 18.7
VTI1A-208ENST00000494728 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.5
VTI1A-208ENST00000494728 UNC13BO14795 1591 aa18.14■□□□□ 0.49
VTI1A-208ENST00000494728 FAM50AQ14320 339 aaKnown RBP18.14■□□□□ 0.49
VTI1A-208ENST00000494728 MYO5BQ9ULV0 1848 aa18.14■□□□□ 0.49
VTI1A-208ENST00000494728 SLIT1O75093 1534 aa18.13■□□□□ 0.49
VTI1A-208ENST00000494728 CPS1P31327 1500 aa18.13■□□□□ 0.49
VTI1A-208ENST00000494728 ALKQ9UM73 1620 aa18.13■□□□□ 0.49
VTI1A-208ENST00000494728 KDM5AP29375 1690 aaKnown RBP18.13■□□□□ 0.49
VTI1A-208ENST00000494728 THEMISQ8N1K5 641 aaPredicted RBP18.13■□□□□ 0.49
VTI1A-208ENST00000494728 ANKLE2Q86XL3 938 aa18.12■□□□□ 0.49
VTI1A-208ENST00000494728 TET3O43151 1660 aa18.12■□□□□ 0.49
VTI1A-208ENST00000494728 GCC2Q8IWJ2 1684 aa18.12■□□□□ 0.49
VTI1A-208ENST00000494728 SCAF11Q99590 1463 aaKnown RBP18.11■□□□□ 0.49
VTI1A-208ENST00000494728 XIRP1Q702N8 1843 aaKnown RBP18.1■□□□□ 0.49
VTI1A-208ENST00000494728 ANKRD50Q9ULJ7 1429 aa18.1■□□□□ 0.49
VTI1A-208ENST00000494728 KANK1Q14678 1352 aa18.09■□□□□ 0.49
VTI1A-208ENST00000494728 ADGRB3O60242 1522 aa18.08■□□□□ 0.49
VTI1A-208ENST00000494728 NOS1P29475 1434 aa18.08■□□□□ 0.49
VTI1A-208ENST00000494728 E9PCH4 1651 aa18.08■□□□□ 0.48
VTI1A-208ENST00000494728 UBAP1LF5GYI3 381 aa18.06■□□□□ 0.48
VTI1A-208ENST00000494728 LTKP29376 864 aa18.06■□□□□ 0.48
VTI1A-208ENST00000494728 PPARGC1BQ86YN6 1023 aaKnown RBP18.06■□□□□ 0.48
VTI1A-208ENST00000494728 IQGAP3Q86VI3 1631 aa18.05■□□□□ 0.48
VTI1A-208ENST00000494728 LRRC7Q96NW7 1537 aa18.04■□□□□ 0.48
VTI1A-208ENST00000494728 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
VTI1A-208ENST00000494728 RPRD2Q5VT52 1461 aaKnown RBP18.02■□□□□ 0.48
VTI1A-208ENST00000494728 ROCK1Q13464 1354 aa18.01■□□□□ 0.47
VTI1A-208ENST00000494728 TMEM131LA2VDJ0 1609 aa18.01■□□□□ 0.47
VTI1A-208ENST00000494728 IDI1Q13907 227 aa18■□□□□ 0.47
VTI1A-208ENST00000494728 TXNDC2Q86VQ3 553 aa17.98■□□□□ 0.47
VTI1A-208ENST00000494728 DISP3Q9P2K9 1392 aa17.97■□□□□ 0.47
VTI1A-208ENST00000494728 ZFYVE9O95405 1425 aa17.95■□□□□ 0.46
VTI1A-208ENST00000494728 NWD1Q149M9 1564 aa17.95■□□□□ 0.46
VTI1A-208ENST00000494728 ITGAEP38570 1179 aa17.94■□□□□ 0.46
VTI1A-208ENST00000494728 PIP4K2BP78356 416 aa17.94■□□□□ 0.46
VTI1A-208ENST00000494728 SPHKAPQ2M3C7 1700 aa17.94■□□□□ 0.46
VTI1A-208ENST00000494728 ILDR2Q71H61 639 aa17.93■□□□□ 0.46
VTI1A-208ENST00000494728 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
VTI1A-208ENST00000494728 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
VTI1A-208ENST00000494728 HSPA1LP34931 641 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms