RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 TCOF1Q13428 1488 aaKnown RBP11.07□□□□□ -0.64
RBM39-239ENST00000494274 TNRQ92752 1358 aa11.07□□□□□ -0.64
RBM39-239ENST00000494274 PTPN23Q9H3S7 1636 aa11.07□□□□□ -0.64
RBM39-239ENST00000494274 ADGBQ8N7X0 1667 aa11.06□□□□□ -0.64
RBM39-239ENST00000494274 NCOA1Q15788 1441 aa11.05□□□□□ -0.64
RBM39-239ENST00000494274 CERKQ8TCT0 537 aa11.05□□□□□ -0.64
RBM39-239ENST00000494274 C3P01024 1663 aa11.04□□□□□ -0.64
RBM39-239ENST00000494274 DUOX2Q9NRD8 1548 aa11.04□□□□□ -0.64
RBM39-239ENST00000494274 KANK1Q14678 1352 aa11.04□□□□□ -0.64
RBM39-239ENST00000494274 MAST1Q9Y2H9 1570 aa11.04□□□□□ -0.64
RBM39-239ENST00000494274 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
RBM39-239ENST00000494274 FBXO41Q8TF61 875 aa11.04□□□□□ -0.64
RBM39-239ENST00000494274 SHANK2Q9UPX8 1470 aa11.04□□□□□ -0.64
RBM39-239ENST00000494274 PKD2Q13563 968 aa11.03□□□□□ -0.64
RBM39-239ENST00000494274 CLTCQ00610 1675 aaKnown RBP11.03□□□□□ -0.64
RBM39-239ENST00000494274 KDM5DQ9BY66 1539 aa11.03□□□□□ -0.64
RBM39-239ENST00000494274 ERBINQ96RT1 1412 aa11.02□□□□□ -0.64
RBM39-239ENST00000494274 ANKLE2Q86XL3 938 aa11.02□□□□□ -0.65
RBM39-239ENST00000494274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.02□□□□□ -0.65
RBM39-239ENST00000494274 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
RBM39-239ENST00000494274 PZPP20742 1482 aa11.01□□□□□ -0.65
RBM39-239ENST00000494274 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
RBM39-239ENST00000494274 SETD1BQ9UPS6 1966 aaKnown RBP11□□□□□ -0.65
RBM39-239ENST00000494274 PTPRTO14522 1441 aa11□□□□□ -0.65
RBM39-239ENST00000494274 ANKRD50Q9ULJ7 1429 aa11□□□□□ -0.65
RBM39-239ENST00000494274 A2ML1A8K2U0 1454 aa11□□□□□ -0.65
RBM39-239ENST00000494274 DNMT1P26358 1616 aaKnown RBP10.99□□□□□ -0.65
RBM39-239ENST00000494274 ABCC3O15438 1527 aa10.99□□□□□ -0.65
RBM39-239ENST00000494274 CAMSAP1Q5T5Y3 1602 aa10.98□□□□□ -0.65
RBM39-239ENST00000494274 MROH2AA6NES4 1674 aa10.98□□□□□ -0.65
RBM39-239ENST00000494274 IDI1Q13907 227 aa10.97□□□□□ -0.65
RBM39-239ENST00000494274 ZNF335Q9H4Z2 1342 aaPredicted RBP10.97□□□□□ -0.65
RBM39-239ENST00000494274 FAM135AQ9P2D6 1515 aa10.97□□□□□ -0.65
RBM39-239ENST00000494274 ADGRL2O95490 1459 aa10.96□□□□□ -0.65
RBM39-239ENST00000494274 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
RBM39-239ENST00000494274 ERVK-7P63135 1459 aa10.95□□□□□ -0.66
RBM39-239ENST00000494274 NLRP1Q9C000 1473 aa10.95□□□□□ -0.66
RBM39-239ENST00000494274 ROCK1Q13464 1354 aa10.95□□□□□ -0.66
RBM39-239ENST00000494274 TXNDC2Q86VQ3 553 aa10.95□□□□□ -0.66
RBM39-239ENST00000494274 PLA2R1Q13018 1463 aa10.94□□□□□ -0.66
RBM39-239ENST00000494274 ARHGAP31Q2M1Z3 1444 aa10.94□□□□□ -0.66
RBM39-239ENST00000494274 NUP155O75694 1391 aa10.94□□□□□ -0.66
RBM39-239ENST00000494274 EID1Q9Y6B2 187 aa10.94□□□□□ -0.66
RBM39-239ENST00000494274 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
RBM39-239ENST00000494274 EIF2AK4Q9P2K8 1649 aaKnown RBP10.94□□□□□ -0.66
RBM39-239ENST00000494274 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
RBM39-239ENST00000494274 LTKP29376 864 aa10.93□□□□□ -0.66
RBM39-239ENST00000494274 SLC52A1Q9NWF4 448 aa10.93□□□□□ -0.66
RBM39-239ENST00000494274 MROH1Q8NDA8 1641 aa10.93□□□□□ -0.66
RBM39-239ENST00000494274 UGGT1Q9NYU2 1555 aa10.93□□□□□ -0.66
RBM39-239ENST00000494274 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
RBM39-239ENST00000494274 MYO3AQ8NEV4 1616 aa10.92□□□□□ -0.66
RBM39-239ENST00000494274 BCANQ96GW7 911 aa10.92□□□□□ -0.66
RBM39-239ENST00000494274 SENP3Q9H4L4 574 aaPredicted RBP10.92□□□□□ -0.66
RBM39-239ENST00000494274 PRDM15P57071 1507 aaPredicted RBP10.91□□□□□ -0.66
RBM39-239ENST00000494274 TRIM52Q96A61 297 aa10.91□□□□□ -0.66
RBM39-239ENST00000494274 CROCC2H7BZ55 1655 aa10.91□□□□□ -0.66
RBM39-239ENST00000494274 RRBP1Q9P2E9 1410 aaKnown RBP10.91□□□□□ -0.66
RBM39-239ENST00000494274 NPHP4O75161 1426 aaPredicted RBP10.9□□□□□ -0.66
RBM39-239ENST00000494274 SPATA31D1Q6ZQQ2 1576 aa10.9□□□□□ -0.67
RBM39-239ENST00000494274 UBAP1LF5GYI3 381 aa10.89□□□□□ -0.67
RBM39-239ENST00000494274 LMTK2Q8IWU2 1503 aa10.88□□□□□ -0.67
RBM39-239ENST00000494274 NOS1P29475 1434 aa10.87□□□□□ -0.67
RBM39-239ENST00000494274 PPP1R15AO75807 674 aaPredicted RBP10.87□□□□□ -0.67
RBM39-239ENST00000494274 HDGFP51858 240 aaKnown RBP10.87□□□□□ -0.67
RBM39-239ENST00000494274 SLC26A8Q96RN1 970 aa10.87□□□□□ -0.67
RBM39-239ENST00000494274 ZC3H13Q5T200 1668 aaKnown RBP10.87□□□□□ -0.67
RBM39-239ENST00000494274 TMEM2Q9UHN6 1383 aa10.87□□□□□ -0.67
RBM39-239ENST00000494274 NUTM2DQ5VT03 806 aaPredicted RBP10.86□□□□□ -0.67
RBM39-239ENST00000494274 CEP152O94986 1710 aa10.86□□□□□ -0.67
RBM39-239ENST00000494274 VWDEQ8N2E2 1590 aa10.86□□□□□ -0.67
RBM39-239ENST00000494274 ZNF142P52746 1687 aaPredicted RBP10.85□□□□□ -0.67
RBM39-239ENST00000494274 SCAF1Q9H7N4 1312 aaKnown RBP10.85□□□□□ -0.67
RBM39-239ENST00000494274 LTBP4Q8N2S1 1624 aa10.85□□□□□ -0.67
RBM39-239ENST00000494274 PIP4K2BP78356 416 aa10.85□□□□□ -0.67
RBM39-239ENST00000494274 NAIPQ13075 1403 aa10.84□□□□□ -0.67
RBM39-239ENST00000494274 DEPDC5O75140 1603 aa10.84□□□□□ -0.67
RBM39-239ENST00000494274 PHF23Q9BUL5 403 aaPredicted RBP10.84□□□□□ -0.67
RBM39-239ENST00000494274 SLC4A1APQ9BWU0 796 aaKnown RBP10.84□□□□□ -0.67
RBM39-239ENST00000494274 MED14O60244 1454 aa10.84□□□□□ -0.67
RBM39-239ENST00000494274 RPRD2Q5VT52 1461 aaKnown RBP10.83□□□□□ -0.68
RBM39-239ENST00000494274 SCAF11Q99590 1463 aaKnown RBP10.83□□□□□ -0.68
RBM39-239ENST00000494274 TOM1O60784 492 aa10.83□□□□□ -0.68
RBM39-239ENST00000494274 ZNF326Q5BKZ1 582 aaKnown RBP10.83□□□□□ -0.68
RBM39-239ENST00000494274 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.83□□□□□ -0.68
RBM39-239ENST00000494274 EFCAB6Q5THR3 1501 aa10.83□□□□□ -0.68
RBM39-239ENST00000494274 NEURL4Q96JN8 1562 aa10.82□□□□□ -0.68
RBM39-239ENST00000494274 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
RBM39-239ENST00000494274 RBM33Q96EV2 1170 aaKnown RBP10.81□□□□□ -0.68
RBM39-239ENST00000494274 CFAP65Q6ZU64 1925 aaKnown RBP10.8□□□□□ -0.68
RBM39-239ENST00000494274 SLIT1O75093 1534 aa10.8□□□□□ -0.68
RBM39-239ENST00000494274 KCNA6P17658 529 aa10.8□□□□□ -0.68
RBM39-239ENST00000494274 FOXD1Q16676 465 aa10.8□□□□□ -0.68
RBM39-239ENST00000494274 PROSER2Q86WR7 435 aaPredicted RBP10.8□□□□□ -0.68
RBM39-239ENST00000494274 HFM1A2PYH4 1435 aa10.8□□□□□ -0.68
RBM39-239ENST00000494274 RIMS2Q9UQ26 1411 aa10.8□□□□□ -0.68
RBM39-239ENST00000494274 SYNMO15061 1565 aa10.79□□□□□ -0.68
RBM39-239ENST00000494274 PIK3C2BO00750 1634 aa10.78□□□□□ -0.68
RBM39-239ENST00000494274 IQSEC2Q5JU85 1478 aa10.78□□□□□ -0.68
RBM39-239ENST00000494274 UNC13BO14795 1591 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms