RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PCDHGA10Q9Y5H3 936 aa5.39□□□□□ -1.55
LMNB1-207ENST00000494185 KDM4FA0A1W2PPD8 638 aa5.38□□□□□ -1.55
LMNB1-207ENST00000494185 FCHSD2O94868 740 aa5.38□□□□□ -1.55
LMNB1-207ENST00000494185 KHSRPQ92945 711 aaKnown RBP eCLIP5.38□□□□□ -1.55
LMNB1-207ENST00000494185 NBPF3Q9H094 633 aa5.38□□□□□ -1.55
LMNB1-207ENST00000494185 RBM27Q9P2N5 1060 aaKnown RBP5.38□□□□□ -1.55
LMNB1-207ENST00000494185 TPRNQ4KMQ1 711 aa5.37□□□□□ -1.55
LMNB1-207ENST00000494185 RBM33Q96EV2 1170 aaKnown RBP5.37□□□□□ -1.55
LMNB1-207ENST00000494185 KCNK17Q96T54 332 aa5.37□□□□□ -1.55
LMNB1-207ENST00000494185 HIC1Q14526 733 aa5.36□□□□□ -1.55
LMNB1-207ENST00000494185 C6orf132Q5T0Z8 1188 aa5.36□□□□□ -1.55
LMNB1-207ENST00000494185 NECTIN2Q92692 538 aa5.36□□□□□ -1.55
LMNB1-207ENST00000494185 NBPF26B4DH59 902 aa5.35□□□□□ -1.55
LMNB1-207ENST00000494185 TK2O00142 265 aa5.35□□□□□ -1.55
LMNB1-207ENST00000494185 OSBPP22059 807 aa5.35□□□□□ -1.55
LMNB1-207ENST00000494185 HDGFP51858 240 aaKnown RBP5.35□□□□□ -1.55
LMNB1-207ENST00000494185 RBM26Q5T8P6 1007 aaKnown RBP5.35□□□□□ -1.55
LMNB1-207ENST00000494185 LCE2DQ5TA82 110 aaPredicted RBP5.35□□□□□ -1.55
LMNB1-207ENST00000494185 PACS2Q86VP3 889 aa5.35□□□□□ -1.55
LMNB1-207ENST00000494185 ONECUT3O60422 494 aaPredicted RBP5.34□□□□□ -1.55
LMNB1-207ENST00000494185 ADAM33Q9BZ11 813 aa5.34□□□□□ -1.55
LMNB1-207ENST00000494185 GOLGA8CPA6NN73 597 aa5.33□□□□□ -1.56
LMNB1-207ENST00000494185 PRKCSHP14314 528 aaPredicted RBP5.33□□□□□ -1.56
LMNB1-207ENST00000494185 CDAN1Q8IWY9 1227 aa5.33□□□□□ -1.56
LMNB1-207ENST00000494185 SLC4A5Q9BY07 1137 aa5.33□□□□□ -1.56
LMNB1-207ENST00000494185 GNPATO15228 680 aa5.32□□□□□ -1.56
LMNB1-207ENST00000494185 LSM11P83369 360 aaKnown RBP eCLIP5.32□□□□□ -1.56
LMNB1-207ENST00000494185 KRI1Q8N9T8 703 aaKnown RBP5.32□□□□□ -1.56
LMNB1-207ENST00000494185 OATP04181 439 aa5.31□□□□□ -1.56
LMNB1-207ENST00000494185 PRSS12P56730 875 aa5.31□□□□□ -1.56
LMNB1-207ENST00000494185 PTGDRQ13258 359 aa5.31□□□□□ -1.56
LMNB1-207ENST00000494185 LAPTM4BQ86VI4 370 aa5.31□□□□□ -1.56
LMNB1-207ENST00000494185 RBM46Q8TBY0 533 aaKnown RBP5.31□□□□□ -1.56
LMNB1-207ENST00000494185 ZC3H15Q8WU90 426 aaKnown RBP5.31□□□□□ -1.56
LMNB1-207ENST00000494185 RABGEF1Q9UJ41 708 aa5.31□□□□□ -1.56
LMNB1-207ENST00000494185 TRIM6-TRIM34B2RNG4 842 aa5.3□□□□□ -1.56
LMNB1-207ENST00000494185 RSPH4AQ5TD94 716 aa5.3□□□□□ -1.56
LMNB1-207ENST00000494185 ANKRD13DQ6ZTN6 518 aa5.3□□□□□ -1.56
LMNB1-207ENST00000494185 MRPL50Q8N5N7 158 aaKnown RBP5.3□□□□□ -1.56
LMNB1-207ENST00000494185 CDCA7LQ96GN5 454 aa5.3□□□□□ -1.56
LMNB1-207ENST00000494185 DAXXQ9UER7 740 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-207ENST00000494185 PRIM1P49642 420 aaKnown RBP5.29□□□□□ -1.56
LMNB1-207ENST00000494185 MAP2K5Q13163 448 aa5.29□□□□□ -1.56
LMNB1-207ENST00000494185 TSR1Q2NL82 804 aaKnown RBP5.29□□□□□ -1.56
LMNB1-207ENST00000494185 ADGRD1Q6QNK2 874 aa5.29□□□□□ -1.56
LMNB1-207ENST00000494185 MINK1Q8N4C8 1332 aaPredicted RBP5.28□□□□□ -1.56
LMNB1-207ENST00000494185 ZMYND10O75800 440 aa5.28□□□□□ -1.56
LMNB1-207ENST00000494185 ZBED2Q9BTP6 218 aa5.28□□□□□ -1.56
LMNB1-207ENST00000494185 PSEN2P49810 448 aa5.27□□□□□ -1.57
LMNB1-207ENST00000494185 ANKK1Q8NFD2 765 aa5.27□□□□□ -1.57
LMNB1-207ENST00000494185 VPS9D1Q9Y2B5 631 aa5.27□□□□□ -1.57
LMNB1-207ENST00000494185 AXIN2Q9Y2T1 843 aa5.27□□□□□ -1.57
LMNB1-207ENST00000494185 GPR37O15354 613 aa5.26□□□□□ -1.57
LMNB1-207ENST00000494185 MMRN1Q13201 1228 aa5.26□□□□□ -1.57
LMNB1-207ENST00000494185 FAM98CQ17RN3 349 aaKnown RBP5.26□□□□□ -1.57
LMNB1-207ENST00000494185 BARGINQ6ZT62 677 aa5.26□□□□□ -1.57
LMNB1-207ENST00000494185 PRR14Q9BWN1 585 aa5.26□□□□□ -1.57
LMNB1-207ENST00000494185 CDHR5Q9HBB8 845 aa5.26□□□□□ -1.57
LMNB1-207ENST00000494185 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.25□□□□□ -1.57
LMNB1-207ENST00000494185 DNAJB2P25686 324 aa5.25□□□□□ -1.57
LMNB1-207ENST00000494185 PADI6Q6TGC4 694 aa5.25□□□□□ -1.57
LMNB1-207ENST00000494185 SULF1Q8IWU6 871 aa5.25□□□□□ -1.57
LMNB1-207ENST00000494185 PNMA3Q9UL41 463 aa5.25□□□□□ -1.57
LMNB1-207ENST00000494185 COL9A1P20849 921 aa5.24□□□□□ -1.57
LMNB1-207ENST00000494185 NYAP1Q6ZVC0 841 aa5.24□□□□□ -1.57
LMNB1-207ENST00000494185 SLF2Q8IX21 1173 aa5.24□□□□□ -1.57
LMNB1-207ENST00000494185 LRCH3Q96II8 777 aa5.24□□□□□ -1.57
LMNB1-207ENST00000494185 AK7Q96M32 723 aa5.24□□□□□ -1.57
LMNB1-207ENST00000494185 KIAA1468Q9P260 1216 aa5.24□□□□□ -1.57
LMNB1-207ENST00000494185 CLCN1P35523 988 aa5.23□□□□□ -1.57
LMNB1-207ENST00000494185 PROX2Q3B8N5 592 aa5.23□□□□□ -1.57
LMNB1-207ENST00000494185 DMRTA1Q5VZB9 504 aa5.23□□□□□ -1.57
LMNB1-207ENST00000494185 TATDN2Q93075 761 aa5.23□□□□□ -1.57
LMNB1-207ENST00000494185 SLC24A3Q9HC58 644 aa5.23□□□□□ -1.57
LMNB1-207ENST00000494185 NPDC1Q9NQX5 325 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-207ENST00000494185 MYT1LQ9UL68 1186 aa5.23□□□□□ -1.57
LMNB1-207ENST00000494185 TTLL12Q14166 644 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-207ENST00000494185 NUDT18Q6ZVK8 323 aa5.22□□□□□ -1.57
LMNB1-207ENST00000494185 IRF6O14896 467 aa5.21□□□□□ -1.58
LMNB1-207ENST00000494185 RNF40O75150 1001 aa5.21□□□□□ -1.58
LMNB1-207ENST00000494185 METTL3Q86U44 580 aaKnown RBP5.21□□□□□ -1.58
LMNB1-207ENST00000494185 TTC13Q8NBP0 860 aa5.21□□□□□ -1.58
LMNB1-207ENST00000494185 WNT2BQ93097 391 aa5.21□□□□□ -1.58
LMNB1-207ENST00000494185 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.21□□□□□ -1.58
LMNB1-207ENST00000494185 TSKSQ9UJT2 592 aa5.21□□□□□ -1.58
LMNB1-207ENST00000494185 ADGRG1Q9Y653 693 aa5.21□□□□□ -1.58
LMNB1-207ENST00000494185 POTEB3A0JP26 581 aa5.2□□□□□ -1.58
LMNB1-207ENST00000494185 FECHP22830 423 aa5.2□□□□□ -1.58
LMNB1-207ENST00000494185 POTEBQ6S5H4 581 aa5.2□□□□□ -1.58
LMNB1-207ENST00000494185 SPNS2Q8IVW8 549 aa5.2□□□□□ -1.58
LMNB1-207ENST00000494185 CCDC102AQ96A19 550 aa5.2□□□□□ -1.58
LMNB1-207ENST00000494185 ZFRQ96KR1 1074 aaKnown RBP5.2□□□□□ -1.58
LMNB1-207ENST00000494185 KRTAP3-3Q9BYR6 98 aa5.2□□□□□ -1.58
LMNB1-207ENST00000494185 KRTAP3-2Q9BYR7 98 aa5.2□□□□□ -1.58
LMNB1-207ENST00000494185 HRO43593 1189 aa5.19□□□□□ -1.58
LMNB1-207ENST00000494185 DIXDC1Q155Q3 683 aa5.19□□□□□ -1.58
LMNB1-207ENST00000494185 KMT5BQ4FZB7 885 aa5.19□□□□□ -1.58
LMNB1-207ENST00000494185 PXYLP1Q8TE99 480 aa5.19□□□□□ -1.58
LMNB1-207ENST00000494185 RNF166Q96A37 237 aaPredicted RBP5.19□□□□□ -1.58
LMNB1-207ENST00000494185 GPCPD1Q9NPB8 672 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms