RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 APPP05067 770 aa9.69□□□□□ -0.86
BRCA1-221ENST00000493795 FOXD4L5Q5VV16 416 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-221ENST00000493795 FOXD4L4Q8WXT5 416 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-221ENST00000493795 ARGLU1Q9NWB6 273 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-221ENST00000493795 FRAT2O75474 233 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-221ENST00000493795 HOMER1Q86YM7 354 aa9.68□□□□□ -0.86
BRCA1-221ENST00000493795 DDX49Q9Y6V7 483 aaKnown RBP9.67□□□□□ -0.86
BRCA1-221ENST00000493795 RDXP35241 583 aaKnown RBP9.67□□□□□ -0.86
BRCA1-221ENST00000493795 SYNE3Q6ZMZ3 975 aa9.67□□□□□ -0.86
BRCA1-221ENST00000493795 ZCCHC6Q5VYS8 1495 aaKnown RBP9.67□□□□□ -0.86
BRCA1-221ENST00000493795 HOOK1Q9UJC3 728 aaKnown RBP9.67□□□□□ -0.86
BRCA1-221ENST00000493795 U2AF1L5P0DN76 240 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-221ENST00000493795 U2AF1Q01081 240 aaKnown RBP eCLIP9.66□□□□□ -0.86
BRCA1-221ENST00000493795 SMC4Q9NTJ3 1288 aa9.66□□□□□ -0.86
BRCA1-221ENST00000493795 HSP90B2PQ58FF3 399 aa9.66□□□□□ -0.86
BRCA1-221ENST00000493795 CWC15Q9P013 229 aaKnown RBP9.66□□□□□ -0.86
BRCA1-221ENST00000493795 CTDP1Q9Y5B0 961 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-221ENST00000493795 TRIM29Q14134 588 aa9.65□□□□□ -0.86
BRCA1-221ENST00000493795 DCAF11Q8TEB1 546 aa9.65□□□□□ -0.86
BRCA1-221ENST00000493795 ODF2Q5BJF6 829 aa9.65□□□□□ -0.87
BRCA1-221ENST00000493795 CT47A1Q5JQC4 288 aaPredicted RBP9.65□□□□□ -0.87
BRCA1-221ENST00000493795 H0YHG0 523 aa9.65□□□□□ -0.87
BRCA1-221ENST00000493795 PAK3O75914 559 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-221ENST00000493795 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-221ENST00000493795 AMOTL1Q8IY63 956 aa9.64□□□□□ -0.87
BRCA1-221ENST00000493795 MNS1Q8NEH6 495 aa9.64□□□□□ -0.87
BRCA1-221ENST00000493795 CPLX2Q6PUV4 134 aaKnown RBP9.64□□□□□ -0.87
BRCA1-221ENST00000493795 SLC4A10Q6U841 1118 aa9.64□□□□□ -0.87
BRCA1-221ENST00000493795 FAM13BQ9NYF5 915 aa9.64□□□□□ -0.87
BRCA1-221ENST00000493795 NAP1L1P55209 391 aaKnown RBP9.63□□□□□ -0.87
BRCA1-221ENST00000493795 MCTP1Q6DN14 999 aa9.63□□□□□ -0.87
BRCA1-221ENST00000493795 CCDC173Q0VFZ6 552 aa9.63□□□□□ -0.87
BRCA1-221ENST00000493795 TRIM34Q9BYJ4 488 aa9.63□□□□□ -0.87
BRCA1-221ENST00000493795 SAFB2Q14151 953 aaKnown RBP eCLIP9.63□□□□□ -0.871e-6■□□□□ 10.7
BRCA1-221ENST00000493795 ERCC4Q92889 916 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-221ENST00000493795 SIN3AQ96ST3 1273 aa9.63□□□□□ -0.87
BRCA1-221ENST00000493795 MYO6Q9UM54 1294 aa9.63□□□□□ -0.87
BRCA1-221ENST00000493795 GTF2E1P29083 439 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-221ENST00000493795 RALBP1Q15311 655 aa9.62□□□□□ -0.87
BRCA1-221ENST00000493795 GSE1Q14687 1217 aa9.62□□□□□ -0.87
BRCA1-221ENST00000493795 LRRFIP1Q32MZ4 808 aaKnown RBP9.62□□□□□ -0.87
BRCA1-221ENST00000493795 NOL10Q9BSC4 688 aaKnown RBP9.62□□□□□ -0.87
BRCA1-221ENST00000493795 LMOD3Q0VAK6 560 aa9.62□□□□□ -0.87
BRCA1-221ENST00000493795 ZRSR2Q15696 482 aaKnown RBP9.62□□□□□ -0.87
BRCA1-221ENST00000493795 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
BRCA1-221ENST00000493795 CCDC9Q9Y3X0 531 aaKnown RBP9.62□□□□□ -0.87
BRCA1-221ENST00000493795 CCDC43Q96MW1 224 aaKnown RBP9.61□□□□□ -0.87
BRCA1-221ENST00000493795 PLCD4Q9BRC7 762 aa9.61□□□□□ -0.87
BRCA1-221ENST00000493795 NEXNQ0ZGT2 675 aa9.6□□□□□ -0.87
BRCA1-221ENST00000493795 CENPJQ9HC77 1338 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-221ENST00000493795 RILPL2Q969X0 211 aa9.6□□□□□ -0.87
BRCA1-221ENST00000493795 CCDC66A2RUB6 948 aa9.59□□□□□ -0.87
BRCA1-221ENST00000493795 GOLGA3Q08378 1498 aa9.59□□□□□ -0.87
BRCA1-221ENST00000493795 RAD21O60216 631 aa9.59□□□□□ -0.87
BRCA1-221ENST00000493795 CAGE1Q8TC20 777 aa9.59□□□□□ -0.87
BRCA1-221ENST00000493795 FOXD4L6Q3SYB3 417 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-221ENST00000493795 FOXD4L3Q6VB84 417 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-221ENST00000493795 BICD2Q8TD16 824 aa9.59□□□□□ -0.87
BRCA1-221ENST00000493795 STK26Q9P289 416 aa9.59□□□□□ -0.87
BRCA1-221ENST00000493795 SASS6Q6UVJ0 657 aa9.58□□□□□ -0.88
BRCA1-221ENST00000493795 IFT57Q9NWB7 429 aa9.58□□□□□ -0.88
BRCA1-221ENST00000493795 MTERF4Q7Z6M4 381 aaKnown RBP9.58□□□□□ -0.88
BRCA1-221ENST00000493795 RUFY2Q8WXA3 655 aa9.58□□□□□ -0.88
BRCA1-221ENST00000493795 DIAPH3Q9NSV4 1193 aa9.58□□□□□ -0.88
BRCA1-221ENST00000493795 TIMELESSQ9UNS1 1208 aa9.58□□□□□ -0.88
BRCA1-221ENST00000493795 CPLX1O14810 134 aa9.57□□□□□ -0.88
BRCA1-221ENST00000493795 ZFYVE27Q5T4F4 411 aa9.57□□□□□ -0.88
BRCA1-221ENST00000493795 DHX16O60231 1041 aaKnown RBP9.57□□□□□ -0.88
BRCA1-221ENST00000493795 R3HCC1Q9Y3T6 440 aaKnown RBP9.57□□□□□ -0.88
BRCA1-221ENST00000493795 HSPA5P11021 654 aaKnown RBP9.57□□□□□ -0.88
BRCA1-221ENST00000493795 HSP90AB3PQ58FF7 597 aa9.57□□□□□ -0.88
BRCA1-221ENST00000493795 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
BRCA1-221ENST00000493795 TSPYL1Q9H0U9 437 aa9.57□□□□□ -0.88
BRCA1-221ENST00000493795 EIF3AQ14152 1382 aaKnown RBP9.56□□□□□ -0.88
BRCA1-221ENST00000493795 CCNB3Q8WWL7 1395 aa9.56□□□□□ -0.88
BRCA1-221ENST00000493795 ZKSCAN1P17029 563 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-221ENST00000493795 EPS15P42566 896 aa9.56□□□□□ -0.88
BRCA1-221ENST00000493795 FAM43AQ8N2R8 423 aa9.56□□□□□ -0.88
BRCA1-221ENST00000493795 CWC22Q9HCG8 908 aaKnown RBP9.56□□□□□ -0.88
BRCA1-221ENST00000493795 OFD1O75665 1012 aa9.56□□□□□ -0.88
BRCA1-221ENST00000493795 ANO2Q9NQ90 1003 aa9.56□□□□□ -0.88
BRCA1-221ENST00000493795 FAM161AQ3B820 660 aa9.55□□□□□ -0.88
BRCA1-221ENST00000493795 LEKR1Q6ZMV7 388 aa9.55□□□□□ -0.88
BRCA1-221ENST00000493795 STK11IPQ8N1F8 1099 aa9.55□□□□□ -0.88
BRCA1-221ENST00000493795 CEP162Q5TB80 1403 aa9.55□□□□□ -0.88
BRCA1-221ENST00000493795 ANKRD18AQ8IVF6 992 aa9.55□□□□□ -0.88
BRCA1-221ENST00000493795 MLECQ14165 292 aa9.55□□□□□ -0.88
BRCA1-221ENST00000493795 GOLGA6L7A0A1B0GV03 622 aa9.55□□□□□ -0.88
BRCA1-221ENST00000493795 PDE3BQ13370 1112 aa9.54□□□□□ -0.88
BRCA1-221ENST00000493795 OLFM4Q6UX06 510 aa9.54□□□□□ -0.88
BRCA1-221ENST00000493795 TSHZ2Q9NRE2 1034 aa9.54□□□□□ -0.88
BRCA1-221ENST00000493795 ERICH2A1L162 156 aa9.54□□□□□ -0.88
BRCA1-221ENST00000493795 CCDC73Q6ZRK6 1079 aa9.54□□□□□ -0.88
BRCA1-221ENST00000493795 CENPQQ7L2Z9 268 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-221ENST00000493795 NAT10Q9H0A0 1025 aaKnown RBP9.54□□□□□ -0.88
BRCA1-221ENST00000493795 REC8O95072 547 aa9.54□□□□□ -0.88
BRCA1-221ENST00000493795 TRDNQ13061 729 aa9.54□□□□□ -0.88
BRCA1-221ENST00000493795 ROCK2O75116 1388 aaKnown RBP9.53□□□□□ -0.88
BRCA1-221ENST00000493795 ANKRD45Q5TZF3 282 aa9.53□□□□□ -0.88
BRCA1-221ENST00000493795 NFXL1Q6ZNB6 911 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms