RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 ZC3H15Q8WU90 426 aaKnown RBP10.25□□□□□ -0.77
CCNB3-208ENST00000493507 FCHSD2O94868 740 aa10.24□□□□□ -0.77
CCNB3-208ENST00000493507 PTPREP23469 700 aa10.23□□□□□ -0.77
CCNB3-208ENST00000493507 CERKQ8TCT0 537 aa10.23□□□□□ -0.77
CCNB3-208ENST00000493507 KCNH8Q96L42 1107 aa10.23□□□□□ -0.77
CCNB3-208ENST00000493507 TSR1Q2NL82 804 aaKnown RBP10.22□□□□□ -0.77
CCNB3-208ENST00000493507 PTGDRQ13258 359 aa10.21□□□□□ -0.77
CCNB3-208ENST00000493507 HIC1Q14526 733 aa10.21□□□□□ -0.77
CCNB3-208ENST00000493507 HS3ST6Q96QI5 342 aa10.21□□□□□ -0.77
CCNB3-208ENST00000493507 ZNF687Q8N1G0 1237 aa10.2□□□□□ -0.78
CCNB3-208ENST00000493507 ZMYND10O75800 440 aa10.19□□□□□ -0.78
CCNB3-208ENST00000493507 PBX2P40425 430 aa10.19□□□□□ -0.78
CCNB3-208ENST00000493507 CDHR5Q9HBB8 845 aa10.19□□□□□ -0.78
CCNB3-208ENST00000493507 ARHGAP33O14559 1287 aa10.18□□□□□ -0.78
CCNB3-208ENST00000493507 GNPATO15228 680 aa10.18□□□□□ -0.78
CCNB3-208ENST00000493507 GPR37O15354 613 aa10.18□□□□□ -0.78
CCNB3-208ENST00000493507 NPDC1Q9NQX5 325 aaPredicted RBP10.18□□□□□ -0.78
CCNB3-208ENST00000493507 PPP1R3GB7ZBB8 358 aa10.17□□□□□ -0.78
CCNB3-208ENST00000493507 BARGINQ6ZT62 677 aa10.17□□□□□ -0.78
CCNB3-208ENST00000493507 KCNK17Q96T54 332 aa10.17□□□□□ -0.78
CCNB3-208ENST00000493507 PRKCSHP14314 528 aaPredicted RBP10.16□□□□□ -0.78
CCNB3-208ENST00000493507 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
CCNB3-208ENST00000493507 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
CCNB3-208ENST00000493507 KRI1Q8N9T8 703 aaKnown RBP10.14□□□□□ -0.79
CCNB3-208ENST00000493507 RBM27Q9P2N5 1060 aaKnown RBP10.14□□□□□ -0.79
CCNB3-208ENST00000493507 COL9A1P20849 921 aa10.13□□□□□ -0.79
CCNB3-208ENST00000493507 PRSS12P56730 875 aa10.13□□□□□ -0.79
CCNB3-208ENST00000493507 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
CCNB3-208ENST00000493507 MINK1Q8N4C8 1332 aaPredicted RBP10.11□□□□□ -0.79
CCNB3-208ENST00000493507 PSEN2P49810 448 aa10.11□□□□□ -0.79
CCNB3-208ENST00000493507 MAP2K5Q13163 448 aa10.11□□□□□ -0.79
CCNB3-208ENST00000493507 CDCA7LQ96GN5 454 aa10.11□□□□□ -0.79
CCNB3-208ENST00000493507 POTEEQ6S8J3 1075 aa10.1□□□□□ -0.79
CCNB3-208ENST00000493507 AXIN2Q9Y2T1 843 aa10.1□□□□□ -0.79
CCNB3-208ENST00000493507 ONECUT3O60422 494 aaPredicted RBP10.09□□□□□ -0.79
CCNB3-208ENST00000493507 TTC13Q8NBP0 860 aa10.09□□□□□ -0.79
CCNB3-208ENST00000493507 SLC4A5Q9BY07 1137 aa10.09□□□□□ -0.79
CCNB3-208ENST00000493507 FECHP22830 423 aa10.08□□□□□ -0.8
CCNB3-208ENST00000493507 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
CCNB3-208ENST00000493507 PADI6Q6TGC4 694 aa10.08□□□□□ -0.8
CCNB3-208ENST00000493507 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
CCNB3-208ENST00000493507 TRIM6-TRIM34B2RNG4 842 aa10.07□□□□□ -0.8
CCNB3-208ENST00000493507 IRF6O14896 467 aa10.07□□□□□ -0.8
CCNB3-208ENST00000493507 PACS2Q86VP3 889 aa10.07□□□□□ -0.8
CCNB3-208ENST00000493507 SLC24A3Q9HC58 644 aa10.07□□□□□ -0.8
CCNB3-208ENST00000493507 RB1CC1Q8TDY2 1594 aa10.06□□□□□ -0.8
CCNB3-208ENST00000493507 ZCCHC6Q5VYS8 1495 aaKnown RBP10.06□□□□□ -0.8
CCNB3-208ENST00000493507 POTEMA6NI47 508 aa10.06□□□□□ -0.8
CCNB3-208ENST00000493507 DMRTA1Q5VZB9 504 aa10.06□□□□□ -0.8
CCNB3-208ENST00000493507 AK7Q96M32 723 aa10.06□□□□□ -0.8
CCNB3-208ENST00000493507 TK2O00142 265 aa10.04□□□□□ -0.8
CCNB3-208ENST00000493507 OATP04181 439 aa10.04□□□□□ -0.8
CCNB3-208ENST00000493507 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCNB3-208ENST00000493507 PROX2Q3B8N5 592 aa10.04□□□□□ -0.8
CCNB3-208ENST00000493507 TSKSQ9UJT2 592 aa10.04□□□□□ -0.8
CCNB3-208ENST00000493507 NACADO15069 1562 aa10.03□□□□□ -0.8
CCNB3-208ENST00000493507 RABGEF1Q9UJ41 708 aa10.03□□□□□ -0.8
CCNB3-208ENST00000493507 VPS9D1Q9Y2B5 631 aa10.03□□□□□ -0.8
CCNB3-208ENST00000493507 ADGRG1Q9Y653 693 aa10.03□□□□□ -0.8
CCNB3-208ENST00000493507 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
CCNB3-208ENST00000493507 RBM46Q8TBY0 533 aaKnown RBP10.02□□□□□ -0.81
CCNB3-208ENST00000493507 CCDC102AQ96A19 550 aa10.02□□□□□ -0.81
CCNB3-208ENST00000493507 KIAA1468Q9P260 1216 aa10.02□□□□□ -0.81
CCNB3-208ENST00000493507 FAM198AQ9UFP1 575 aa10.01□□□□□ -0.81
CCNB3-208ENST00000493507 ANKRD13DQ6ZTN6 518 aa10□□□□□ -0.81
CCNB3-208ENST00000493507 CDAN1Q8IWY9 1227 aa10□□□□□ -0.81
CCNB3-208ENST00000493507 ADGRD1Q6QNK2 874 aa9.99□□□□□ -0.81
CCNB3-208ENST00000493507 TATDN2Q93075 761 aa9.99□□□□□ -0.81
CCNB3-208ENST00000493507 TRIM66O15016 1216 aa9.98□□□□□ -0.81
CCNB3-208ENST00000493507 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
CCNB3-208ENST00000493507 METTL3Q86U44 580 aaKnown RBP9.98□□□□□ -0.81
CCNB3-208ENST00000493507 NBPF3Q9H094 633 aa9.98□□□□□ -0.81
CCNB3-208ENST00000493507 PNMA3Q9UL41 463 aa9.98□□□□□ -0.81
CCNB3-208ENST00000493507 FAM161AQ3B820 660 aa9.97□□□□□ -0.81
CCNB3-208ENST00000493507 PXYLP1Q8TE99 480 aa9.97□□□□□ -0.81
CCNB3-208ENST00000493507 EYA1Q99502 592 aa9.97□□□□□ -0.81
CCNB3-208ENST00000493507 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
CCNB3-208ENST00000493507 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
CCNB3-208ENST00000493507 STAC3Q96MF2 364 aa9.96□□□□□ -0.82
CCNB3-208ENST00000493507 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
CCNB3-208ENST00000493507 PCDH10Q9P2E7 1040 aa9.95□□□□□ -0.82
CCNB3-208ENST00000493507 MYO15BQ96JP2 1530 aa9.95□□□□□ -0.82
CCNB3-208ENST00000493507 BICRAQ9NZM4 1560 aa9.94□□□□□ -0.82
CCNB3-208ENST00000493507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
CCNB3-208ENST00000493507 BHMG1C9JSJ3 638 aaPredicted RBP9.94□□□□□ -0.82
CCNB3-208ENST00000493507 AMHR2Q16671 573 aa9.94□□□□□ -0.82
CCNB3-208ENST00000493507 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
CCNB3-208ENST00000493507 FAM98CQ17RN3 349 aaKnown RBP9.93□□□□□ -0.82
CCNB3-208ENST00000493507 MRPL50Q8N5N7 158 aaKnown RBP9.93□□□□□ -0.82
CCNB3-208ENST00000493507 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
CCNB3-208ENST00000493507 SMAPO00193 183 aa9.92□□□□□ -0.82
CCNB3-208ENST00000493507 HRO43593 1189 aa9.92□□□□□ -0.82
CCNB3-208ENST00000493507 DNAJB2P25686 324 aa9.92□□□□□ -0.82
CCNB3-208ENST00000493507 PDE4DQ08499 809 aa9.92□□□□□ -0.82
CCNB3-208ENST00000493507 PHOX2BQ99453 314 aa9.92□□□□□ -0.82
CCNB3-208ENST00000493507 SEPT9Q9UHD8 586 aaPredicted RBP9.92□□□□□ -0.82
CCNB3-208ENST00000493507 DCAF1Q9Y4B6 1507 aa9.92□□□□□ -0.82
CCNB3-208ENST00000493507 CLCN1P35523 988 aa9.91□□□□□ -0.82
CCNB3-208ENST00000493507 HDGFP51858 240 aaKnown RBP9.9□□□□□ -0.82
CCNB3-208ENST00000493507 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms