RNA–Protein interactions for RNA: ENST00000493045.1

SMG7-207, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-207ENST00000493045 MAP3K9P80192 1104 aa9.6□□□□□ -0.87
SMG7-207ENST00000493045 ZFRQ96KR1 1074 aaKnown RBP9.6□□□□□ -0.87
SMG7-207ENST00000493045 WBP1LQ9NX94 342 aa9.6□□□□□ -0.87
SMG7-207ENST00000493045 LCE2BO14633 110 aa9.59□□□□□ -0.87
SMG7-207ENST00000493045 CHGAP10645 457 aaKnown RBP9.59□□□□□ -0.87
SMG7-207ENST00000493045 ONECUT3O60422 494 aaPredicted RBP9.58□□□□□ -0.88
SMG7-207ENST00000493045 KIAA1468Q9P260 1216 aa9.58□□□□□ -0.88
SMG7-207ENST00000493045 TRAF7Q6Q0C0 670 aa9.57□□□□□ -0.88
SMG7-207ENST00000493045 FBXW7Q969H0 707 aa9.56□□□□□ -0.88
SMG7-207ENST00000493045 TYW1BQ6NUM6 668 aa9.55□□□□□ -0.88
SMG7-207ENST00000493045 DDX27Q96GQ7 796 aaKnown RBP9.55□□□□□ -0.88
SMG7-207ENST00000493045 GFRA3O60609 400 aa9.54□□□□□ -0.88
SMG7-207ENST00000493045 PHF14O94880 888 aa9.54□□□□□ -0.88
SMG7-207ENST00000493045 LARP6Q9BRS8 491 aaKnown RBP9.54□□□□□ -0.88
SMG7-207ENST00000493045 EMILIN3Q9NT22 766 aa9.53□□□□□ -0.88
SMG7-207ENST00000493045 MFSD10Q14728 455 aa9.52□□□□□ -0.89
SMG7-207ENST00000493045 SEPT9Q9UHD8 586 aaPredicted RBP9.52□□□□□ -0.89
SMG7-207ENST00000493045 TSR3Q9UJK0 312 aaKnown RBP9.52□□□□□ -0.89
SMG7-207ENST00000493045 FAM98CQ17RN3 349 aaKnown RBP9.49□□□□□ -0.89
SMG7-207ENST00000493045 C6orf132Q5T0Z8 1188 aa9.49□□□□□ -0.89
SMG7-207ENST00000493045 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.49□□□□□ -0.89
SMG7-207ENST00000493045 HPS5Q9UPZ3 1129 aa9.49□□□□□ -0.89
SMG7-207ENST00000493045 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
SMG7-207ENST00000493045 LRCH3Q96II8 777 aa9.47□□□□□ -0.89
SMG7-207ENST00000493045 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
SMG7-207ENST00000493045 EPAS1Q99814 870 aa9.46□□□□□ -0.9
SMG7-207ENST00000493045 PRKD2Q9BZL6 878 aa9.44□□□□□ -0.9
SMG7-207ENST00000493045 GTPBP6O43824 516 aaPredicted RBP9.42□□□□□ -0.9
SMG7-207ENST00000493045 TJAP1Q5JTD0 557 aa9.42□□□□□ -0.9
SMG7-207ENST00000493045 PPP4CP60510 307 aa9.4□□□□□ -0.9
SMG7-207ENST00000493045 V9GY48 417 aaPredicted RBP9.4□□□□□ -0.9
SMG7-207ENST00000493045 ZNF787Q6DD87 383 aa9.38□□□□□ -0.91
SMG7-207ENST00000493045 PPP1R18Q6NYC8 613 aa9.38□□□□□ -0.91
SMG7-207ENST00000493045 PACS2Q86VP3 889 aa9.37□□□□□ -0.91
SMG7-207ENST00000493045 RBM33Q96EV2 1170 aaKnown RBP9.37□□□□□ -0.91
SMG7-207ENST00000493045 TSKSQ9UJT2 592 aa9.36□□□□□ -0.91
SMG7-207ENST00000493045 IL21Q9HBE4 155 aa9.35□□□□□ -0.91
SMG7-207ENST00000493045 CAMK2BQ13554 666 aa9.34□□□□□ -0.91
SMG7-207ENST00000493045 MTRQ99707 1265 aa9.34□□□□□ -0.91
SMG7-207ENST00000493045 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.33□□□□□ -0.92
SMG7-207ENST00000493045 DPYSL4O14531 572 aa9.32□□□□□ -0.92
SMG7-207ENST00000493045 SAMD7Q7Z3H4 446 aa9.32□□□□□ -0.92
SMG7-207ENST00000493045 ZNF775Q96BV0 537 aaPredicted RBP9.32□□□□□ -0.92
SMG7-207ENST00000493045 PDZRN3Q9UPQ7 1066 aa9.32□□□□□ -0.92
SMG7-207ENST00000493045 CADPS2Q86UW7 1296 aa9.31□□□□□ -0.92
SMG7-207ENST00000493045 DDX12PQ92771 950 aa9.31□□□□□ -0.92
SMG7-207ENST00000493045 EN1Q05925 392 aaPredicted RBP9.3□□□□□ -0.92
SMG7-207ENST00000493045 TSR1Q2NL82 804 aaKnown RBP9.29□□□□□ -0.92
SMG7-207ENST00000493045 ZNF516Q92618 1163 aa9.29□□□□□ -0.92
SMG7-207ENST00000493045 SMAPO00193 183 aa9.28□□□□□ -0.92
SMG7-207ENST00000493045 CDCA7LQ96GN5 454 aa9.27□□□□□ -0.93
SMG7-207ENST00000493045 MAP3K7O43318 606 aa9.26□□□□□ -0.93
SMG7-207ENST00000493045 NBR1Q14596 966 aa9.26□□□□□ -0.93
SMG7-207ENST00000493045 FAM198AQ9UFP1 575 aa9.25□□□□□ -0.93
SMG7-207ENST00000493045 PRSS12P56730 875 aa9.24□□□□□ -0.93
SMG7-207ENST00000493045 C3orf80F5H4A9 247 aa9.23□□□□□ -0.93
SMG7-207ENST00000493045 NKX2-3Q8TAU0 364 aa9.23□□□□□ -0.93
SMG7-207ENST00000493045 TATDN2Q93075 761 aa9.23□□□□□ -0.93
SMG7-207ENST00000493045 GGCXP38435 758 aa9.22□□□□□ -0.93
SMG7-207ENST00000493045 APLP1P51693 650 aa9.22□□□□□ -0.93
SMG7-207ENST00000493045 CERKQ8TCT0 537 aa9.21□□□□□ -0.94
SMG7-207ENST00000493045 TMUB1Q9BVT8 246 aa9.21□□□□□ -0.94
SMG7-207ENST00000493045 PNMA3Q9UL41 463 aa9.21□□□□□ -0.94
SMG7-207ENST00000493045 NBPF26B4DH59 902 aa9.2□□□□□ -0.94
SMG7-207ENST00000493045 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
SMG7-207ENST00000493045 PDIA6Q15084 440 aa9.19□□□□□ -0.94
SMG7-207ENST00000493045 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
SMG7-207ENST00000493045 RNF40O75150 1001 aa9.17□□□□□ -0.94
SMG7-207ENST00000493045 NECTIN2Q92692 538 aa9.16□□□□□ -0.94
SMG7-207ENST00000493045 SPDYE16A6NNV3 312 aaPredicted RBP9.15□□□□□ -0.94
SMG7-207ENST00000493045 MYT1Q01538 1121 aa9.15□□□□□ -0.94
SMG7-207ENST00000493045 NUDT18Q6ZVK8 323 aa9.15□□□□□ -0.94
SMG7-207ENST00000493045 DGAT1O75907 488 aa9.14□□□□□ -0.95
SMG7-207ENST00000493045 PRIM1P49642 420 aaKnown RBP9.14□□□□□ -0.95
SMG7-207ENST00000493045 COPS2P61201 443 aa9.14□□□□□ -0.95
SMG7-207ENST00000493045 ZPR1O75312 459 aa9.13□□□□□ -0.95
SMG7-207ENST00000493045 PKDCCQ504Y2 493 aa9.13□□□□□ -0.95
SMG7-207ENST00000493045 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
SMG7-207ENST00000493045 POTECB2RU33 542 aa9.12□□□□□ -0.95
SMG7-207ENST00000493045 SLC19A1P41440 591 aa9.12□□□□□ -0.95
SMG7-207ENST00000493045 PRR20EP86478 221 aa9.11□□□□□ -0.95
SMG7-207ENST00000493045 PRR20CP86479 221 aa9.11□□□□□ -0.95
SMG7-207ENST00000493045 PRR20DP86480 221 aa9.11□□□□□ -0.95
SMG7-207ENST00000493045 PRR20BP86481 221 aa9.11□□□□□ -0.95
SMG7-207ENST00000493045 PRR20AP86496 221 aa9.11□□□□□ -0.95
SMG7-207ENST00000493045 SLF2Q8IX21 1173 aa9.11□□□□□ -0.95
SMG7-207ENST00000493045 EMID1Q96A84 441 aaPredicted RBP9.11□□□□□ -0.95
SMG7-207ENST00000493045 SWT1Q5T5J6 900 aaKnown RBP9.1□□□□□ -0.95
SMG7-207ENST00000493045 RNF223E7ERA6 249 aa9.09□□□□□ -0.95
SMG7-207ENST00000493045 SPRYD7Q5W111 196 aa9.09□□□□□ -0.95
SMG7-207ENST00000493045 ZNF598Q86UK7 904 aaKnown RBP9.09□□□□□ -0.95
SMG7-207ENST00000493045 LCE2AQ5TA79 106 aaPredicted RBP9.07□□□□□ -0.96
SMG7-207ENST00000493045 TREML4Q6UXN2 200 aa9.07□□□□□ -0.96
SMG7-207ENST00000493045 TTC13Q8NBP0 860 aa9.07□□□□□ -0.96
SMG7-207ENST00000493045 CDHR5Q9HBB8 845 aa9.07□□□□□ -0.96
SMG7-207ENST00000493045 GRXCR2A6NFK2 248 aa9.06□□□□□ -0.96
SMG7-207ENST00000493045 PRR14Q9BWN1 585 aa9.05□□□□□ -0.96
SMG7-207ENST00000493045 OSBPP22059 807 aa9.04□□□□□ -0.96
SMG7-207ENST00000493045 ANKLE1Q8NAG6 615 aa9.04□□□□□ -0.96
SMG7-207ENST00000493045 PCDHB3Q9Y5E6 796 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 212.1 ms