RNA–Protein interactions for RNA: ENST00000492983.1

ATP13A3-209, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-209ENST00000492983 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
ATP13A3-209ENST00000492983 ADAM33Q9BZ11 813 aa10.14□□□□□ -0.79
ATP13A3-209ENST00000492983 NBPF3Q9H094 633 aa10.12□□□□□ -0.79
ATP13A3-209ENST00000492983 GOLGA8CPA6NN73 597 aa10.11□□□□□ -0.79
ATP13A3-209ENST00000492983 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
ATP13A3-209ENST00000492983 ZDHHC16Q969W1 377 aa10.09□□□□□ -0.79
ATP13A3-209ENST00000492983 LCE2BO14633 110 aa10.08□□□□□ -0.8
ATP13A3-209ENST00000492983 P3H3Q8IVL6 736 aa10.08□□□□□ -0.8
ATP13A3-209ENST00000492983 KCNV2Q8TDN2 545 aa10.07□□□□□ -0.8
ATP13A3-209ENST00000492983 NCKAP5LQ9HCH0 1330 aa10.07□□□□□ -0.8
ATP13A3-209ENST00000492983 PPP1R3GB7ZBB8 358 aa10.06□□□□□ -0.8
ATP13A3-209ENST00000492983 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
ATP13A3-209ENST00000492983 EVI5O60447 810 aa10.05□□□□□ -0.8
ATP13A3-209ENST00000492983 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
ATP13A3-209ENST00000492983 Q6ZNB5 142 aa10.03□□□□□ -0.8
ATP13A3-209ENST00000492983 ANKK1Q8NFD2 765 aa10.03□□□□□ -0.8
ATP13A3-209ENST00000492983 PROX2Q3B8N5 592 aa10.02□□□□□ -0.81
ATP13A3-209ENST00000492983 SOWAHBA6NEL2 793 aa10.01□□□□□ -0.81
ATP13A3-209ENST00000492983 COL9A1P20849 921 aa10.01□□□□□ -0.81
ATP13A3-209ENST00000492983 PDE4AP27815 886 aa10.01□□□□□ -0.81
ATP13A3-209ENST00000492983 BCAMP50895 628 aa10.01□□□□□ -0.81
ATP13A3-209ENST00000492983 E2F4Q16254 413 aa10□□□□□ -0.81
ATP13A3-209ENST00000492983 NYAP1Q6ZVC0 841 aa10□□□□□ -0.81
ATP13A3-209ENST00000492983 LAPTM4BQ86VI4 370 aa10□□□□□ -0.81
ATP13A3-209ENST00000492983 PCDHGA10Q9Y5H3 936 aa10□□□□□ -0.81
ATP13A3-209ENST00000492983 MFSD10Q14728 455 aa9.96□□□□□ -0.82
ATP13A3-209ENST00000492983 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.82
ATP13A3-209ENST00000492983 KCNC4Q03721 635 aa9.95□□□□□ -0.82
ATP13A3-209ENST00000492983 ZFRQ96KR1 1074 aaKnown RBP9.95□□□□□ -0.82
ATP13A3-209ENST00000492983 WBP1LQ9NX94 342 aa9.95□□□□□ -0.82
ATP13A3-209ENST00000492983 EMILIN3Q9NT22 766 aa9.94□□□□□ -0.82
ATP13A3-209ENST00000492983 ONECUT3O60422 494 aaPredicted RBP9.93□□□□□ -0.82
ATP13A3-209ENST00000492983 LAPTM4AQ15012 233 aa9.93□□□□□ -0.82
ATP13A3-209ENST00000492983 ARHGEF1Q92888 912 aaKnown RBP9.93□□□□□ -0.82
ATP13A3-209ENST00000492983 FBXW7Q969H0 707 aa9.91□□□□□ -0.82
ATP13A3-209ENST00000492983 KIAA1468Q9P260 1216 aa9.91□□□□□ -0.82
ATP13A3-209ENST00000492983 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.82
ATP13A3-209ENST00000492983 PHF14O94880 888 aa9.89□□□□□ -0.83
ATP13A3-209ENST00000492983 MAP3K9P80192 1104 aa9.89□□□□□ -0.83
ATP13A3-209ENST00000492983 TRAF7Q6Q0C0 670 aa9.88□□□□□ -0.83
ATP13A3-209ENST00000492983 SEMA3EO15041 775 aa9.87□□□□□ -0.83
ATP13A3-209ENST00000492983 SEPT9Q9UHD8 586 aaPredicted RBP9.87□□□□□ -0.83
ATP13A3-209ENST00000492983 TULP1O00294 542 aaPredicted RBP9.86□□□□□ -0.83
ATP13A3-209ENST00000492983 LMOD2Q6P5Q4 547 aa9.86□□□□□ -0.83
ATP13A3-209ENST00000492983 FAM98CQ17RN3 349 aaKnown RBP9.85□□□□□ -0.83
ATP13A3-209ENST00000492983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.85□□□□□ -0.83
ATP13A3-209ENST00000492983 TRIM6-TRIM34B2RNG4 842 aa9.84□□□□□ -0.83
ATP13A3-209ENST00000492983 TSR3Q9UJK0 312 aaKnown RBP9.84□□□□□ -0.83
ATP13A3-209ENST00000492983 GFRA3O60609 400 aa9.83□□□□□ -0.84
ATP13A3-209ENST00000492983 CAMK2BQ13554 666 aa9.83□□□□□ -0.84
ATP13A3-209ENST00000492983 C6orf132Q5T0Z8 1188 aa9.83□□□□□ -0.84
ATP13A3-209ENST00000492983 HPS5Q9UPZ3 1129 aa9.82□□□□□ -0.84
ATP13A3-209ENST00000492983 TESPA1A2RU30 521 aaPredicted RBP9.81□□□□□ -0.84
ATP13A3-209ENST00000492983 NRG2O14511 850 aaPredicted RBP9.81□□□□□ -0.84
ATP13A3-209ENST00000492983 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.81□□□□□ -0.84
ATP13A3-209ENST00000492983 TJAP1Q5JTD0 557 aa9.8□□□□□ -0.84
ATP13A3-209ENST00000492983 EPAS1Q99814 870 aa9.8□□□□□ -0.84
ATP13A3-209ENST00000492983 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
ATP13A3-209ENST00000492983 DPYSL4O14531 572 aa9.78□□□□□ -0.84
ATP13A3-209ENST00000492983 ARIH1Q9Y4X5 557 aaPredicted RBP9.77□□□□□ -0.85
ATP13A3-209ENST00000492983 PRKD2Q9BZL6 878 aa9.76□□□□□ -0.85
ATP13A3-209ENST00000492983 SMYD5Q6GMV2 418 aa9.75□□□□□ -0.85
ATP13A3-209ENST00000492983 V9GY48 417 aaPredicted RBP9.75□□□□□ -0.85
ATP13A3-209ENST00000492983 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
ATP13A3-209ENST00000492983 MLLT3P42568 568 aaPredicted RBP9.73□□□□□ -0.85
ATP13A3-209ENST00000492983 ZC3H15Q8WU90 426 aaKnown RBP9.71□□□□□ -0.86
ATP13A3-209ENST00000492983 PPP1R18Q6NYC8 613 aa9.7□□□□□ -0.86
ATP13A3-209ENST00000492983 MTRQ99707 1265 aa9.69□□□□□ -0.86
ATP13A3-209ENST00000492983 IL21Q9HBE4 155 aa9.69□□□□□ -0.86
ATP13A3-209ENST00000492983 SPDYE16A6NNV3 312 aaPredicted RBP9.68□□□□□ -0.86
ATP13A3-209ENST00000492983 EN1Q05925 392 aaPredicted RBP9.68□□□□□ -0.86
ATP13A3-209ENST00000492983 RBM26Q5T8P6 1007 aaKnown RBP9.68□□□□□ -0.86
ATP13A3-209ENST00000492983 PPP4CP60510 307 aa9.67□□□□□ -0.86
ATP13A3-209ENST00000492983 PDIA6Q15084 440 aa9.67□□□□□ -0.86
ATP13A3-209ENST00000492983 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
ATP13A3-209ENST00000492983 FAM198AQ9UFP1 575 aa9.67□□□□□ -0.86
ATP13A3-209ENST00000492983 SAMD7Q7Z3H4 446 aa9.66□□□□□ -0.86
ATP13A3-209ENST00000492983 C3orf80F5H4A9 247 aa9.65□□□□□ -0.86
ATP13A3-209ENST00000492983 TSR1Q2NL82 804 aaKnown RBP9.65□□□□□ -0.86
ATP13A3-209ENST00000492983 ZNF787Q6DD87 383 aa9.65□□□□□ -0.86
ATP13A3-209ENST00000492983 PACS2Q86VP3 889 aa9.65□□□□□ -0.86
ATP13A3-209ENST00000492983 ZNF516Q92618 1163 aa9.65□□□□□ -0.86
ATP13A3-209ENST00000492983 ZNF775Q96BV0 537 aaPredicted RBP9.65□□□□□ -0.86
ATP13A3-209ENST00000492983 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
ATP13A3-209ENST00000492983 GRXCR2A6NFK2 248 aa9.64□□□□□ -0.87
ATP13A3-209ENST00000492983 DDX12PQ92771 950 aa9.64□□□□□ -0.87
ATP13A3-209ENST00000492983 GPIHBP1Q8IV16 184 aa9.62□□□□□ -0.87
ATP13A3-209ENST00000492983 SLC24A3Q9HC58 644 aa9.62□□□□□ -0.87
ATP13A3-209ENST00000492983 PDZRN3Q9UPQ7 1066 aa9.62□□□□□ -0.87
ATP13A3-209ENST00000492983 SMAPO00193 183 aa9.61□□□□□ -0.87
ATP13A3-209ENST00000492983 APLP1P51693 650 aa9.6□□□□□ -0.87
ATP13A3-209ENST00000492983 TRIM67Q6ZTA4 783 aa9.6□□□□□ -0.87
ATP13A3-209ENST00000492983 CDCA7LQ96GN5 454 aa9.6□□□□□ -0.87
ATP13A3-209ENST00000492983 ZMYND10O75800 440 aa9.59□□□□□ -0.87
ATP13A3-209ENST00000492983 PRSS12P56730 875 aa9.59□□□□□ -0.87
ATP13A3-209ENST00000492983 NKX2-3Q8TAU0 364 aa9.59□□□□□ -0.87
ATP13A3-209ENST00000492983 PRIM1P49642 420 aaKnown RBP9.58□□□□□ -0.88
ATP13A3-209ENST00000492983 MAP3K7O43318 606 aa9.57□□□□□ -0.88
ATP13A3-209ENST00000492983 KRI1Q8N9T8 703 aaKnown RBP9.56□□□□□ -0.88
ATP13A3-209ENST00000492983 TATDN2Q93075 761 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms