RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TYW1BQ6NUM6 668 aa8.33□□□□□ -1.08
HMGB1P30-201ENST00000492455 LARP6Q9BRS8 491 aaKnown RBP8.33□□□□□ -1.08
HMGB1P30-201ENST00000492455 DNAJC5Q9H3Z4 198 aa8.33□□□□□ -1.08
HMGB1P30-201ENST00000492455 ZFRQ96KR1 1074 aaKnown RBP8.32□□□□□ -1.08
HMGB1P30-201ENST00000492455 NKX1-1Q15270 411 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P30-201ENST00000492455 KIAA1468Q9P260 1216 aa8.31□□□□□ -1.08
HMGB1P30-201ENST00000492455 PCDHGA10Q9Y5H3 936 aa8.31□□□□□ -1.08
HMGB1P30-201ENST00000492455 COL9A1P20849 921 aa8.3□□□□□ -1.08
HMGB1P30-201ENST00000492455 WBP1LQ9NX94 342 aa8.3□□□□□ -1.08
HMGB1P30-201ENST00000492455 ONECUT3O60422 494 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P30-201ENST00000492455 PHF14O94880 888 aa8.29□□□□□ -1.08
HMGB1P30-201ENST00000492455 LRCH3Q96II8 777 aa8.28□□□□□ -1.08
HMGB1P30-201ENST00000492455 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P30-201ENST00000492455 SEPT9Q9UHD8 586 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P30-201ENST00000492455 TSR3Q9UJK0 312 aaKnown RBP8.27□□□□□ -1.09
HMGB1P30-201ENST00000492455 GFRA3O60609 400 aa8.26□□□□□ -1.09
HMGB1P30-201ENST00000492455 FAM98CQ17RN3 349 aaKnown RBP8.26□□□□□ -1.09
HMGB1P30-201ENST00000492455 EPAS1Q99814 870 aa8.25□□□□□ -1.09
HMGB1P30-201ENST00000492455 HPS5Q9UPZ3 1129 aa8.25□□□□□ -1.09
HMGB1P30-201ENST00000492455 MFSD10Q14728 455 aa8.24□□□□□ -1.09
HMGB1P30-201ENST00000492455 TRAF7Q6Q0C0 670 aa8.24□□□□□ -1.09
HMGB1P30-201ENST00000492455 TRIM6-TRIM34B2RNG4 842 aa8.23□□□□□ -1.09
HMGB1P30-201ENST00000492455 EMILIN3Q9NT22 766 aa8.23□□□□□ -1.09
HMGB1P30-201ENST00000492455 C6orf132Q5T0Z8 1188 aa8.22□□□□□ -1.09
HMGB1P30-201ENST00000492455 PPP4CP60510 307 aa8.21□□□□□ -1.1
HMGB1P30-201ENST00000492455 PACS2Q86VP3 889 aa8.2□□□□□ -1.1
HMGB1P30-201ENST00000492455 NRG2O14511 850 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P30-201ENST00000492455 RBM33Q96EV2 1170 aaKnown RBP8.19□□□□□ -1.1
HMGB1P30-201ENST00000492455 GTPBP6O43824 516 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P30-201ENST00000492455 PRKD2Q9BZL6 878 aa8.18□□□□□ -1.1
HMGB1P30-201ENST00000492455 V9GY48 417 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P30-201ENST00000492455 DPYSL4O14531 572 aa8.13□□□□□ -1.11
HMGB1P30-201ENST00000492455 IL21Q9HBE4 155 aa8.13□□□□□ -1.11
HMGB1P30-201ENST00000492455 MAP3K7O43318 606 aa8.12□□□□□ -1.11
HMGB1P30-201ENST00000492455 DDX12PQ92771 950 aa8.12□□□□□ -1.11
HMGB1P30-201ENST00000492455 LCE2BO14633 110 aa8.11□□□□□ -1.11
HMGB1P30-201ENST00000492455 HDGFP51858 240 aaKnown RBP8.11□□□□□ -1.11
HMGB1P30-201ENST00000492455 TJAP1Q5JTD0 557 aa8.11□□□□□ -1.11
HMGB1P30-201ENST00000492455 ZNF787Q6DD87 383 aa8.11□□□□□ -1.11
HMGB1P30-201ENST00000492455 RTN4Q9NQC3 1192 aaKnown RBP8.11□□□□□ -1.11
HMGB1P30-201ENST00000492455 GGCXP38435 758 aa8.1□□□□□ -1.11
HMGB1P30-201ENST00000492455 NBR1Q14596 966 aa8.1□□□□□ -1.11
HMGB1P30-201ENST00000492455 PPP1R18Q6NYC8 613 aa8.1□□□□□ -1.11
HMGB1P30-201ENST00000492455 MTRQ99707 1265 aa8.1□□□□□ -1.11
HMGB1P30-201ENST00000492455 RNF40O75150 1001 aa8.09□□□□□ -1.11
HMGB1P30-201ENST00000492455 DCAF8L2P0C7V8 631 aa8.09□□□□□ -1.11
HMGB1P30-201ENST00000492455 EN1Q05925 392 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P30-201ENST00000492455 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
HMGB1P30-201ENST00000492455 TSKSQ9UJT2 592 aa8.09□□□□□ -1.11
HMGB1P30-201ENST00000492455 PDZRN3Q9UPQ7 1066 aa8.09□□□□□ -1.11
HMGB1P30-201ENST00000492455 CAMK2BQ13554 666 aa8.08□□□□□ -1.12
HMGB1P30-201ENST00000492455 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.08□□□□□ -1.12
HMGB1P30-201ENST00000492455 NBPF26B4DH59 902 aa8.07□□□□□ -1.12
HMGB1P30-201ENST00000492455 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
HMGB1P30-201ENST00000492455 CERKQ8TCT0 537 aa8.06□□□□□ -1.12
HMGB1P30-201ENST00000492455 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
HMGB1P30-201ENST00000492455 SMAPO00193 183 aa8.05□□□□□ -1.12
HMGB1P30-201ENST00000492455 TSR1Q2NL82 804 aaKnown RBP8.05□□□□□ -1.12
HMGB1P30-201ENST00000492455 CADPS2Q86UW7 1296 aa8.05□□□□□ -1.12
HMGB1P30-201ENST00000492455 PRSS12P56730 875 aa8.04□□□□□ -1.12
HMGB1P30-201ENST00000492455 AMER1Q5JTC6 1135 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P30-201ENST00000492455 PNMA3Q9UL41 463 aa8.03□□□□□ -1.12
HMGB1P30-201ENST00000492455 SLC4A3P48751 1232 aa8.02□□□□□ -1.13
HMGB1P30-201ENST00000492455 TATDN2Q93075 761 aa8.02□□□□□ -1.13
HMGB1P30-201ENST00000492455 SPDYE16A6NNV3 312 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P30-201ENST00000492455 ZNF516Q92618 1163 aa8.01□□□□□ -1.13
HMGB1P30-201ENST00000492455 PDIA6Q15084 440 aa8□□□□□ -1.13
HMGB1P30-201ENST00000492455 ZNF775Q96BV0 537 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P30-201ENST00000492455 TMUB1Q9BVT8 246 aa7.99□□□□□ -1.13
HMGB1P30-201ENST00000492455 APLP1P51693 650 aa7.98□□□□□ -1.13
HMGB1P30-201ENST00000492455 PKDCCQ504Y2 493 aa7.98□□□□□ -1.13
HMGB1P30-201ENST00000492455 SLF2Q8IX21 1173 aa7.98□□□□□ -1.13
HMGB1P30-201ENST00000492455 COPS2P61201 443 aa7.97□□□□□ -1.13
HMGB1P30-201ENST00000492455 NUDT18Q6ZVK8 323 aa7.96□□□□□ -1.14
HMGB1P30-201ENST00000492455 NKX2-3Q8TAU0 364 aa7.96□□□□□ -1.14
HMGB1P30-201ENST00000492455 PRR14Q9BWN1 585 aa7.96□□□□□ -1.14
HMGB1P30-201ENST00000492455 RBM27Q9P2N5 1060 aaKnown RBP7.95□□□□□ -1.14
HMGB1P30-201ENST00000492455 FAM198AQ9UFP1 575 aa7.95□□□□□ -1.14
HMGB1P30-201ENST00000492455 GRXCR2A6NFK2 248 aa7.94□□□□□ -1.14
HMGB1P30-201ENST00000492455 ZPR1O75312 459 aa7.92□□□□□ -1.14
HMGB1P30-201ENST00000492455 DGAT1O75907 488 aa7.92□□□□□ -1.14
HMGB1P30-201ENST00000492455 SLC19A1P41440 591 aa7.92□□□□□ -1.14
HMGB1P30-201ENST00000492455 SWT1Q5T5J6 900 aaKnown RBP7.91□□□□□ -1.14
HMGB1P30-201ENST00000492455 C3orf80F5H4A9 247 aa7.9□□□□□ -1.14
HMGB1P30-201ENST00000492455 PCDHB3Q9Y5E6 796 aa7.9□□□□□ -1.14
HMGB1P30-201ENST00000492455 MYT1Q01538 1121 aa7.88□□□□□ -1.15
HMGB1P30-201ENST00000492455 FAM187AA6NFU0 413 aa7.87□□□□□ -1.15
HMGB1P30-201ENST00000492455 RNF223E7ERA6 249 aa7.87□□□□□ -1.15
HMGB1P30-201ENST00000492455 PRR20EP86478 221 aa7.87□□□□□ -1.15
HMGB1P30-201ENST00000492455 PRR20CP86479 221 aa7.87□□□□□ -1.15
HMGB1P30-201ENST00000492455 PRR20DP86480 221 aa7.87□□□□□ -1.15
HMGB1P30-201ENST00000492455 PRR20BP86481 221 aa7.87□□□□□ -1.15
HMGB1P30-201ENST00000492455 PRR20AP86496 221 aa7.87□□□□□ -1.15
HMGB1P30-201ENST00000492455 E2F4Q16254 413 aa7.87□□□□□ -1.15
HMGB1P30-201ENST00000492455 ZNF598Q86UK7 904 aaKnown RBP7.87□□□□□ -1.15
HMGB1P30-201ENST00000492455 CDHR5Q9HBB8 845 aa7.87□□□□□ -1.15
HMGB1P30-201ENST00000492455 SPRYD7Q5W111 196 aa7.86□□□□□ -1.15
HMGB1P30-201ENST00000492455 WDR70Q9NW82 654 aa7.86□□□□□ -1.15
HMGB1P30-201ENST00000492455 PRIM1P49642 420 aaKnown RBP7.85□□□□□ -1.15
HMGB1P30-201ENST00000492455 PADI6Q6TGC4 694 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms