RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 RALBP1Q15311 655 aa14.34□□□□□ -0.11
SNED1-211ENST00000491761 NUDCQ9Y266 331 aa14.34□□□□□ -0.11
SNED1-211ENST00000491761 CCDC144AA2RUR9 1427 aa14.33□□□□□ -0.11
SNED1-211ENST00000491761 SPATA31E1Q6ZUB1 1445 aa14.33□□□□□ -0.11
SNED1-211ENST00000491761 PLEKHG5O94827 1062 aa14.33□□□□□ -0.12
SNED1-211ENST00000491761 ADGBQ8N7X0 1667 aa14.31□□□□□ -0.12
SNED1-211ENST00000491761 SHANK2Q9UPX8 1470 aa14.31□□□□□ -0.12
SNED1-211ENST00000491761 CCDC141Q6ZP82 1450 aa14.29□□□□□ -0.12
SNED1-211ENST00000491761 MYBBP1AQ9BQG0 1328 aaKnown RBP14.29□□□□□ -0.12
SNED1-211ENST00000491761 EFCAB2Q5VUJ9 269 aa14.29□□□□□ -0.12
SNED1-211ENST00000491761 KTN1Q86UP2 1357 aaKnown RBP14.28□□□□□ -0.12
SNED1-211ENST00000491761 SLC24A1O60721 1099 aa14.27□□□□□ -0.13
SNED1-211ENST00000491761 RALGAPBQ86X10 1494 aa14.27□□□□□ -0.13
SNED1-211ENST00000491761 ARHGAP5Q13017 1502 aa14.26□□□□□ -0.13
SNED1-211ENST00000491761 ABCC10Q5T3U5 1492 aa14.26□□□□□ -0.13
SNED1-211ENST00000491761 TMF1P82094 1093 aa14.26□□□□□ -0.13
SNED1-211ENST00000491761 ADCY10Q96PN6 1610 aa14.26□□□□□ -0.13
SNED1-211ENST00000491761 ABCA8O94911 1581 aa14.26□□□□□ -0.13
SNED1-211ENST00000491761 NLRP13Q86W25 1043 aa14.26□□□□□ -0.13
SNED1-211ENST00000491761 PNISRQ8TF01 805 aaKnown RBP14.26□□□□□ -0.13
SNED1-211ENST00000491761 UHRF1BP1Q6BDS2 1440 aa14.25□□□□□ -0.13
SNED1-211ENST00000491761 DHX29Q7Z478 1369 aaKnown RBP14.25□□□□□ -0.13
SNED1-211ENST00000491761 SMG6Q86US8 1419 aaKnown RBP14.25□□□□□ -0.13
SNED1-211ENST00000491761 ARHGEF12Q9NZN5 1544 aa14.24□□□□□ -0.13
SNED1-211ENST00000491761 BRD4O60885 1362 aaPredicted RBP14.24□□□□□ -0.13
SNED1-211ENST00000491761 CC2D1BQ5T0F9 858 aaKnown RBP14.23□□□□□ -0.13
SNED1-211ENST00000491761 MBD5Q9P267 1494 aa14.23□□□□□ -0.13
SNED1-211ENST00000491761 FANCIQ9NVI1 1328 aa14.23□□□□□ -0.13
SNED1-211ENST00000491761 PLEKHH2Q8IVE3 1493 aa14.22□□□□□ -0.13
SNED1-211ENST00000491761 MLECQ14165 292 aa14.22□□□□□ -0.13
SNED1-211ENST00000491761 NBPF1Q3BBV0 1214 aa14.21□□□□□ -0.14
SNED1-211ENST00000491761 CYB5RLQ6IPT4 315 aa14.2□□□□□ -0.14
SNED1-211ENST00000491761 LAS1LQ9Y4W2 734 aaKnown RBP14.2□□□□□ -0.14
SNED1-211ENST00000491761 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
SNED1-211ENST00000491761 KNSTRNQ9Y448 316 aa14.19□□□□□ -0.14
SNED1-211ENST00000491761 CROCC2H7BZ55 1655 aa14.19□□□□□ -0.14
SNED1-211ENST00000491761 SPAG9O60271 1321 aaKnown RBP14.18□□□□□ -0.14
SNED1-211ENST00000491761 ARHGEF5Q12774 1597 aa14.18□□□□□ -0.14
SNED1-211ENST00000491761 FAM135AQ9P2D6 1515 aa14.18□□□□□ -0.14
SNED1-211ENST00000491761 PDE3BQ13370 1112 aa14.18□□□□□ -0.14
SNED1-211ENST00000491761 WDR43Q15061 677 aaKnown RBP eCLIP14.17□□□□□ -0.14
SNED1-211ENST00000491761 PANK3Q9H999 370 aa14.17□□□□□ -0.14
SNED1-211ENST00000491761 RCAN3Q9UKA8 241 aa14.17□□□□□ -0.14
SNED1-211ENST00000491761 CDC42BPAQ5VT25 1732 aa14.17□□□□□ -0.14
SNED1-211ENST00000491761 KDM5CP41229 1560 aa14.16□□□□□ -0.14
SNED1-211ENST00000491761 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
SNED1-211ENST00000491761 KANK1Q14678 1352 aa14.15□□□□□ -0.14
SNED1-211ENST00000491761 SYCP2Q9BX26 1530 aa14.15□□□□□ -0.14
SNED1-211ENST00000491761 NEFMP07197 916 aa14.14□□□□□ -0.15
SNED1-211ENST00000491761 WASHC2CQ9Y4E1 1318 aa14.14□□□□□ -0.15
SNED1-211ENST00000491761 HSP90AA1P07900 732 aaKnown RBP14.14□□□□□ -0.15
SNED1-211ENST00000491761 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
SNED1-211ENST00000491761 PRAG1Q86YV5 1406 aa14.14□□□□□ -0.15
SNED1-211ENST00000491761 RRP1P56182 461 aaKnown RBP14.12□□□□□ -0.15
SNED1-211ENST00000491761 A0A0G2JS52 829 aa14.11□□□□□ -0.15
SNED1-211ENST00000491761 BCORL1Q5H9F3 1711 aa14.11□□□□□ -0.15
SNED1-211ENST00000491761 SAMD9LQ8IVG5 1584 aa14.11□□□□□ -0.15
SNED1-211ENST00000491761 ERBINQ96RT1 1412 aa14.1□□□□□ -0.15
SNED1-211ENST00000491761 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
SNED1-211ENST00000491761 STAC3Q96MF2 364 aa14.09□□□□□ -0.15
SNED1-211ENST00000491761 KIF3BO15066 747 aa14.09□□□□□ -0.15
SNED1-211ENST00000491761 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
SNED1-211ENST00000491761 NOP58Q9Y2X3 529 aaKnown RBP14.08□□□□□ -0.16
SNED1-211ENST00000491761 DUOX2Q9NRD8 1548 aa14.08□□□□□ -0.16
SNED1-211ENST00000491761 MSH5O43196 834 aa14.08□□□□□ -0.16
SNED1-211ENST00000491761 PREX2Q70Z35 1606 aa14.08□□□□□ -0.16
SNED1-211ENST00000491761 DEKP35659 375 aaKnown RBP14.07□□□□□ -0.16
SNED1-211ENST00000491761 PLCH2O75038 1416 aa14.07□□□□□ -0.16
SNED1-211ENST00000491761 LRPPRCP42704 1394 aaKnown RBP14.07□□□□□ -0.16
SNED1-211ENST00000491761 EXOC6Q8TAG9 804 aa14.07□□□□□ -0.16
SNED1-211ENST00000491761 ABCC2Q92887 1545 aa14.07□□□□□ -0.16
SNED1-211ENST00000491761 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.06□□□□□ -0.16
SNED1-211ENST00000491761 EIF3AQ14152 1382 aaKnown RBP14.06□□□□□ -0.16
SNED1-211ENST00000491761 PARD3Q8TEW0 1356 aa14.06□□□□□ -0.16
SNED1-211ENST00000491761 A2MP01023 1474 aa14.05□□□□□ -0.16
SNED1-211ENST00000491761 DISP3Q9P2K9 1392 aa14.05□□□□□ -0.16
SNED1-211ENST00000491761 RNF123Q5XPI4 1314 aa14.05□□□□□ -0.16
SNED1-211ENST00000491761 GPRASP1Q5JY77 1395 aa14.05□□□□□ -0.16
SNED1-211ENST00000491761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNED1-211ENST00000491761 TESK2Q96S53 571 aa14.05□□□□□ -0.16
SNED1-211ENST00000491761 TCERG1O14776 1098 aaKnown RBP14.04□□□□□ -0.16
SNED1-211ENST00000491761 PER1O15534 1290 aaPredicted RBP14.04□□□□□ -0.16
SNED1-211ENST00000491761 UPF2Q9HAU5 1272 aaKnown RBP14.04□□□□□ -0.16
SNED1-211ENST00000491761 CDCA7LQ96GN5 454 aa14.03□□□□□ -0.16
SNED1-211ENST00000491761 TTC37Q6PGP7 1564 aa14.02□□□□□ -0.16
SNED1-211ENST00000491761 COL17A1Q9UMD9 1497 aaPredicted RBP14.01□□□□□ -0.17
SNED1-211ENST00000491761 CDC42BPBQ9Y5S2 1711 aa14.01□□□□□ -0.17
SNED1-211ENST00000491761 PLA2R1Q13018 1463 aa14.01□□□□□ -0.17
SNED1-211ENST00000491761 EIF2AK4Q9P2K8 1649 aaKnown RBP14.01□□□□□ -0.17
SNED1-211ENST00000491761 ZBTB4Q9P1Z0 1013 aaPredicted RBP14□□□□□ -0.17
SNED1-211ENST00000491761 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
SNED1-211ENST00000491761 TRAPPC8Q9Y2L5 1435 aa14□□□□□ -0.17
SNED1-211ENST00000491761 RGS3P49796 1198 aa14□□□□□ -0.17
SNED1-211ENST00000491761 OSCARQ8IYS5 282 aa14□□□□□ -0.17
SNED1-211ENST00000491761 ADAMTS8Q9UP79 889 aa14□□□□□ -0.17
SNED1-211ENST00000491761 ZBTB7CA1YPR0 619 aa13.99□□□□□ -0.17
SNED1-211ENST00000491761 PPP2R1AP30153 589 aa13.99□□□□□ -0.17
SNED1-211ENST00000491761 IPO9Q96P70 1041 aaKnown RBP13.99□□□□□ -0.17
SNED1-211ENST00000491761 PLIN1O60240 522 aa13.99□□□□□ -0.17
SNED1-211ENST00000491761 MYO5CQ9NQX4 1742 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms