RNA–Protein interactions for RNA: ENST00000491525.5

NECTIN3-210, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-210ENST00000491525 KIAA0556O60303 1618 aa12.6□□□□□ -0.39
NECTIN3-210ENST00000491525 PTPRGP23470 1445 aa12.59□□□□□ -0.39
NECTIN3-210ENST00000491525 ZNF710Q8N1W2 664 aa12.57□□□□□ -0.4
NECTIN3-210ENST00000491525 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
NECTIN3-210ENST00000491525 MAPKBP1O60336 1514 aa12.56□□□□□ -0.4
NECTIN3-210ENST00000491525 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
NECTIN3-210ENST00000491525 KIF21BO75037 1637 aa12.54□□□□□ -0.4
NECTIN3-210ENST00000491525 UHRF1BP1LA0JNW5 1464 aa12.53□□□□□ -0.4
NECTIN3-210ENST00000491525 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
NECTIN3-210ENST00000491525 TMEM92Q6UXU6 159 aa12.53□□□□□ -0.4
NECTIN3-210ENST00000491525 RYDENQ9NUL5 291 aaKnown RBP12.53□□□□□ -0.4
NECTIN3-210ENST00000491525 ABCC2Q92887 1545 aa12.52□□□□□ -0.4
NECTIN3-210ENST00000491525 UACAQ9BZF9 1416 aa12.52□□□□□ -0.41
NECTIN3-210ENST00000491525 MARVELD3Q96A59 401 aa12.51□□□□□ -0.41
NECTIN3-210ENST00000491525 HOXB3P14651 431 aaPredicted RBP12.5□□□□□ -0.41
NECTIN3-210ENST00000491525 FAM9AQ8IZU1 332 aaPredicted RBP12.5□□□□□ -0.41
NECTIN3-210ENST00000491525 ABCC10Q5T3U5 1492 aa12.5□□□□□ -0.41
NECTIN3-210ENST00000491525 SAMD9Q5K651 1589 aa12.49□□□□□ -0.41
NECTIN3-210ENST00000491525 DIP2BQ9P265 1576 aa12.49□□□□□ -0.41
NECTIN3-210ENST00000491525 TTBK1Q5TCY1 1321 aaPredicted RBP12.49□□□□□ -0.41
NECTIN3-210ENST00000491525 EMP3P54852 163 aa12.49□□□□□ -0.41
NECTIN3-210ENST00000491525 KIF13AQ9H1H9 1805 aa12.48□□□□□ -0.41
NECTIN3-210ENST00000491525 KDM5BQ9UGL1 1544 aa12.48□□□□□ -0.41
NECTIN3-210ENST00000491525 PLB1Q6P1J6 1458 aa12.47□□□□□ -0.41
NECTIN3-210ENST00000491525 PPP1R37O75864 691 aa12.47□□□□□ -0.41
NECTIN3-210ENST00000491525 CDAN1Q8IWY9 1227 aa12.47□□□□□ -0.41
NECTIN3-210ENST00000491525 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
NECTIN3-210ENST00000491525 ABCA8O94911 1581 aa12.47□□□□□ -0.41
NECTIN3-210ENST00000491525 PLSCR2Q9NRY7 297 aa12.46□□□□□ -0.41
NECTIN3-210ENST00000491525 ASXL2Q76L83 1435 aa12.44□□□□□ -0.42
NECTIN3-210ENST00000491525 C2orf72A6NCS6 295 aa12.43□□□□□ -0.42
NECTIN3-210ENST00000491525 HOXB1P14653 301 aaPredicted RBP12.43□□□□□ -0.42
NECTIN3-210ENST00000491525 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
NECTIN3-210ENST00000491525 ZSWIM6Q9HCJ5 1215 aa12.43□□□□□ -0.42
NECTIN3-210ENST00000491525 ZCCHC11Q5TAX3 1644 aaKnown RBP12.43□□□□□ -0.42
NECTIN3-210ENST00000491525 NKX1-1Q15270 411 aaPredicted RBP12.42□□□□□ -0.42
NECTIN3-210ENST00000491525 FAM69CQ0P6D2 419 aa12.41□□□□□ -0.42
NECTIN3-210ENST00000491525 EFCAB5A4FU69 1503 aa12.41□□□□□ -0.42
NECTIN3-210ENST00000491525 FAM205CA6NFA0 338 aa12.4□□□□□ -0.42
NECTIN3-210ENST00000491525 GLI2P10070 1586 aa12.39□□□□□ -0.43
NECTIN3-210ENST00000491525 KIF3CO14782 793 aa12.39□□□□□ -0.43
NECTIN3-210ENST00000491525 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
NECTIN3-210ENST00000491525 FHOD3Q2V2M9 1422 aa12.38□□□□□ -0.43
NECTIN3-210ENST00000491525 WDR7Q9Y4E6 1490 aa12.38□□□□□ -0.43
NECTIN3-210ENST00000491525 EPRSP07814 1512 aaKnown RBP12.37□□□□□ -0.43
NECTIN3-210ENST00000491525 RAPGEF6Q8TEU7 1601 aa12.36□□□□□ -0.43
NECTIN3-210ENST00000491525 ERBB3P21860 1342 aa12.36□□□□□ -0.43
NECTIN3-210ENST00000491525 HS3ST6Q96QI5 342 aa12.35□□□□□ -0.43
NECTIN3-210ENST00000491525 ATP10BO94823 1461 aa12.34□□□□□ -0.43
NECTIN3-210ENST00000491525 NUP153P49790 1475 aaKnown RBP12.34□□□□□ -0.43
NECTIN3-210ENST00000491525 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
NECTIN3-210ENST00000491525 PPRC1Q5VV67 1664 aaKnown RBP12.33□□□□□ -0.44
NECTIN3-210ENST00000491525 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
NECTIN3-210ENST00000491525 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.44
NECTIN3-210ENST00000491525 MAP3K4Q9Y6R4 1608 aa12.33□□□□□ -0.44
NECTIN3-210ENST00000491525 GPR153Q6NV75 609 aa12.32□□□□□ -0.44
NECTIN3-210ENST00000491525 ARSIQ5FYB1 569 aa12.31□□□□□ -0.44
NECTIN3-210ENST00000491525 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
NECTIN3-210ENST00000491525 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
NECTIN3-210ENST00000491525 TSPOAP1O95153 1857 aa12.29□□□□□ -0.44
NECTIN3-210ENST00000491525 ARID3CA6NKF2 412 aa12.28□□□□□ -0.44
NECTIN3-210ENST00000491525 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
NECTIN3-210ENST00000491525 KDM6BO15054 1643 aa12.28□□□□□ -0.44
NECTIN3-210ENST00000491525 SLC34A2O95436 690 aa12.27□□□□□ -0.45
NECTIN3-210ENST00000491525 FOXK1P85037 733 aa12.27□□□□□ -0.45
NECTIN3-210ENST00000491525 FMN1Q68DA7 1419 aa12.27□□□□□ -0.45
NECTIN3-210ENST00000491525 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
NECTIN3-210ENST00000491525 TEX14Q8IWB6 1497 aa12.26□□□□□ -0.45
NECTIN3-210ENST00000491525 MAGI3Q5TCQ9 1506 aa12.26□□□□□ -0.45
NECTIN3-210ENST00000491525 POTEB3A0JP26 581 aa12.25□□□□□ -0.45
NECTIN3-210ENST00000491525 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
NECTIN3-210ENST00000491525 POTEBQ6S5H4 581 aa12.25□□□□□ -0.45
NECTIN3-210ENST00000491525 PLPP6Q8IY26 295 aa12.25□□□□□ -0.45
NECTIN3-210ENST00000491525 CD109Q6YHK3 1445 aa12.24□□□□□ -0.45
NECTIN3-210ENST00000491525 ABCA9Q8IUA7 1624 aa12.24□□□□□ -0.45
NECTIN3-210ENST00000491525 HECW1Q76N89 1606 aa12.23□□□□□ -0.45
NECTIN3-210ENST00000491525 CDK13Q14004 1512 aaKnown RBP12.23□□□□□ -0.45
NECTIN3-210ENST00000491525 COL17A1Q9UMD9 1497 aaPredicted RBP12.23□□□□□ -0.45
NECTIN3-210ENST00000491525 BBXQ8WY36 941 aaPredicted RBP12.23□□□□□ -0.45
NECTIN3-210ENST00000491525 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
NECTIN3-210ENST00000491525 PCDHGA4Q9Y5G9 962 aa12.23□□□□□ -0.45
NECTIN3-210ENST00000491525 PDE4AP27815 886 aa12.22□□□□□ -0.45
NECTIN3-210ENST00000491525 DSG2Q14126 1118 aa12.21□□□□□ -0.45
NECTIN3-210ENST00000491525 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.45
NECTIN3-210ENST00000491525 CLIP1P30622 1438 aa12.2□□□□□ -0.46
NECTIN3-210ENST00000491525 PCF11O94913 1555 aaKnown RBP12.2□□□□□ -0.46
NECTIN3-210ENST00000491525 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
NECTIN3-210ENST00000491525 TBC1D12O60347 775 aa12.19□□□□□ -0.46
NECTIN3-210ENST00000491525 NUDT7P0C024 238 aa12.19□□□□□ -0.46
NECTIN3-210ENST00000491525 CRISPLD2Q9H0B8 497 aa12.18□□□□□ -0.46
NECTIN3-210ENST00000491525 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
NECTIN3-210ENST00000491525 CASKIN1Q8WXD9 1431 aa12.18□□□□□ -0.46
NECTIN3-210ENST00000491525 PTCD2Q8WV60 388 aaKnown RBP12.17□□□□□ -0.46
NECTIN3-210ENST00000491525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.16□□□□□ -0.46
NECTIN3-210ENST00000491525 PLEKHD1A6NEE1 506 aa12.16□□□□□ -0.46
NECTIN3-210ENST00000491525 ZNF687Q8N1G0 1237 aa12.16□□□□□ -0.46
NECTIN3-210ENST00000491525 TTC37Q6PGP7 1564 aa12.16□□□□□ -0.46
NECTIN3-210ENST00000491525 LRRIQ1Q96JM4 1722 aa12.16□□□□□ -0.46
NECTIN3-210ENST00000491525 FYCO1Q9BQS8 1478 aa12.15□□□□□ -0.46
NECTIN3-210ENST00000491525 KRTAP3-3Q9BYR6 98 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms