RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-212ENST00000490723 MAP3K7O43318 606 aa10.6□□□□□ -0.71
PHC3-212ENST00000490723 OSBPP22059 807 aa10.6□□□□□ -0.71
PHC3-212ENST00000490723 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
PHC3-212ENST00000490723 EN1Q05925 392 aaPredicted RBP10.59□□□□□ -0.71
PHC3-212ENST00000490723 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
PHC3-212ENST00000490723 TESPA1A2RU30 521 aaPredicted RBP10.58□□□□□ -0.72
PHC3-212ENST00000490723 LSM11P83369 360 aaKnown RBP eCLIP10.58□□□□□ -0.72
PHC3-212ENST00000490723 C6orf132Q5T0Z8 1188 aa10.58□□□□□ -0.72
PHC3-212ENST00000490723 DMRTA1Q5VZB9 504 aa10.58□□□□□ -0.72
PHC3-212ENST00000490723 TSR1Q2NL82 804 aaKnown RBP10.57□□□□□ -0.72
PHC3-212ENST00000490723 COL9A1P20849 921 aa10.54□□□□□ -0.72
PHC3-212ENST00000490723 SMYD5Q6GMV2 418 aa10.54□□□□□ -0.72
PHC3-212ENST00000490723 PPP1R3GB7ZBB8 358 aa10.52□□□□□ -0.73
PHC3-212ENST00000490723 CDHR5Q9HBB8 845 aa10.52□□□□□ -0.73
PHC3-212ENST00000490723 RBM26Q5T8P6 1007 aaKnown RBP10.5□□□□□ -0.73
PHC3-212ENST00000490723 ADGRD1Q6QNK2 874 aa10.5□□□□□ -0.73
PHC3-212ENST00000490723 NUTM2FA1L443 756 aa10.49□□□□□ -0.73
PHC3-212ENST00000490723 ZBED2Q9BTP6 218 aa10.49□□□□□ -0.73
PHC3-212ENST00000490723 PROX2Q3B8N5 592 aa10.48□□□□□ -0.73
PHC3-212ENST00000490723 VPS9D1Q9Y2B5 631 aa10.48□□□□□ -0.73
PHC3-212ENST00000490723 TK2O00142 265 aa10.47□□□□□ -0.73
PHC3-212ENST00000490723 TULP1O00294 542 aaPredicted RBP10.47□□□□□ -0.73
PHC3-212ENST00000490723 SPNS2Q8IVW8 549 aa10.47□□□□□ -0.73
PHC3-212ENST00000490723 SLC4A5Q9BY07 1137 aa10.45□□□□□ -0.74
PHC3-212ENST00000490723 CERKQ8TCT0 537 aa10.44□□□□□ -0.74
PHC3-212ENST00000490723 NPDC1Q9NQX5 325 aaPredicted RBP10.44□□□□□ -0.74
PHC3-212ENST00000490723 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
PHC3-212ENST00000490723 CDCA7LQ96GN5 454 aa10.42□□□□□ -0.74
PHC3-212ENST00000490723 PLSCR2Q9NRY7 297 aa10.42□□□□□ -0.74
PHC3-212ENST00000490723 TRIM6-TRIM34B2RNG4 842 aa10.41□□□□□ -0.74
PHC3-212ENST00000490723 HRO43593 1189 aa10.41□□□□□ -0.74
PHC3-212ENST00000490723 PRSS12P56730 875 aa10.41□□□□□ -0.74
PHC3-212ENST00000490723 PTGDRQ13258 359 aa10.41□□□□□ -0.74
PHC3-212ENST00000490723 KIAA1468Q9P260 1216 aa10.41□□□□□ -0.74
PHC3-212ENST00000490723 TSKSQ9UJT2 592 aa10.4□□□□□ -0.74
PHC3-212ENST00000490723 FCHSD2O94868 740 aa10.39□□□□□ -0.75
PHC3-212ENST00000490723 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.39□□□□□ -0.75
PHC3-212ENST00000490723 GPIHBP1Q8IV16 184 aa10.39□□□□□ -0.75
PHC3-212ENST00000490723 BCANQ96GW7 911 aa10.39□□□□□ -0.75
PHC3-212ENST00000490723 RABGEF1Q9UJ41 708 aa10.39□□□□□ -0.75
PHC3-212ENST00000490723 PADI6Q6TGC4 694 aa10.38□□□□□ -0.75
PHC3-212ENST00000490723 FAM198AQ9UFP1 575 aa10.38□□□□□ -0.75
PHC3-212ENST00000490723 MYT1LQ9UL68 1186 aa10.38□□□□□ -0.75
PHC3-212ENST00000490723 BHMG1C9JSJ3 638 aaPredicted RBP10.37□□□□□ -0.75
PHC3-212ENST00000490723 ONECUT3O60422 494 aaPredicted RBP10.37□□□□□ -0.75
PHC3-212ENST00000490723 MMRN1Q13201 1228 aa10.37□□□□□ -0.75
PHC3-212ENST00000490723 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
PHC3-212ENST00000490723 PACS2Q86VP3 889 aa10.37□□□□□ -0.75
PHC3-212ENST00000490723 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
PHC3-212ENST00000490723 MRPL50Q8N5N7 158 aaKnown RBP10.36□□□□□ -0.75
PHC3-212ENST00000490723 SEPT9Q9UHD8 586 aaPredicted RBP10.36□□□□□ -0.75
PHC3-212ENST00000490723 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
PHC3-212ENST00000490723 GOLGA8CPA6NN73 597 aa10.33□□□□□ -0.76
PHC3-212ENST00000490723 SMAPO00193 183 aa10.33□□□□□ -0.76
PHC3-212ENST00000490723 GPR37O15354 613 aa10.33□□□□□ -0.76
PHC3-212ENST00000490723 HIC1Q14526 733 aa10.33□□□□□ -0.76
PHC3-212ENST00000490723 PNMA3Q9UL41 463 aa10.33□□□□□ -0.76
PHC3-212ENST00000490723 C3orf80F5H4A9 247 aa10.32□□□□□ -0.76
PHC3-212ENST00000490723 TTC13Q8NBP0 860 aa10.32□□□□□ -0.76
PHC3-212ENST00000490723 RNF166Q96A37 237 aaPredicted RBP10.32□□□□□ -0.76
PHC3-212ENST00000490723 NBPF26B4DH59 902 aa10.31□□□□□ -0.76
PHC3-212ENST00000490723 FECHP22830 423 aa10.31□□□□□ -0.76
PHC3-212ENST00000490723 NUDT18Q6ZVK8 323 aa10.31□□□□□ -0.76
PHC3-212ENST00000490723 TATDN2Q93075 761 aa10.31□□□□□ -0.76
PHC3-212ENST00000490723 GNPATO15228 680 aa10.3□□□□□ -0.76
PHC3-212ENST00000490723 FAM161AQ3B820 660 aa10.3□□□□□ -0.76
PHC3-212ENST00000490723 KCTD12Q96CX2 325 aaKnown RBP10.3□□□□□ -0.76
PHC3-212ENST00000490723 LAPTM4BQ86VI4 370 aa10.29□□□□□ -0.76
PHC3-212ENST00000490723 FAM98CQ17RN3 349 aaKnown RBP10.28□□□□□ -0.76
PHC3-212ENST00000490723 WNT2BQ93097 391 aa10.27□□□□□ -0.77
PHC3-212ENST00000490723 ZFRQ96KR1 1074 aaKnown RBP10.27□□□□□ -0.77
PHC3-212ENST00000490723 ADGRG1Q9Y653 693 aa10.25□□□□□ -0.77
PHC3-212ENST00000490723 ANKK1Q8NFD2 765 aa10.24□□□□□ -0.77
PHC3-212ENST00000490723 ZC3H15Q8WU90 426 aaKnown RBP10.24□□□□□ -0.77
PHC3-212ENST00000490723 RBM46Q8TBY0 533 aaKnown RBP10.23□□□□□ -0.77
PHC3-212ENST00000490723 EYA1Q99502 592 aa10.23□□□□□ -0.77
PHC3-212ENST00000490723 BCAMP50895 628 aa10.21□□□□□ -0.77
PHC3-212ENST00000490723 PTPN5P54829 565 aa10.21□□□□□ -0.77
PHC3-212ENST00000490723 OATP04181 439 aa10.2□□□□□ -0.78
PHC3-212ENST00000490723 THSD4Q6ZMP0 1018 aa10.2□□□□□ -0.78
PHC3-212ENST00000490723 SAMD7Q7Z3H4 446 aa10.2□□□□□ -0.78
PHC3-212ENST00000490723 HDGFP51858 240 aaKnown RBP10.19□□□□□ -0.78
PHC3-212ENST00000490723 MAP2K5Q13163 448 aa10.19□□□□□ -0.78
PHC3-212ENST00000490723 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
PHC3-212ENST00000490723 PXYLP1Q8TE99 480 aa10.19□□□□□ -0.78
PHC3-212ENST00000490723 LRCH3Q96II8 777 aa10.19□□□□□ -0.78
PHC3-212ENST00000490723 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.19□□□□□ -0.78
PHC3-212ENST00000490723 RCCD1A6NED2 376 aa10.18□□□□□ -0.78
PHC3-212ENST00000490723 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
PHC3-212ENST00000490723 METTL3Q86U44 580 aaKnown RBP10.18□□□□□ -0.78
PHC3-212ENST00000490723 RNF40O75150 1001 aa10.17□□□□□ -0.78
PHC3-212ENST00000490723 ZMYND10O75800 440 aa10.17□□□□□ -0.78
PHC3-212ENST00000490723 DNAJB2P25686 324 aa10.17□□□□□ -0.78
PHC3-212ENST00000490723 SWT1Q5T5J6 900 aaKnown RBP10.17□□□□□ -0.78
PHC3-212ENST00000490723 MINK1Q8N4C8 1332 aaPredicted RBP10.16□□□□□ -0.78
PHC3-212ENST00000490723 IRF6O14896 467 aa10.16□□□□□ -0.78
PHC3-212ENST00000490723 BARGINQ6ZT62 677 aa10.16□□□□□ -0.78
PHC3-212ENST00000490723 HCSTQ9UBK5 93 aa10.16□□□□□ -0.78
PHC3-212ENST00000490723 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
PHC3-212ENST00000490723 HPS5Q9UPZ3 1129 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms