RNA–Protein interactions for RNA: ENST00000490647.1

LINC02049-201, Transcript of long intergenic non-protein coding RNA 2049, humanhuman

TSL 1 (best) BASIC

Gene LINC02049, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02049-201ENST00000490647 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
LINC02049-201ENST00000490647 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
LINC02049-201ENST00000490647 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
LINC02049-201ENST00000490647 KRTAP3-3Q9BYR6 98 aa11.24□□□□□ -0.61
LINC02049-201ENST00000490647 KRTAP3-2Q9BYR7 98 aa11.24□□□□□ -0.61
LINC02049-201ENST00000490647 MAP3K7O43318 606 aa11.23□□□□□ -0.61
LINC02049-201ENST00000490647 COL9A1P20849 921 aa11.23□□□□□ -0.61
LINC02049-201ENST00000490647 DMRTA1Q5VZB9 504 aa11.23□□□□□ -0.61
LINC02049-201ENST00000490647 FBXW7Q969H0 707 aa11.23□□□□□ -0.61
LINC02049-201ENST00000490647 BCANQ96GW7 911 aa11.23□□□□□ -0.61
LINC02049-201ENST00000490647 C6orf132Q5T0Z8 1188 aa11.22□□□□□ -0.61
LINC02049-201ENST00000490647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC02049-201ENST00000490647 ARHGAP33O14559 1287 aa11.18□□□□□ -0.62
LINC02049-201ENST00000490647 PTPREP23469 700 aa11.18□□□□□ -0.62
LINC02049-201ENST00000490647 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
LINC02049-201ENST00000490647 NUTM2FA1L443 756 aa11.16□□□□□ -0.62
LINC02049-201ENST00000490647 GPR37O15354 613 aa11.16□□□□□ -0.62
LINC02049-201ENST00000490647 SMYD5Q6GMV2 418 aa11.16□□□□□ -0.62
LINC02049-201ENST00000490647 LMOD2Q6P5Q4 547 aa11.16□□□□□ -0.62
LINC02049-201ENST00000490647 PBX2P40425 430 aa11.14□□□□□ -0.63
LINC02049-201ENST00000490647 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
LINC02049-201ENST00000490647 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
LINC02049-201ENST00000490647 LSM11P83369 360 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC02049-201ENST00000490647 ZBED2Q9BTP6 218 aa11.12□□□□□ -0.63
LINC02049-201ENST00000490647 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
LINC02049-201ENST00000490647 PTGDRQ13258 359 aa11.11□□□□□ -0.63
LINC02049-201ENST00000490647 ANKRD13DQ6ZTN6 518 aa11.11□□□□□ -0.63
LINC02049-201ENST00000490647 C3orf80F5H4A9 247 aa11.1□□□□□ -0.63
LINC02049-201ENST00000490647 GPIHBP1Q8IV16 184 aa11.1□□□□□ -0.63
LINC02049-201ENST00000490647 FECHP22830 423 aa11.09□□□□□ -0.63
LINC02049-201ENST00000490647 TSKSQ9UJT2 592 aa11.08□□□□□ -0.64
LINC02049-201ENST00000490647 VPS9D1Q9Y2B5 631 aa11.08□□□□□ -0.64
LINC02049-201ENST00000490647 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
LINC02049-201ENST00000490647 ADGRD1Q6QNK2 874 aa11.06□□□□□ -0.64
LINC02049-201ENST00000490647 PADI6Q6TGC4 694 aa11.06□□□□□ -0.64
LINC02049-201ENST00000490647 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
LINC02049-201ENST00000490647 FCHSD2O94868 740 aa11.05□□□□□ -0.64
LINC02049-201ENST00000490647 PRSS12P56730 875 aa11.05□□□□□ -0.64
LINC02049-201ENST00000490647 KCNH8Q96L42 1107 aa11.05□□□□□ -0.64
LINC02049-201ENST00000490647 ZC3H15Q8WU90 426 aaKnown RBP11.04□□□□□ -0.64
LINC02049-201ENST00000490647 TRIM6-TRIM34B2RNG4 842 aa11.03□□□□□ -0.64
LINC02049-201ENST00000490647 FAM161AQ3B820 660 aa11.03□□□□□ -0.64
LINC02049-201ENST00000490647 TTC13Q8NBP0 860 aa11.03□□□□□ -0.64
LINC02049-201ENST00000490647 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
LINC02049-201ENST00000490647 HRO43593 1189 aa11.02□□□□□ -0.65
LINC02049-201ENST00000490647 KIAA1468Q9P260 1216 aa11.02□□□□□ -0.65
LINC02049-201ENST00000490647 TK2O00142 265 aa11.01□□□□□ -0.65
LINC02049-201ENST00000490647 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
LINC02049-201ENST00000490647 SMAPO00193 183 aa11□□□□□ -0.65
LINC02049-201ENST00000490647 GNPATO15228 680 aa11□□□□□ -0.65
LINC02049-201ENST00000490647 HIC1Q14526 733 aa11□□□□□ -0.65
LINC02049-201ENST00000490647 BHMG1C9JSJ3 638 aaPredicted RBP10.99□□□□□ -0.65
LINC02049-201ENST00000490647 SEPT9Q9UHD8 586 aaPredicted RBP10.98□□□□□ -0.65
LINC02049-201ENST00000490647 ZMYND10O75800 440 aa10.96□□□□□ -0.65
LINC02049-201ENST00000490647 RBM27Q9P2N5 1060 aaKnown RBP10.96□□□□□ -0.65
LINC02049-201ENST00000490647 RABGEF1Q9UJ41 708 aa10.96□□□□□ -0.65
LINC02049-201ENST00000490647 NUDT18Q6ZVK8 323 aa10.95□□□□□ -0.66
LINC02049-201ENST00000490647 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
LINC02049-201ENST00000490647 TATDN2Q93075 761 aa10.94□□□□□ -0.66
LINC02049-201ENST00000490647 PNMA3Q9UL41 463 aa10.94□□□□□ -0.66
LINC02049-201ENST00000490647 ADGRG1Q9Y653 693 aa10.94□□□□□ -0.66
LINC02049-201ENST00000490647 BARGINQ6ZT62 677 aa10.93□□□□□ -0.66
LINC02049-201ENST00000490647 PACS2Q86VP3 889 aa10.93□□□□□ -0.66
LINC02049-201ENST00000490647 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
LINC02049-201ENST00000490647 NLRP7Q8WX94 980 aa10.91□□□□□ -0.66
LINC02049-201ENST00000490647 PRKCSHP14314 528 aaPredicted RBP10.9□□□□□ -0.66
LINC02049-201ENST00000490647 PHOX2BQ99453 314 aa10.9□□□□□ -0.66
LINC02049-201ENST00000490647 EYA1Q99502 592 aa10.9□□□□□ -0.66
LINC02049-201ENST00000490647 NBPF26B4DH59 902 aa10.89□□□□□ -0.67
LINC02049-201ENST00000490647 MAP2K5Q13163 448 aa10.89□□□□□ -0.67
LINC02049-201ENST00000490647 MRPL50Q8N5N7 158 aaKnown RBP10.89□□□□□ -0.67
LINC02049-201ENST00000490647 CCDC102AQ96A19 550 aa10.88□□□□□ -0.67
LINC02049-201ENST00000490647 IRF6O14896 467 aa10.87□□□□□ -0.67
LINC02049-201ENST00000490647 NBPF3Q9H094 633 aa10.87□□□□□ -0.67
LINC02049-201ENST00000490647 METTL3Q86U44 580 aaKnown RBP10.86□□□□□ -0.67
LINC02049-201ENST00000490647 PXYLP1Q8TE99 480 aa10.86□□□□□ -0.67
LINC02049-201ENST00000490647 SLC24A3Q9HC58 644 aa10.86□□□□□ -0.67
LINC02049-201ENST00000490647 FAM98CQ17RN3 349 aaKnown RBP10.85□□□□□ -0.67
LINC02049-201ENST00000490647 KRI1Q8N9T8 703 aaKnown RBP10.85□□□□□ -0.67
LINC02049-201ENST00000490647 MYT1LQ9UL68 1186 aa10.85□□□□□ -0.67
LINC02049-201ENST00000490647 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
LINC02049-201ENST00000490647 ZFRQ96KR1 1074 aaKnown RBP10.84□□□□□ -0.67
LINC02049-201ENST00000490647 RCCD1A6NED2 376 aa10.83□□□□□ -0.68
LINC02049-201ENST00000490647 LAPTM4BQ86VI4 370 aa10.83□□□□□ -0.68
LINC02049-201ENST00000490647 RBM46Q8TBY0 533 aaKnown RBP10.83□□□□□ -0.68
LINC02049-201ENST00000490647 KCTD12Q96CX2 325 aaKnown RBP10.83□□□□□ -0.68
LINC02049-201ENST00000490647 STAC3Q96MF2 364 aa10.83□□□□□ -0.68
LINC02049-201ENST00000490647 BCAMP50895 628 aa10.81□□□□□ -0.68
LINC02049-201ENST00000490647 SAMD7Q7Z3H4 446 aa10.81□□□□□ -0.68
LINC02049-201ENST00000490647 OATP04181 439 aa10.8□□□□□ -0.68
LINC02049-201ENST00000490647 SWT1Q5T5J6 900 aaKnown RBP10.8□□□□□ -0.68
LINC02049-201ENST00000490647 WNT2BQ93097 391 aa10.8□□□□□ -0.68
LINC02049-201ENST00000490647 GOLGA8CPA6NN73 597 aa10.79□□□□□ -0.68
LINC02049-201ENST00000490647 RNF166Q96A37 237 aaPredicted RBP10.79□□□□□ -0.68
LINC02049-201ENST00000490647 TRIM66O15016 1216 aa10.77□□□□□ -0.69
LINC02049-201ENST00000490647 DNAJB2P25686 324 aa10.77□□□□□ -0.69
LINC02049-201ENST00000490647 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
LINC02049-201ENST00000490647 TMEM134Q9H6X4 195 aa10.77□□□□□ -0.69
LINC02049-201ENST00000490647 THSD4Q6ZMP0 1018 aa10.76□□□□□ -0.69
LINC02049-201ENST00000490647 ANKK1Q8NFD2 765 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms