RNA–Protein interactions for RNA: ENST00000490137.1

PTPN18-214, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-214ENST00000490137 PIP4K2BP78356 416 aa10.42□□□□□ -0.74
PTPN18-214ENST00000490137 EHMT2Q96KQ7 1210 aa10.42□□□□□ -0.74
PTPN18-214ENST00000490137 APLP2Q06481 763 aa10.41□□□□□ -0.74
PTPN18-214ENST00000490137 ARHGAP5Q13017 1502 aa10.41□□□□□ -0.74
PTPN18-214ENST00000490137 POLR1AO95602 1720 aaPredicted RBP10.41□□□□□ -0.74
PTPN18-214ENST00000490137 KIF14Q15058 1648 aa10.4□□□□□ -0.74
PTPN18-214ENST00000490137 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
PTPN18-214ENST00000490137 KIDINS220Q9ULH0 1771 aa10.39□□□□□ -0.75
PTPN18-214ENST00000490137 A2ML1A8K2U0 1454 aa10.39□□□□□ -0.75
PTPN18-214ENST00000490137 ALKQ9UM73 1620 aa10.39□□□□□ -0.75
PTPN18-214ENST00000490137 RGS17Q9UGC6 210 aaPredicted RBP10.38□□□□□ -0.75
PTPN18-214ENST00000490137 ABCC1P33527 1531 aa10.38□□□□□ -0.75
PTPN18-214ENST00000490137 DNMT1P26358 1616 aaKnown RBP10.37□□□□□ -0.75
PTPN18-214ENST00000490137 ITSN2Q9NZM3 1697 aa10.37□□□□□ -0.75
PTPN18-214ENST00000490137 CDK13Q14004 1512 aaKnown RBP10.37□□□□□ -0.75
PTPN18-214ENST00000490137 CDC42BPBQ9Y5S2 1711 aa10.36□□□□□ -0.75
PTPN18-214ENST00000490137 TROQ12816 1431 aaPredicted RBP10.36□□□□□ -0.75
PTPN18-214ENST00000490137 RNF17Q9BXT8 1623 aaKnown RBP10.36□□□□□ -0.75
PTPN18-214ENST00000490137 SYNMO15061 1565 aa10.35□□□□□ -0.75
PTPN18-214ENST00000490137 VWDEQ8N2E2 1590 aa10.35□□□□□ -0.75
PTPN18-214ENST00000490137 NEURL4Q96JN8 1562 aa10.35□□□□□ -0.75
PTPN18-214ENST00000490137 CLTCQ00610 1675 aaKnown RBP10.35□□□□□ -0.75
PTPN18-214ENST00000490137 RRBP1Q9P2E9 1410 aaKnown RBP10.35□□□□□ -0.75
PTPN18-214ENST00000490137 MED14O60244 1454 aa10.35□□□□□ -0.75
PTPN18-214ENST00000490137 DEPDC5O75140 1603 aa10.34□□□□□ -0.75
PTPN18-214ENST00000490137 PREX2Q70Z35 1606 aa10.34□□□□□ -0.75
PTPN18-214ENST00000490137 PLXNC1O60486 1568 aa10.34□□□□□ -0.75
PTPN18-214ENST00000490137 FMN1Q68DA7 1419 aa10.33□□□□□ -0.76
PTPN18-214ENST00000490137 MAP3K1Q13233 1512 aa10.33□□□□□ -0.76
PTPN18-214ENST00000490137 FAM135AQ9P2D6 1515 aa10.33□□□□□ -0.76
PTPN18-214ENST00000490137 DHX57Q6P158 1386 aaKnown RBP10.31□□□□□ -0.76
PTPN18-214ENST00000490137 ABCB7O75027 752 aa10.31□□□□□ -0.76
PTPN18-214ENST00000490137 ANKLE2Q86XL3 938 aa10.31□□□□□ -0.76
PTPN18-214ENST00000490137 MIER1Q8N108 512 aa10.31□□□□□ -0.76
PTPN18-214ENST00000490137 SAMD9LQ8IVG5 1584 aa10.31□□□□□ -0.76
PTPN18-214ENST00000490137 LRRC7Q96NW7 1537 aa10.29□□□□□ -0.76
PTPN18-214ENST00000490137 THEMISQ8N1K5 641 aaPredicted RBP10.29□□□□□ -0.76
PTPN18-214ENST00000490137 NPHP4O75161 1426 aaPredicted RBP10.28□□□□□ -0.76
PTPN18-214ENST00000490137 FAM135BQ49AJ0 1406 aa10.28□□□□□ -0.76
PTPN18-214ENST00000490137 POTEAQ6S8J7 498 aa10.28□□□□□ -0.76
PTPN18-214ENST00000490137 A2MP01023 1474 aa10.28□□□□□ -0.76
PTPN18-214ENST00000490137 NLRP1Q9C000 1473 aa10.28□□□□□ -0.76
PTPN18-214ENST00000490137 IQGAP1P46940 1657 aa10.27□□□□□ -0.77
PTPN18-214ENST00000490137 ATP7AQ04656 1500 aa10.27□□□□□ -0.77
PTPN18-214ENST00000490137 KIAA1107Q9UPP5 1409 aa10.26□□□□□ -0.77
PTPN18-214ENST00000490137 ADGBQ8N7X0 1667 aa10.26□□□□□ -0.77
PTPN18-214ENST00000490137 KCNA4P22459 653 aa10.26□□□□□ -0.77
PTPN18-214ENST00000490137 SPAG9O60271 1321 aaKnown RBP10.26□□□□□ -0.77
PTPN18-214ENST00000490137 INO80Q9ULG1 1556 aaPredicted RBP10.26□□□□□ -0.77
PTPN18-214ENST00000490137 TNRQ92752 1358 aa10.26□□□□□ -0.77
PTPN18-214ENST00000490137 PLEKHH2Q8IVE3 1493 aa10.25□□□□□ -0.77
PTPN18-214ENST00000490137 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
PTPN18-214ENST00000490137 CDC42BPAQ5VT25 1732 aa10.24□□□□□ -0.77
PTPN18-214ENST00000490137 PZPP20742 1482 aa10.24□□□□□ -0.77
PTPN18-214ENST00000490137 SLC4A2P04920 1241 aa10.24□□□□□ -0.77
PTPN18-214ENST00000490137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.24□□□□□ -0.77
PTPN18-214ENST00000490137 STRCP1A6NGW2 1772 aa10.24□□□□□ -0.77
PTPN18-214ENST00000490137 KDM5DQ9BY66 1539 aa10.23□□□□□ -0.77
PTPN18-214ENST00000490137 UGGT1Q9NYU2 1555 aa10.23□□□□□ -0.77
PTPN18-214ENST00000490137 GGT6Q6P531 493 aa10.22□□□□□ -0.77
PTPN18-214ENST00000490137 UPF1Q92900 1129 aaKnown RBP eCLIP10.22□□□□□ -0.77
PTPN18-214ENST00000490137 CCNB3Q8WWL7 1395 aa10.22□□□□□ -0.77
PTPN18-214ENST00000490137 CCDC18Q5T9S5 1454 aa10.22□□□□□ -0.77
PTPN18-214ENST00000490137 SETD1AO15047 1707 aaKnown RBP10.21□□□□□ -0.77
PTPN18-214ENST00000490137 MIA2Q96PC5 1412 aa10.21□□□□□ -0.78
PTPN18-214ENST00000490137 SYCP2Q9BX26 1530 aa10.21□□□□□ -0.78
PTPN18-214ENST00000490137 RANGAP1P46060 587 aaPredicted RBP10.2□□□□□ -0.78
PTPN18-214ENST00000490137 YTHDC1Q96MU7 727 aaKnown RBP10.2□□□□□ -0.78
PTPN18-214ENST00000490137 ZC3H13Q5T200 1668 aaKnown RBP10.19□□□□□ -0.78
PTPN18-214ENST00000490137 LRRC9Q6ZRR7 1453 aa10.19□□□□□ -0.78
PTPN18-214ENST00000490137 RTEL1-TNFRSF6BF6WH68 1400 aa10.19□□□□□ -0.78
PTPN18-214ENST00000490137 ZNF219Q9P2Y4 722 aaPredicted RBP10.19□□□□□ -0.78
PTPN18-214ENST00000490137 LRRIQ1Q96JM4 1722 aa10.19□□□□□ -0.78
PTPN18-214ENST00000490137 CDK12Q9NYV4 1490 aaPredicted RBP10.18□□□□□ -0.78
PTPN18-214ENST00000490137 ATP1B4Q9UN42 357 aaPredicted RBP10.18□□□□□ -0.78
PTPN18-214ENST00000490137 XIRP1Q702N8 1843 aaKnown RBP10.18□□□□□ -0.78
PTPN18-214ENST00000490137 ZNF772Q68DY9 489 aaPredicted RBP10.17□□□□□ -0.78
PTPN18-214ENST00000490137 DHX29Q7Z478 1369 aaKnown RBP10.16□□□□□ -0.78
PTPN18-214ENST00000490137 GPATCH8Q9UKJ3 1502 aaKnown RBP10.16□□□□□ -0.78
PTPN18-214ENST00000490137 ARHGAP35Q9NRY4 1499 aa10.16□□□□□ -0.78
PTPN18-214ENST00000490137 JCADQ9P266 1359 aa10.15□□□□□ -0.78
PTPN18-214ENST00000490137 SUPT16HQ9Y5B9 1047 aaKnown RBP10.15□□□□□ -0.78
PTPN18-214ENST00000490137 ROBO1Q9Y6N7 1651 aa10.15□□□□□ -0.79
PTPN18-214ENST00000490137 TIAM1Q13009 1591 aa10.14□□□□□ -0.79
PTPN18-214ENST00000490137 HNRNPMP52272 730 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTPN18-214ENST00000490137 FBXO31Q5XUX0 539 aaPredicted RBP10.14□□□□□ -0.79
PTPN18-214ENST00000490137 CASKIN1Q8WXD9 1431 aa10.14□□□□□ -0.79
PTPN18-214ENST00000490137 SPATA31A6Q5VVP1 1343 aa10.13□□□□□ -0.79
PTPN18-214ENST00000490137 SCAF11Q99590 1463 aaKnown RBP10.13□□□□□ -0.79
PTPN18-214ENST00000490137 CHRDL2Q6WN34 429 aa10.13□□□□□ -0.79
PTPN18-214ENST00000490137 FGD6Q6ZV73 1430 aa10.13□□□□□ -0.79
PTPN18-214ENST00000490137 WASHC2CQ9Y4E1 1318 aa10.12□□□□□ -0.79
PTPN18-214ENST00000490137 ZNF777Q9ULD5 760 aaPredicted RBP10.12□□□□□ -0.79
PTPN18-214ENST00000490137 SLIT1O75093 1534 aa10.12□□□□□ -0.79
PTPN18-214ENST00000490137 ARHGAP23Q9P227 1491 aa10.11□□□□□ -0.79
PTPN18-214ENST00000490137 SETD5Q9C0A6 1442 aa10.11□□□□□ -0.79
PTPN18-214ENST00000490137 RBM42Q9BTD8 480 aaKnown RBP10.11□□□□□ -0.79
PTPN18-214ENST00000490137 CFDP1Q9UEE9 299 aaPredicted RBP10.11□□□□□ -0.79
PTPN18-214ENST00000490137 ABCC3O15438 1527 aa10.11□□□□□ -0.79
PTPN18-214ENST00000490137 CCER2I3L3R5 266 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms