RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 TCOF1Q13428 1488 aaKnown RBP7.11□□□□□ -1.27
RTN1-207ENST00000490111 CCDC9Q9Y3X0 531 aaKnown RBP7.1□□□□□ -1.27
RTN1-207ENST00000490111 SHANK2Q9UPX8 1470 aa7.1□□□□□ -1.27
RTN1-207ENST00000490111 NPATQ14207 1427 aa7.1□□□□□ -1.27
RTN1-207ENST00000490111 CTTNBP2Q8WZ74 1663 aa7.09□□□□□ -1.27
RTN1-207ENST00000490111 SUPT6HQ7KZ85 1726 aaKnown RBP7.08□□□□□ -1.28
RTN1-207ENST00000490111 PLEKHD1A6NEE1 506 aa7.08□□□□□ -1.28
RTN1-207ENST00000490111 CNTLNQ9NXG0 1405 aa7.08□□□□□ -1.28
RTN1-207ENST00000490111 AGLP35573 1532 aa7.07□□□□□ -1.28
RTN1-207ENST00000490111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.07□□□□□ -1.28
RTN1-207ENST00000490111 P3H3Q8IVL6 736 aa7.07□□□□□ -1.28
RTN1-207ENST00000490111 ZMYND15Q9H091 742 aa7.07□□□□□ -1.28
RTN1-207ENST00000490111 RSPH6AQ9H0K4 717 aa7.07□□□□□ -1.28
RTN1-207ENST00000490111 LOC105371045A0A1W2PR82 267 aa7.06□□□□□ -1.28
RTN1-207ENST00000490111 LMOD2Q6P5Q4 547 aa7.06□□□□□ -1.28
RTN1-207ENST00000490111 HS6ST3Q8IZP7 471 aa7.06□□□□□ -1.28
RTN1-207ENST00000490111 MYT1LQ9UL68 1186 aa7.06□□□□□ -1.28
RTN1-207ENST00000490111 REREQ9P2R6 1566 aa7.06□□□□□ -1.28
RTN1-207ENST00000490111 ZNF142P52746 1687 aaPredicted RBP7.06□□□□□ -1.28
RTN1-207ENST00000490111 RAPGEF6Q8TEU7 1601 aa7.05□□□□□ -1.28
RTN1-207ENST00000490111 NEUROD2Q15784 382 aa7.05□□□□□ -1.28
RTN1-207ENST00000490111 ZMYM3Q14202 1370 aa7.05□□□□□ -1.28
RTN1-207ENST00000490111 MYO3AQ8NEV4 1616 aa7.05□□□□□ -1.28
RTN1-207ENST00000490111 DIP2CQ9Y2E4 1556 aa7.04□□□□□ -1.28
RTN1-207ENST00000490111 CEP170BQ9Y4F5 1589 aaPredicted RBP7.04□□□□□ -1.28
RTN1-207ENST00000490111 MKRN4PQ13434 485 aaPredicted RBP7.04□□□□□ -1.28
RTN1-207ENST00000490111 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.04□□□□□ -1.28
RTN1-207ENST00000490111 AFAP1Q8N556 730 aa7.04□□□□□ -1.28
RTN1-207ENST00000490111 MROH2AA6NES4 1674 aa7.03□□□□□ -1.28
RTN1-207ENST00000490111 PLCH2O75038 1416 aa7.03□□□□□ -1.28
RTN1-207ENST00000490111 SAMD1Q6SPF0 538 aaPredicted RBP7.03□□□□□ -1.28
RTN1-207ENST00000490111 ZNF518AQ6AHZ1 1483 aa7.03□□□□□ -1.28
RTN1-207ENST00000490111 VWDEQ8N2E2 1590 aa7.03□□□□□ -1.28
RTN1-207ENST00000490111 ZBTB7CA1YPR0 619 aa7.02□□□□□ -1.29
RTN1-207ENST00000490111 EFCAB2Q5VUJ9 269 aa7.02□□□□□ -1.29
RTN1-207ENST00000490111 TRIM52Q96A61 297 aa7.02□□□□□ -1.29
RTN1-207ENST00000490111 ZNF219Q9P2Y4 722 aaPredicted RBP7.02□□□□□ -1.29
RTN1-207ENST00000490111 NUP153P49790 1475 aaKnown RBP7.02□□□□□ -1.29
RTN1-207ENST00000490111 RNF17Q9BXT8 1623 aaKnown RBP7.01□□□□□ -1.29
RTN1-207ENST00000490111 KDM5CP41229 1560 aa7.01□□□□□ -1.29
RTN1-207ENST00000490111 C1orf115Q9H7X2 142 aa7.01□□□□□ -1.29
RTN1-207ENST00000490111 POLR1AO95602 1720 aaPredicted RBP7.01□□□□□ -1.29
RTN1-207ENST00000490111 LRRC7Q96NW7 1537 aa7.01□□□□□ -1.29
RTN1-207ENST00000490111 NEURL4Q96JN8 1562 aa7□□□□□ -1.29
RTN1-207ENST00000490111 ABCA6Q8N139 1617 aa7□□□□□ -1.29
RTN1-207ENST00000490111 MLH3Q9UHC1 1453 aa6.99□□□□□ -1.29
RTN1-207ENST00000490111 DNMT1P26358 1616 aaKnown RBP6.99□□□□□ -1.29
RTN1-207ENST00000490111 EIF5BO60841 1220 aaKnown RBP6.99□□□□□ -1.29
RTN1-207ENST00000490111 ARID3AQ99856 593 aa6.99□□□□□ -1.29
RTN1-207ENST00000490111 A2ML1A8K2U0 1454 aa6.98□□□□□ -1.29
RTN1-207ENST00000490111 NKX1-1Q15270 411 aaPredicted RBP6.98□□□□□ -1.29
RTN1-207ENST00000490111 IFFO2Q5TF58 517 aa6.98□□□□□ -1.29
RTN1-207ENST00000490111 ANKLE2Q86XL3 938 aa6.98□□□□□ -1.29
RTN1-207ENST00000490111 NECTIN2Q92692 538 aa6.98□□□□□ -1.29
RTN1-207ENST00000490111 CLTCQ00610 1675 aaKnown RBP6.97□□□□□ -1.29
RTN1-207ENST00000490111 GTPBP6O43824 516 aaPredicted RBP6.97□□□□□ -1.29
RTN1-207ENST00000490111 FAM135BQ49AJ0 1406 aa6.97□□□□□ -1.29
RTN1-207ENST00000490111 ZNF772Q68DY9 489 aaPredicted RBP6.97□□□□□ -1.29
RTN1-207ENST00000490111 ZRANB1Q9UGI0 708 aa6.97□□□□□ -1.29
RTN1-207ENST00000490111 STRCP1A6NGW2 1772 aa6.97□□□□□ -1.29
RTN1-207ENST00000490111 MYO5CQ9NQX4 1742 aa6.96□□□□□ -1.29
RTN1-207ENST00000490111 SYNMO15061 1565 aa6.96□□□□□ -1.29
RTN1-207ENST00000490111 PDIA4P13667 645 aaKnown RBP6.96□□□□□ -1.3
RTN1-207ENST00000490111 RXRBP28702 533 aa6.96□□□□□ -1.3
RTN1-207ENST00000490111 SAMD9Q5K651 1589 aa6.95□□□□□ -1.3
RTN1-207ENST00000490111 NPHP4O75161 1426 aaPredicted RBP6.95□□□□□ -1.3
RTN1-207ENST00000490111 RBM33Q96EV2 1170 aaKnown RBP6.95□□□□□ -1.3
RTN1-207ENST00000490111 MED14O60244 1454 aa6.95□□□□□ -1.3
RTN1-207ENST00000490111 SETBP1Q9Y6X0 1596 aa6.95□□□□□ -1.3
RTN1-207ENST00000490111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.94□□□□□ -1.3
RTN1-207ENST00000490111 CDK12Q9NYV4 1490 aaPredicted RBP6.93□□□□□ -1.3
RTN1-207ENST00000490111 THEMISQ8N1K5 641 aaPredicted RBP6.93□□□□□ -1.3
RTN1-207ENST00000490111 ZC3H15Q8WU90 426 aaKnown RBP6.93□□□□□ -1.3
RTN1-207ENST00000490111 SLC24A3Q9HC58 644 aa6.93□□□□□ -1.3
RTN1-207ENST00000490111 DEPDC5O75140 1603 aa6.93□□□□□ -1.3
RTN1-207ENST00000490111 KIDINS220Q9ULH0 1771 aa6.92□□□□□ -1.3
RTN1-207ENST00000490111 ARHGAP5Q13017 1502 aa6.92□□□□□ -1.3
RTN1-207ENST00000490111 CDK13Q14004 1512 aaKnown RBP6.92□□□□□ -1.3
RTN1-207ENST00000490111 IGSF3O75054 1194 aa6.92□□□□□ -1.3
RTN1-207ENST00000490111 MEX3CQ5U5Q3 659 aaKnown RBP6.92□□□□□ -1.3
RTN1-207ENST00000490111 IQGAP1P46940 1657 aa6.92□□□□□ -1.3
RTN1-207ENST00000490111 JCADQ9P266 1359 aa6.92□□□□□ -1.3
RTN1-207ENST00000490111 ABCC1P33527 1531 aa6.91□□□□□ -1.3
RTN1-207ENST00000490111 ROBO1Q9Y6N7 1651 aa6.91□□□□□ -1.3
RTN1-207ENST00000490111 ITSN2Q9NZM3 1697 aa6.9□□□□□ -1.3
RTN1-207ENST00000490111 XIRP1Q702N8 1843 aaKnown RBP6.9□□□□□ -1.3
RTN1-207ENST00000490111 GGT6Q6P531 493 aa6.9□□□□□ -1.3
RTN1-207ENST00000490111 KCNV2Q8TDN2 545 aa6.9□□□□□ -1.3
RTN1-207ENST00000490111 NUTM2BA6NNL0 878 aaPredicted RBP6.89□□□□□ -1.31
RTN1-207ENST00000490111 NUTM2EB1AL46 878 aaPredicted RBP6.89□□□□□ -1.31
RTN1-207ENST00000490111 NUTM2DQ5VT03 806 aaPredicted RBP6.89□□□□□ -1.31
RTN1-207ENST00000490111 NUTM2AQ8IVF1 878 aaPredicted RBP6.89□□□□□ -1.31
RTN1-207ENST00000490111 SPATA31A6Q5VVP1 1343 aa6.89□□□□□ -1.31
RTN1-207ENST00000490111 TNRQ92752 1358 aa6.89□□□□□ -1.31
RTN1-207ENST00000490111 PRXQ9BXM0 1461 aa6.89□□□□□ -1.31
RTN1-207ENST00000490111 LRP6O75581 1613 aa6.89□□□□□ -1.31
RTN1-207ENST00000490111 PHLPP1O60346 1717 aa6.88□□□□□ -1.31
RTN1-207ENST00000490111 FBXO31Q5XUX0 539 aaPredicted RBP6.88□□□□□ -1.31
RTN1-207ENST00000490111 UGGT1Q9NYU2 1555 aa6.87□□□□□ -1.31
RTN1-207ENST00000490111 KDM5DQ9BY66 1539 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms