RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 NBR1Q14596 966 aa17.94■□□□□ 0.46
TNXB-206ENST00000490077 PANK3Q9H999 370 aa17.92■□□□□ 0.46
TNXB-206ENST00000490077 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
TNXB-206ENST00000490077 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
TNXB-206ENST00000490077 SMG6Q86US8 1419 aaKnown RBP17.92■□□□□ 0.46
TNXB-206ENST00000490077 ADCY10Q96PN6 1610 aa17.91■□□□□ 0.46
TNXB-206ENST00000490077 CROCC2H7BZ55 1655 aa17.9■□□□□ 0.46
TNXB-206ENST00000490077 TESK2Q96S53 571 aa17.9■□□□□ 0.46
TNXB-206ENST00000490077 FANCIQ9NVI1 1328 aa17.9■□□□□ 0.46
TNXB-206ENST00000490077 CLASP1Q7Z460 1538 aa17.9■□□□□ 0.46
TNXB-206ENST00000490077 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
TNXB-206ENST00000490077 ADGBQ8N7X0 1667 aa17.89■□□□□ 0.45
TNXB-206ENST00000490077 RALGAPBQ86X10 1494 aa17.89■□□□□ 0.45
TNXB-206ENST00000490077 SAMD9LQ8IVG5 1584 aa17.88■□□□□ 0.45
TNXB-206ENST00000490077 NPM2Q86SE8 214 aaKnown RBP17.88■□□□□ 0.45
TNXB-206ENST00000490077 C20orf194Q5TEA3 1177 aa17.87■□□□□ 0.45
TNXB-206ENST00000490077 BCL11AQ9H165 835 aa17.87■□□□□ 0.45
TNXB-206ENST00000490077 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
TNXB-206ENST00000490077 SYCP2Q9BX26 1530 aa17.87■□□□□ 0.45
TNXB-206ENST00000490077 ITSN2Q9NZM3 1697 aa17.87■□□□□ 0.45
TNXB-206ENST00000490077 ARHGEF12Q9NZN5 1544 aa17.86■□□□□ 0.45
TNXB-206ENST00000490077 FAM135AQ9P2D6 1515 aa17.86■□□□□ 0.45
TNXB-206ENST00000490077 MYBBP1AQ9BQG0 1328 aaKnown RBP17.86■□□□□ 0.45
TNXB-206ENST00000490077 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
TNXB-206ENST00000490077 A2MP01023 1474 aa17.84■□□□□ 0.45
TNXB-206ENST00000490077 ERICH6Q7L0X2 663 aa17.84■□□□□ 0.45
TNXB-206ENST00000490077 CDC42BPBQ9Y5S2 1711 aa17.84■□□□□ 0.45
TNXB-206ENST00000490077 CCDC144AA2RUR9 1427 aa17.83■□□□□ 0.45
TNXB-206ENST00000490077 PRAG1Q86YV5 1406 aa17.83■□□□□ 0.45
TNXB-206ENST00000490077 TTC37Q6PGP7 1564 aa17.83■□□□□ 0.44
TNXB-206ENST00000490077 LRPPRCP42704 1394 aaKnown RBP17.83■□□□□ 0.44
TNXB-206ENST00000490077 POLR1AO95602 1720 aaPredicted RBP17.83■□□□□ 0.44
TNXB-206ENST00000490077 RRP1P56182 461 aaKnown RBP17.81■□□□□ 0.44
TNXB-206ENST00000490077 KDM5DQ9BY66 1539 aa17.81■□□□□ 0.44
TNXB-206ENST00000490077 ADAMTS8Q9UP79 889 aa17.81■□□□□ 0.44
TNXB-206ENST00000490077 RCAN3Q9UKA8 241 aa17.8■□□□□ 0.44
TNXB-206ENST00000490077 ABCC2Q92887 1545 aa17.8■□□□□ 0.44
TNXB-206ENST00000490077 ARHGAP5Q13017 1502 aa17.8■□□□□ 0.44
TNXB-206ENST00000490077 CCDC141Q6ZP82 1450 aa17.78■□□□□ 0.44
TNXB-206ENST00000490077 CCDC146Q8IYE0 955 aa17.78■□□□□ 0.44
TNXB-206ENST00000490077 ERICH6BQ5W0A0 696 aa17.77■□□□□ 0.44
TNXB-206ENST00000490077 TRAPPC8Q9Y2L5 1435 aa17.77■□□□□ 0.44
TNXB-206ENST00000490077 NLRP13Q86W25 1043 aa17.76■□□□□ 0.43
TNXB-206ENST00000490077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.76■□□□□ 0.43
TNXB-206ENST00000490077 RALBP1Q15311 655 aa17.75■□□□□ 0.43
TNXB-206ENST00000490077 PARD3Q8TEW0 1356 aa17.75■□□□□ 0.43
TNXB-206ENST00000490077 CRBNQ96SW2 442 aa17.75■□□□□ 0.43
TNXB-206ENST00000490077 BRD4O60885 1362 aaPredicted RBP17.74■□□□□ 0.43
TNXB-206ENST00000490077 KTN1Q86UP2 1357 aaKnown RBP17.74■□□□□ 0.43
TNXB-206ENST00000490077 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
TNXB-206ENST00000490077 MYT1LQ9UL68 1186 aa17.74■□□□□ 0.43
TNXB-206ENST00000490077 SHANK2Q9UPX8 1470 aa17.74■□□□□ 0.43
TNXB-206ENST00000490077 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
TNXB-206ENST00000490077 NOP58Q9Y2X3 529 aaKnown RBP17.72■□□□□ 0.43
TNXB-206ENST00000490077 MAGI2Q86UL8 1455 aa17.71■□□□□ 0.43
TNXB-206ENST00000490077 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.43
TNXB-206ENST00000490077 ARID4BQ4LE39 1312 aaPredicted RBP17.71■□□□□ 0.43
TNXB-206ENST00000490077 TRPM1Q7Z4N2 1603 aa17.7■□□□□ 0.42
TNXB-206ENST00000490077 SLC4A3P48751 1232 aa17.69■□□□□ 0.42
TNXB-206ENST00000490077 PLEKHH1Q9ULM0 1364 aa17.69■□□□□ 0.42
TNXB-206ENST00000490077 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
TNXB-206ENST00000490077 ZCCHC11Q5TAX3 1644 aaKnown RBP17.69■□□□□ 0.42
TNXB-206ENST00000490077 TNNT2P45379 298 aaPredicted RBP17.69■□□□□ 0.42
TNXB-206ENST00000490077 CFAP70Q5T0N1 1121 aa17.69■□□□□ 0.42
TNXB-206ENST00000490077 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
TNXB-206ENST00000490077 UHRF1BP1LA0JNW5 1464 aa17.69■□□□□ 0.42
TNXB-206ENST00000490077 PREX2Q70Z35 1606 aa17.68■□□□□ 0.42
TNXB-206ENST00000490077 PPP2R1AP30153 589 aa17.66■□□□□ 0.42
TNXB-206ENST00000490077 DEKP35659 375 aaKnown RBP17.66■□□□□ 0.42
TNXB-206ENST00000490077 ARHGEF5Q12774 1597 aa17.65■□□□□ 0.42
TNXB-206ENST00000490077 TMF1P82094 1093 aa17.65■□□□□ 0.42
TNXB-206ENST00000490077 COL17A1Q9UMD9 1497 aaPredicted RBP17.65■□□□□ 0.42
TNXB-206ENST00000490077 UGGT1Q9NYU2 1555 aa17.65■□□□□ 0.42
TNXB-206ENST00000490077 E9PCH4 1651 aa17.64■□□□□ 0.42
TNXB-206ENST00000490077 KIF3BO15066 747 aa17.64■□□□□ 0.41
TNXB-206ENST00000490077 AMER1Q5JTC6 1135 aaPredicted RBP17.64■□□□□ 0.41
TNXB-206ENST00000490077 PDE4AP27815 886 aa17.64■□□□□ 0.41
TNXB-206ENST00000490077 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
TNXB-206ENST00000490077 ADGRF5Q8IZF2 1346 aa17.63■□□□□ 0.41
TNXB-206ENST00000490077 GPRASP1Q5JY77 1395 aa17.62■□□□□ 0.41
TNXB-206ENST00000490077 IPO9Q96P70 1041 aaKnown RBP17.62■□□□□ 0.41
TNXB-206ENST00000490077 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
TNXB-206ENST00000490077 SPAG9O60271 1321 aaKnown RBP17.61■□□□□ 0.41
TNXB-206ENST00000490077 CHGAP10645 457 aaKnown RBP17.61■□□□□ 0.41
TNXB-206ENST00000490077 EFCAB2Q5VUJ9 269 aa17.61■□□□□ 0.41
TNXB-206ENST00000490077 KNSTRNQ9Y448 316 aa17.61■□□□□ 0.41
TNXB-206ENST00000490077 MYO5CQ9NQX4 1742 aa17.6■□□□□ 0.41
TNXB-206ENST00000490077 BCAR3O75815 825 aa17.6■□□□□ 0.41
TNXB-206ENST00000490077 WDR7Q9Y4E6 1490 aa17.6■□□□□ 0.41
TNXB-206ENST00000490077 NEUROD2Q15784 382 aa17.6■□□□□ 0.41
TNXB-206ENST00000490077 APAF1O14727 1248 aa17.59■□□□□ 0.41
TNXB-206ENST00000490077 TMEM132EQ6IEE7 984 aa17.59■□□□□ 0.41
TNXB-206ENST00000490077 RRP7AQ9Y3A4 280 aaKnown RBP17.59■□□□□ 0.41
TNXB-206ENST00000490077 DUSP27Q5VZP5 1158 aa17.58■□□□□ 0.4
TNXB-206ENST00000490077 RSPH4AQ5TD94 716 aa17.57■□□□□ 0.4
TNXB-206ENST00000490077 PRDM15P57071 1507 aaPredicted RBP17.57■□□□□ 0.4
TNXB-206ENST00000490077 ANP32AP39687 249 aaKnown RBP17.56■□□□□ 0.4
TNXB-206ENST00000490077 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
TNXB-206ENST00000490077 TNNQ9UQP3 1299 aa17.56■□□□□ 0.4
TNXB-206ENST00000490077 SCAPERQ9BY12 1400 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms