RNA–Protein interactions for RNA: ENST00000489977.5

SKAP2-206, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 5

Gene SKAP2, Length 679 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-206ENST00000489977 PDIA6Q15084 440 aa11.45□□□□□ -0.58
SKAP2-206ENST00000489977 E2F4Q16254 413 aa11.45□□□□□ -0.58
SKAP2-206ENST00000489977 PROX2Q3B8N5 592 aa11.45□□□□□ -0.58
SKAP2-206ENST00000489977 DDX12PQ92771 950 aa11.45□□□□□ -0.58
SKAP2-206ENST00000489977 C6orf132Q5T0Z8 1188 aa11.44□□□□□ -0.58
SKAP2-206ENST00000489977 MRPL50Q8N5N7 158 aaKnown RBP11.42□□□□□ -0.58
SKAP2-206ENST00000489977 ARIH1Q9Y4X5 557 aaPredicted RBP11.42□□□□□ -0.58
SKAP2-206ENST00000489977 SPDYE16A6NNV3 312 aaPredicted RBP11.41□□□□□ -0.58
SKAP2-206ENST00000489977 WDR70Q9NW82 654 aa11.41□□□□□ -0.58
SKAP2-206ENST00000489977 RBM33Q96EV2 1170 aaKnown RBP11.4□□□□□ -0.58
SKAP2-206ENST00000489977 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
SKAP2-206ENST00000489977 RABGEF1Q9UJ41 708 aa11.4□□□□□ -0.58
SKAP2-206ENST00000489977 THSD4Q6ZMP0 1018 aa11.39□□□□□ -0.59
SKAP2-206ENST00000489977 NBPF3Q9H094 633 aa11.39□□□□□ -0.59
SKAP2-206ENST00000489977 PTPN5P54829 565 aa11.38□□□□□ -0.59
SKAP2-206ENST00000489977 WNT2BQ93097 391 aa11.37□□□□□ -0.59
SKAP2-206ENST00000489977 TSHZ2Q9NRE2 1034 aa11.37□□□□□ -0.59
SKAP2-206ENST00000489977 GOLGA8CPA6NN73 597 aa11.36□□□□□ -0.59
SKAP2-206ENST00000489977 EN1Q05925 392 aaPredicted RBP11.36□□□□□ -0.59
SKAP2-206ENST00000489977 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
SKAP2-206ENST00000489977 PRIM1P49642 420 aaKnown RBP11.35□□□□□ -0.59
SKAP2-206ENST00000489977 NBR1Q14596 966 aa11.35□□□□□ -0.59
SKAP2-206ENST00000489977 KIAA1468Q9P260 1216 aa11.35□□□□□ -0.59
SKAP2-206ENST00000489977 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
SKAP2-206ENST00000489977 TRIM6-TRIM34B2RNG4 842 aa11.32□□□□□ -0.6
SKAP2-206ENST00000489977 MAP3K7O43318 606 aa11.31□□□□□ -0.6
SKAP2-206ENST00000489977 GRXCR2A6NFK2 248 aa11.3□□□□□ -0.6
SKAP2-206ENST00000489977 LAPTM4BQ86VI4 370 aa11.29□□□□□ -0.6
SKAP2-206ENST00000489977 OSBPP22059 807 aa11.28□□□□□ -0.6
SKAP2-206ENST00000489977 SEPT9Q9UHD8 586 aaPredicted RBP11.28□□□□□ -0.6
SKAP2-206ENST00000489977 TSKSQ9UJT2 592 aa11.28□□□□□ -0.6
SKAP2-206ENST00000489977 ZFRQ96KR1 1074 aaKnown RBP11.27□□□□□ -0.61
SKAP2-206ENST00000489977 ANKK1Q8NFD2 765 aa11.26□□□□□ -0.61
SKAP2-206ENST00000489977 BCAMP50895 628 aa11.25□□□□□ -0.61
SKAP2-206ENST00000489977 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
SKAP2-206ENST00000489977 SOWAHBA6NEL2 793 aa11.24□□□□□ -0.61
SKAP2-206ENST00000489977 CDHR5Q9HBB8 845 aa11.23□□□□□ -0.61
SKAP2-206ENST00000489977 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
SKAP2-206ENST00000489977 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
SKAP2-206ENST00000489977 C3orf80F5H4A9 247 aa11.21□□□□□ -0.61
SKAP2-206ENST00000489977 PRSS12P56730 875 aa11.21□□□□□ -0.61
SKAP2-206ENST00000489977 IFFO2Q5TF58 517 aa11.21□□□□□ -0.61
SKAP2-206ENST00000489977 KCNV2Q8TDN2 545 aa11.21□□□□□ -0.61
SKAP2-206ENST00000489977 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
SKAP2-206ENST00000489977 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
SKAP2-206ENST00000489977 CERKQ8TCT0 537 aa11.19□□□□□ -0.62
SKAP2-206ENST00000489977 SMAPO00193 183 aa11.18□□□□□ -0.62
SKAP2-206ENST00000489977 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
SKAP2-206ENST00000489977 NPDC1Q9NQX5 325 aaPredicted RBP11.17□□□□□ -0.62
SKAP2-206ENST00000489977 MLLT3P42568 568 aaPredicted RBP11.16□□□□□ -0.62
SKAP2-206ENST00000489977 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.15□□□□□ -0.62
SKAP2-206ENST00000489977 TATDN2Q93075 761 aa11.14□□□□□ -0.63
SKAP2-206ENST00000489977 LRCH3Q96II8 777 aa11.13□□□□□ -0.63
SKAP2-206ENST00000489977 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
SKAP2-206ENST00000489977 ITGBL1O95965 494 aaPredicted RBP11.12□□□□□ -0.63
SKAP2-206ENST00000489977 NYAP1Q6ZVC0 841 aa11.12□□□□□ -0.63
SKAP2-206ENST00000489977 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
SKAP2-206ENST00000489977 RBM27Q9P2N5 1060 aaKnown RBP11.12□□□□□ -0.63
SKAP2-206ENST00000489977 TSR3Q9UJK0 312 aaKnown RBP11.12□□□□□ -0.63
SKAP2-206ENST00000489977 HPS5Q9UPZ3 1129 aa11.12□□□□□ -0.63
SKAP2-206ENST00000489977 A0A0G2JS52 829 aa11.1□□□□□ -0.63
SKAP2-206ENST00000489977 SAMD7Q7Z3H4 446 aa11.1□□□□□ -0.63
SKAP2-206ENST00000489977 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
SKAP2-206ENST00000489977 PLCB2Q00722 1185 aa11.09□□□□□ -0.63
SKAP2-206ENST00000489977 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
SKAP2-206ENST00000489977 PADI6Q6TGC4 694 aa11.08□□□□□ -0.64
SKAP2-206ENST00000489977 PPP4CP60510 307 aa11.04□□□□□ -0.64
SKAP2-206ENST00000489977 P3H3Q8IVL6 736 aa11.03□□□□□ -0.64
SKAP2-206ENST00000489977 SEMA3EO15041 775 aa11.02□□□□□ -0.65
SKAP2-206ENST00000489977 RGS20O76081 388 aa11.02□□□□□ -0.65
SKAP2-206ENST00000489977 KCNC4Q03721 635 aa11.01□□□□□ -0.65
SKAP2-206ENST00000489977 PTGDRQ13258 359 aa11.01□□□□□ -0.65
SKAP2-206ENST00000489977 EYA1Q99502 592 aa11.01□□□□□ -0.65
SKAP2-206ENST00000489977 TJAP1Q5JTD0 557 aa10.98□□□□□ -0.65
SKAP2-206ENST00000489977 SWT1Q5T5J6 900 aaKnown RBP10.98□□□□□ -0.65
SKAP2-206ENST00000489977 NUTM2FA1L443 756 aa10.95□□□□□ -0.66
SKAP2-206ENST00000489977 APLP1P51693 650 aa10.95□□□□□ -0.66
SKAP2-206ENST00000489977 HDGFP51858 240 aaKnown RBP10.95□□□□□ -0.66
SKAP2-206ENST00000489977 RNF40O75150 1001 aa10.93□□□□□ -0.66
SKAP2-206ENST00000489977 MTRQ99707 1265 aa10.93□□□□□ -0.66
SKAP2-206ENST00000489977 TESPA1A2RU30 521 aaPredicted RBP10.92□□□□□ -0.66
SKAP2-206ENST00000489977 ADGRG1Q9Y653 693 aa10.92□□□□□ -0.66
SKAP2-206ENST00000489977 FAM161AQ3B820 660 aa10.91□□□□□ -0.66
SKAP2-206ENST00000489977 SLF2Q8IX21 1173 aa10.91□□□□□ -0.66
SKAP2-206ENST00000489977 HAP1P54257 671 aaPredicted RBP10.9□□□□□ -0.66
SKAP2-206ENST00000489977 ZNF516Q92618 1163 aa10.9□□□□□ -0.66
SKAP2-206ENST00000489977 IL21Q9HBE4 155 aa10.9□□□□□ -0.66
SKAP2-206ENST00000489977 KDM2AQ9Y2K7 1162 aa10.9□□□□□ -0.66
SKAP2-206ENST00000489977 FCHSD2O94868 740 aa10.89□□□□□ -0.67
SKAP2-206ENST00000489977 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
SKAP2-206ENST00000489977 DNAJB2P25686 324 aa10.87□□□□□ -0.67
SKAP2-206ENST00000489977 RBM46Q8TBY0 533 aaKnown RBP10.87□□□□□ -0.67
SKAP2-206ENST00000489977 RCCD1A6NED2 376 aa10.85□□□□□ -0.67
SKAP2-206ENST00000489977 NECTIN2Q92692 538 aa10.85□□□□□ -0.67
SKAP2-206ENST00000489977 IRX2Q9BZI1 471 aaPredicted RBP10.85□□□□□ -0.67
SKAP2-206ENST00000489977 TMEM134Q9H6X4 195 aa10.85□□□□□ -0.67
SKAP2-206ENST00000489977 NKX2-3Q8TAU0 364 aa10.83□□□□□ -0.68
SKAP2-206ENST00000489977 GPR37O15354 613 aa10.82□□□□□ -0.68
SKAP2-206ENST00000489977 COPS2P61201 443 aa10.82□□□□□ -0.68
SKAP2-206ENST00000489977 HIC1Q14526 733 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms