RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 HNRNPMP52272 730 aaKnown RBP eCLIP14.12□□□□□ -0.15
NOD1-208ENST00000489614 CYB5RLQ6IPT4 315 aa14.12□□□□□ -0.15
NOD1-208ENST00000489614 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
NOD1-208ENST00000489614 SIGLEC1Q9BZZ2 1709 aa14.12□□□□□ -0.15
NOD1-208ENST00000489614 ITGAEP38570 1179 aa14.12□□□□□ -0.15
NOD1-208ENST00000489614 KIF15Q9NS87 1388 aa14.11□□□□□ -0.15
NOD1-208ENST00000489614 NPM1P06748 294 aaKnown RBP eCLIP14.1□□□□□ -0.15
NOD1-208ENST00000489614 E9PCH4 1651 aa14.1□□□□□ -0.15
NOD1-208ENST00000489614 TET3O43151 1660 aa14.1□□□□□ -0.15
NOD1-208ENST00000489614 SCAPERQ9BY12 1400 aa14.1□□□□□ -0.15
NOD1-208ENST00000489614 FAM135AQ9P2D6 1515 aa14.09□□□□□ -0.15
NOD1-208ENST00000489614 TEX14Q8IWB6 1497 aa14.07□□□□□ -0.16
NOD1-208ENST00000489614 LMTK2Q8IWU2 1503 aa14.07□□□□□ -0.16
NOD1-208ENST00000489614 RRP7BPQ9NSQ0 103 aa14.07□□□□□ -0.16
NOD1-208ENST00000489614 ZC3H13Q5T200 1668 aaKnown RBP14.07□□□□□ -0.16
NOD1-208ENST00000489614 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
NOD1-208ENST00000489614 CHIC2Q9UKJ5 165 aa14.06□□□□□ -0.16
NOD1-208ENST00000489614 SALL2Q9Y467 1007 aaPredicted RBP14.06□□□□□ -0.16
NOD1-208ENST00000489614 CEP152O94986 1710 aa14.05□□□□□ -0.16
NOD1-208ENST00000489614 SPHKAPQ2M3C7 1700 aa14.05□□□□□ -0.16
NOD1-208ENST00000489614 BCANQ96GW7 911 aa14.04□□□□□ -0.16
NOD1-208ENST00000489614 ATP10AO60312 1499 aa14.04□□□□□ -0.16
NOD1-208ENST00000489614 ZNF316A6NFI3 1004 aaPredicted RBP14.04□□□□□ -0.16
NOD1-208ENST00000489614 ARHGEF40Q8TER5 1519 aa14.03□□□□□ -0.16
NOD1-208ENST00000489614 NEURL4Q96JN8 1562 aa14.03□□□□□ -0.16
NOD1-208ENST00000489614 ANKRD30BQ9BXX2 1392 aa14.03□□□□□ -0.16
NOD1-208ENST00000489614 RPRD2Q5VT52 1461 aaKnown RBP14.01□□□□□ -0.17
NOD1-208ENST00000489614 TSPY4P0CV99 314 aa14□□□□□ -0.17
NOD1-208ENST00000489614 TSPY10P0CW01 314 aa14□□□□□ -0.17
NOD1-208ENST00000489614 AGLP35573 1532 aa14□□□□□ -0.17
NOD1-208ENST00000489614 DHX29Q7Z478 1369 aaKnown RBP14□□□□□ -0.17
NOD1-208ENST00000489614 A2MP01023 1474 aa14□□□□□ -0.17
NOD1-208ENST00000489614 CAMSAP1Q5T5Y3 1602 aa14□□□□□ -0.17
NOD1-208ENST00000489614 IFT172Q9UG01 1749 aa13.99□□□□□ -0.17
NOD1-208ENST00000489614 EFCAB6Q5THR3 1501 aa13.99□□□□□ -0.17
NOD1-208ENST00000489614 COL17A1Q9UMD9 1497 aaPredicted RBP13.99□□□□□ -0.17
NOD1-208ENST00000489614 AFAP1Q8N556 730 aa13.98□□□□□ -0.17
NOD1-208ENST00000489614 MPHOSPH9Q99550 1183 aa13.98□□□□□ -0.17
NOD1-208ENST00000489614 PLA2R1Q13018 1463 aa13.97□□□□□ -0.17
NOD1-208ENST00000489614 SPAG9O60271 1321 aaKnown RBP13.97□□□□□ -0.17
NOD1-208ENST00000489614 TRPM2O94759 1503 aa13.97□□□□□ -0.17
NOD1-208ENST00000489614 RBM19Q9Y4C8 960 aaKnown RBP13.96□□□□□ -0.17
NOD1-208ENST00000489614 PIK3C2BO00750 1634 aa13.96□□□□□ -0.17
NOD1-208ENST00000489614 DNAJC5Q9H3Z4 198 aa13.95□□□□□ -0.18
NOD1-208ENST00000489614 TIMELESSQ9UNS1 1208 aa13.95□□□□□ -0.18
NOD1-208ENST00000489614 PTPRTO14522 1441 aa13.95□□□□□ -0.18
NOD1-208ENST00000489614 ABCC3O15438 1527 aa13.94□□□□□ -0.18
NOD1-208ENST00000489614 CLTCL1P53675 1640 aa13.93□□□□□ -0.18
NOD1-208ENST00000489614 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
NOD1-208ENST00000489614 YEATS2Q9ULM3 1422 aa13.93□□□□□ -0.18
NOD1-208ENST00000489614 MSH5O43196 834 aa13.92□□□□□ -0.18
NOD1-208ENST00000489614 UBE2Q2Q8WVN8 375 aa13.92□□□□□ -0.18
NOD1-208ENST00000489614 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.92□□□□□ -0.18
NOD1-208ENST00000489614 DEKP35659 375 aaKnown RBP13.91□□□□□ -0.18
NOD1-208ENST00000489614 POLR1AO95602 1720 aaPredicted RBP13.91□□□□□ -0.18
NOD1-208ENST00000489614 MROH2AA6NES4 1674 aa13.91□□□□□ -0.18
NOD1-208ENST00000489614 AEBP2Q6ZN18 517 aaPredicted RBP13.91□□□□□ -0.18
NOD1-208ENST00000489614 NUP155O75694 1391 aa13.9□□□□□ -0.19
NOD1-208ENST00000489614 PREX1Q8TCU6 1659 aa13.89□□□□□ -0.19
NOD1-208ENST00000489614 EIF5BO60841 1220 aaKnown RBP13.89□□□□□ -0.19
NOD1-208ENST00000489614 KIF1BO60333 1816 aa13.89□□□□□ -0.19
NOD1-208ENST00000489614 LAMC1P11047 1609 aa13.88□□□□□ -0.19
NOD1-208ENST00000489614 SYNMO15061 1565 aa13.87□□□□□ -0.19
NOD1-208ENST00000489614 TRPM1Q7Z4N2 1603 aa13.87□□□□□ -0.19
NOD1-208ENST00000489614 SIN3AQ96ST3 1273 aa13.87□□□□□ -0.19
NOD1-208ENST00000489614 ARHGAP31Q2M1Z3 1444 aa13.86□□□□□ -0.19
NOD1-208ENST00000489614 UHRF1BP1Q6BDS2 1440 aa13.86□□□□□ -0.19
NOD1-208ENST00000489614 CLTCQ00610 1675 aaKnown RBP13.86□□□□□ -0.19
NOD1-208ENST00000489614 PPLO60437 1756 aa13.85□□□□□ -0.19
NOD1-208ENST00000489614 KIAA1210Q9ULL0 1709 aa13.85□□□□□ -0.19
NOD1-208ENST00000489614 RAPGEF3O95398 923 aa13.84□□□□□ -0.19
NOD1-208ENST00000489614 SPATA31E1Q6ZUB1 1445 aa13.83□□□□□ -0.19
NOD1-208ENST00000489614 ADGRB3O60242 1522 aa13.83□□□□□ -0.2
NOD1-208ENST00000489614 MADDQ8WXG6 1647 aa13.83□□□□□ -0.2
NOD1-208ENST00000489614 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
NOD1-208ENST00000489614 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
NOD1-208ENST00000489614 TRIM52Q96A61 297 aa13.82□□□□□ -0.2
NOD1-208ENST00000489614 KDM5AP29375 1690 aaKnown RBP13.82□□□□□ -0.2
NOD1-208ENST00000489614 MYO5BQ9ULV0 1848 aa13.82□□□□□ -0.2
NOD1-208ENST00000489614 SLC24A1O60721 1099 aa13.82□□□□□ -0.2
NOD1-208ENST00000489614 NOS1P29475 1434 aa13.81□□□□□ -0.2
NOD1-208ENST00000489614 PKD2Q13563 968 aa13.81□□□□□ -0.2
NOD1-208ENST00000489614 PPP1R15AO75807 674 aaPredicted RBP13.8□□□□□ -0.2
NOD1-208ENST00000489614 FOXD1Q16676 465 aa13.8□□□□□ -0.2
NOD1-208ENST00000489614 SPATA31D1Q6ZQQ2 1576 aa13.8□□□□□ -0.2
NOD1-208ENST00000489614 NPATQ14207 1427 aa13.8□□□□□ -0.2
NOD1-208ENST00000489614 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
NOD1-208ENST00000489614 TMEM131LA2VDJ0 1609 aa13.77□□□□□ -0.2
NOD1-208ENST00000489614 NRXN1Q9ULB1 1477 aa13.77□□□□□ -0.21
NOD1-208ENST00000489614 FKBP8Q14318 412 aa13.77□□□□□ -0.21
NOD1-208ENST00000489614 UGGT1Q9NYU2 1555 aa13.77□□□□□ -0.21
NOD1-208ENST00000489614 IQGAP1P46940 1657 aa13.77□□□□□ -0.21
NOD1-208ENST00000489614 CNTLNQ9NXG0 1405 aa13.76□□□□□ -0.21
NOD1-208ENST00000489614 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
NOD1-208ENST00000489614 FER1L4A9Z1Z3 1794 aa13.75□□□□□ -0.21
NOD1-208ENST00000489614 KANK1Q14678 1352 aa13.75□□□□□ -0.21
NOD1-208ENST00000489614 MYOM2P54296 1465 aa13.74□□□□□ -0.21
NOD1-208ENST00000489614 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
NOD1-208ENST00000489614 CFAP65Q6ZU64 1925 aaKnown RBP13.74□□□□□ -0.21
NOD1-208ENST00000489614 C3P01024 1663 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms