RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 PROX2Q3B8N5 592 aa13.96□□□□□ -0.17
SMC6-209ENST00000489535 ANKK1Q8NFD2 765 aa13.96□□□□□ -0.17
SMC6-209ENST00000489535 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.18
SMC6-209ENST00000489535 PDE4AP27815 886 aa13.95□□□□□ -0.18
SMC6-209ENST00000489535 BCAMP50895 628 aa13.93□□□□□ -0.18
SMC6-209ENST00000489535 RYDENQ9NUL5 291 aaKnown RBP13.93□□□□□ -0.18
SMC6-209ENST00000489535 COL9A1P20849 921 aa13.92□□□□□ -0.18
SMC6-209ENST00000489535 PCDHGA10Q9Y5H3 936 aa13.92□□□□□ -0.18
SMC6-209ENST00000489535 Q6ZNB5 142 aa13.91□□□□□ -0.18
SMC6-209ENST00000489535 SOWAHBA6NEL2 793 aa13.89□□□□□ -0.19
SMC6-209ENST00000489535 MAP3K9P80192 1104 aa13.88□□□□□ -0.19
SMC6-209ENST00000489535 LAPTM4BQ86VI4 370 aa13.88□□□□□ -0.19
SMC6-209ENST00000489535 DDX27Q96GQ7 796 aaKnown RBP13.86□□□□□ -0.19
SMC6-209ENST00000489535 LARP6Q9BRS8 491 aaKnown RBP13.86□□□□□ -0.19
SMC6-209ENST00000489535 NYAP1Q6ZVC0 841 aa13.85□□□□□ -0.19
SMC6-209ENST00000489535 EMILIN3Q9NT22 766 aa13.85□□□□□ -0.19
SMC6-209ENST00000489535 MFSD10Q14728 455 aa13.84□□□□□ -0.19
SMC6-209ENST00000489535 ZFRQ96KR1 1074 aaKnown RBP13.84□□□□□ -0.19
SMC6-209ENST00000489535 WBP1LQ9NX94 342 aa13.84□□□□□ -0.19
SMC6-209ENST00000489535 KCNC4Q03721 635 aa13.82□□□□□ -0.2
SMC6-209ENST00000489535 KIAA1468Q9P260 1216 aa13.82□□□□□ -0.2
SMC6-209ENST00000489535 TYW1BQ6NUM6 668 aa13.81□□□□□ -0.2
SMC6-209ENST00000489535 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
SMC6-209ENST00000489535 LCE2BO14633 110 aa13.79□□□□□ -0.2
SMC6-209ENST00000489535 PHF14O94880 888 aa13.79□□□□□ -0.2
SMC6-209ENST00000489535 ONECUT3O60422 494 aaPredicted RBP13.78□□□□□ -0.2
SMC6-209ENST00000489535 SEPT9Q9UHD8 586 aaPredicted RBP13.77□□□□□ -0.21
SMC6-209ENST00000489535 GTPBP6O43824 516 aaPredicted RBP13.76□□□□□ -0.21
SMC6-209ENST00000489535 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
SMC6-209ENST00000489535 SUPT5HO00267 1087 aaKnown RBP13.74□□□□□ -0.21
SMC6-209ENST00000489535 LAPTM4AQ15012 233 aa13.73□□□□□ -0.21
SMC6-209ENST00000489535 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
SMC6-209ENST00000489535 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.21
SMC6-209ENST00000489535 C6orf132Q5T0Z8 1188 aa13.71□□□□□ -0.21
SMC6-209ENST00000489535 TRIM6-TRIM34B2RNG4 842 aa13.7□□□□□ -0.22
SMC6-209ENST00000489535 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
SMC6-209ENST00000489535 TSR3Q9UJK0 312 aaKnown RBP13.7□□□□□ -0.22
SMC6-209ENST00000489535 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
SMC6-209ENST00000489535 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.68□□□□□ -0.22
SMC6-209ENST00000489535 HPS5Q9UPZ3 1129 aa13.68□□□□□ -0.22
SMC6-209ENST00000489535 WIZO95785 1651 aa13.67□□□□□ -0.22
SMC6-209ENST00000489535 EPAS1Q99814 870 aa13.67□□□□□ -0.22
SMC6-209ENST00000489535 GFRA3O60609 400 aa13.66□□□□□ -0.22
SMC6-209ENST00000489535 TRAF7Q6Q0C0 670 aa13.66□□□□□ -0.22
SMC6-209ENST00000489535 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
SMC6-209ENST00000489535 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
SMC6-209ENST00000489535 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
SMC6-209ENST00000489535 CAMK2BQ13554 666 aa13.59□□□□□ -0.23
SMC6-209ENST00000489535 RBM33Q96EV2 1170 aaKnown RBP13.58□□□□□ -0.24
SMC6-209ENST00000489535 TJAP1Q5JTD0 557 aa13.57□□□□□ -0.24
SMC6-209ENST00000489535 DPYSL4O14531 572 aa13.56□□□□□ -0.24
SMC6-209ENST00000489535 PRKD2Q9BZL6 878 aa13.56□□□□□ -0.24
SMC6-209ENST00000489535 TSKSQ9UJT2 592 aa13.56□□□□□ -0.24
SMC6-209ENST00000489535 NRG2O14511 850 aaPredicted RBP13.55□□□□□ -0.24
SMC6-209ENST00000489535 PPP4CP60510 307 aa13.53□□□□□ -0.24
SMC6-209ENST00000489535 EIF4G1Q04637 1599 aaKnown RBP13.53□□□□□ -0.24
SMC6-209ENST00000489535 DDX12PQ92771 950 aa13.52□□□□□ -0.25
SMC6-209ENST00000489535 PEG3Q9GZU2 1588 aa13.51□□□□□ -0.25
SMC6-209ENST00000489535 PACS2Q86VP3 889 aa13.51□□□□□ -0.25
SMC6-209ENST00000489535 EN1Q05925 392 aaPredicted RBP13.49□□□□□ -0.25
SMC6-209ENST00000489535 TSR1Q2NL82 804 aaKnown RBP13.49□□□□□ -0.25
SMC6-209ENST00000489535 PPP1R18Q6NYC8 613 aa13.49□□□□□ -0.25
SMC6-209ENST00000489535 V9GY48 417 aaPredicted RBP13.49□□□□□ -0.25
SMC6-209ENST00000489535 MTRQ99707 1265 aa13.48□□□□□ -0.25
SMC6-209ENST00000489535 SAMD7Q7Z3H4 446 aa13.47□□□□□ -0.25
SMC6-209ENST00000489535 TOP2AP11388 1531 aaKnown RBP13.47□□□□□ -0.25
SMC6-209ENST00000489535 IL21Q9HBE4 155 aa13.46□□□□□ -0.25
SMC6-209ENST00000489535 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
SMC6-209ENST00000489535 SMAPO00193 183 aa13.44□□□□□ -0.26
SMC6-209ENST00000489535 NBR1Q14596 966 aa13.44□□□□□ -0.26
SMC6-209ENST00000489535 MAP3K7O43318 606 aa13.43□□□□□ -0.26
SMC6-209ENST00000489535 FAM198AQ9UFP1 575 aa13.43□□□□□ -0.26
SMC6-209ENST00000489535 C3orf80F5H4A9 247 aa13.41□□□□□ -0.26
SMC6-209ENST00000489535 ZNF516Q92618 1163 aa13.41□□□□□ -0.26
SMC6-209ENST00000489535 CDCA7LQ96GN5 454 aa13.41□□□□□ -0.26
SMC6-209ENST00000489535 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.41□□□□□ -0.26
SMC6-209ENST00000489535 ZNF787Q6DD87 383 aa13.39□□□□□ -0.27
SMC6-209ENST00000489535 ATAD2BQ9ULI0 1458 aa13.39□□□□□ -0.27
SMC6-209ENST00000489535 PRSS12P56730 875 aa13.38□□□□□ -0.27
SMC6-209ENST00000489535 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
SMC6-209ENST00000489535 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
SMC6-209ENST00000489535 PDIA6Q15084 440 aa13.36□□□□□ -0.27
SMC6-209ENST00000489535 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
SMC6-209ENST00000489535 TATDN2Q93075 761 aa13.35□□□□□ -0.27
SMC6-209ENST00000489535 APLP1P51693 650 aa13.34□□□□□ -0.27
SMC6-209ENST00000489535 NKX2-3Q8TAU0 364 aa13.34□□□□□ -0.27
SMC6-209ENST00000489535 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
SMC6-209ENST00000489535 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
SMC6-209ENST00000489535 ZNF775Q96BV0 537 aaPredicted RBP13.33□□□□□ -0.28
SMC6-209ENST00000489535 NBPF26B4DH59 902 aa13.32□□□□□ -0.28
SMC6-209ENST00000489535 PNMA3Q9UL41 463 aa13.32□□□□□ -0.28
SMC6-209ENST00000489535 CERKQ8TCT0 537 aa13.31□□□□□ -0.28
SMC6-209ENST00000489535 SPDYE16A6NNV3 312 aaPredicted RBP13.27□□□□□ -0.29
SMC6-209ENST00000489535 RNF40O75150 1001 aa13.27□□□□□ -0.29
SMC6-209ENST00000489535 CCDC88BA6NC98 1476 aa13.27□□□□□ -0.29
SMC6-209ENST00000489535 NCAPD3P42695 1498 aa13.27□□□□□ -0.29
SMC6-209ENST00000489535 NUDT18Q6ZVK8 323 aa13.25□□□□□ -0.29
SMC6-209ENST00000489535 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
SMC6-209ENST00000489535 GGCXP38435 758 aa13.23□□□□□ -0.29
SMC6-209ENST00000489535 TRIM67Q6ZTA4 783 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms