RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 MLH3Q9UHC1 1453 aa15.46■□□□□ 0.07
ITSN1-231ENST00000489261 RIMS1Q86UR5 1692 aaKnown RBP15.46■□□□□ 0.07
ITSN1-231ENST00000489261 SYCP2Q9BX26 1530 aa15.46■□□□□ 0.07
ITSN1-231ENST00000489261 TRAPPC8Q9Y2L5 1435 aa15.45■□□□□ 0.06
ITSN1-231ENST00000489261 FER1L4A9Z1Z3 1794 aa15.45■□□□□ 0.06
ITSN1-231ENST00000489261 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
ITSN1-231ENST00000489261 PTPRMP28827 1452 aa15.45■□□□□ 0.06
ITSN1-231ENST00000489261 AFAP1Q8N556 730 aa15.43■□□□□ 0.06
ITSN1-231ENST00000489261 PZPP20742 1482 aa15.43■□□□□ 0.06
ITSN1-231ENST00000489261 KDM5DQ9BY66 1539 aa15.43■□□□□ 0.06
ITSN1-231ENST00000489261 ARID4BQ4LE39 1312 aaPredicted RBP15.42■□□□□ 0.06
ITSN1-231ENST00000489261 RPRD2Q5VT52 1461 aaKnown RBP15.41■□□□□ 0.06
ITSN1-231ENST00000489261 INO80Q9ULG1 1556 aaPredicted RBP15.41■□□□□ 0.06
ITSN1-231ENST00000489261 NUP155O75694 1391 aa15.4■□□□□ 0.06
ITSN1-231ENST00000489261 RTEL1-TNFRSF6BF6WH68 1400 aa15.39■□□□□ 0.05
ITSN1-231ENST00000489261 AGLP35573 1532 aa15.38■□□□□ 0.05
ITSN1-231ENST00000489261 PKD2Q13563 968 aa15.38■□□□□ 0.05
ITSN1-231ENST00000489261 PLXNC1O60486 1568 aa15.37■□□□□ 0.05
ITSN1-231ENST00000489261 MIER1Q8N108 512 aa15.37■□□□□ 0.05
ITSN1-231ENST00000489261 ATP7AQ04656 1500 aa15.37■□□□□ 0.05
ITSN1-231ENST00000489261 L3MBTL2Q969R5 705 aa15.36■□□□□ 0.05
ITSN1-231ENST00000489261 DUOX2Q9NRD8 1548 aa15.35■□□□□ 0.05
ITSN1-231ENST00000489261 FOXD1Q16676 465 aa15.35■□□□□ 0.05
ITSN1-231ENST00000489261 CENPBP07199 599 aaPredicted RBP15.34■□□□□ 0.05
ITSN1-231ENST00000489261 ERBINQ96RT1 1412 aa15.34■□□□□ 0.05
ITSN1-231ENST00000489261 MYT1LQ9UL68 1186 aa15.31■□□□□ 0.04
ITSN1-231ENST00000489261 SPAG9O60271 1321 aaKnown RBP15.31■□□□□ 0.04
ITSN1-231ENST00000489261 C3P01024 1663 aa15.29■□□□□ 0.04
ITSN1-231ENST00000489261 UNC13BO14795 1591 aa15.29■□□□□ 0.04
ITSN1-231ENST00000489261 LMTK3Q96Q04 1460 aa15.29■□□□□ 0.04
ITSN1-231ENST00000489261 EIF4G2P78344 907 aaKnown RBP eCLIP15.29■□□□□ 0.04
ITSN1-231ENST00000489261 MLECQ14165 292 aa15.29■□□□□ 0.04
ITSN1-231ENST00000489261 MROH2AA6NES4 1674 aa15.28■□□□□ 0.04
ITSN1-231ENST00000489261 A2MP01023 1474 aa15.27■□□□□ 0.04
ITSN1-231ENST00000489261 PREX1Q8TCU6 1659 aa15.27■□□□□ 0.03
ITSN1-231ENST00000489261 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.03
ITSN1-231ENST00000489261 SETD1BQ9UPS6 1966 aaKnown RBP15.25■□□□□ 0.03
ITSN1-231ENST00000489261 HSPA5P11021 654 aaKnown RBP15.23■□□□□ 0.03
ITSN1-231ENST00000489261 DDX10Q13206 875 aaKnown RBP15.23■□□□□ 0.03
ITSN1-231ENST00000489261 IQGAP3Q86VI3 1631 aa15.23■□□□□ 0.03
ITSN1-231ENST00000489261 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
ITSN1-231ENST00000489261 NBPF8Q3BBV2 869 aa15.22■□□□□ 0.03
ITSN1-231ENST00000489261 CNTLNQ9NXG0 1405 aa15.22■□□□□ 0.03
ITSN1-231ENST00000489261 CLTCQ00610 1675 aaKnown RBP15.22■□□□□ 0.03
ITSN1-231ENST00000489261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.2■□□□□ 0.02
ITSN1-231ENST00000489261 DHX29Q7Z478 1369 aaKnown RBP15.2■□□□□ 0.02
ITSN1-231ENST00000489261 KANK1Q14678 1352 aa15.19■□□□□ 0.02
ITSN1-231ENST00000489261 CCDC144AA2RUR9 1427 aa15.18■□□□□ 0.02
ITSN1-231ENST00000489261 STAC3Q96MF2 364 aa15.18■□□□□ 0.02
ITSN1-231ENST00000489261 ANP32CO43423 234 aa15.17■□□□□ 0.02
ITSN1-231ENST00000489261 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
ITSN1-231ENST00000489261 CCER2I3L3R5 266 aa15.16■□□□□ 0.02
ITSN1-231ENST00000489261 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
ITSN1-231ENST00000489261 HIRIP3Q9BW71 556 aaPredicted RBP15.16■□□□□ 0.02
ITSN1-231ENST00000489261 EIF2AK4Q9P2K8 1649 aaKnown RBP15.16■□□□□ 0.02
ITSN1-231ENST00000489261 RNF17Q9BXT8 1623 aaKnown RBP15.15■□□□□ 0.02
ITSN1-231ENST00000489261 SPATA31E1Q6ZUB1 1445 aa15.15■□□□□ 0.02
ITSN1-231ENST00000489261 NPATQ14207 1427 aa15.14■□□□□ 0.01
ITSN1-231ENST00000489261 ESF1Q9H501 851 aaKnown RBP15.13■□□□□ 0.01
ITSN1-231ENST00000489261 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
ITSN1-231ENST00000489261 STRCQ7RTU9 1775 aa15.13■□□□□ 0.01
ITSN1-231ENST00000489261 PLA2R1Q13018 1463 aa15.13■□□□□ 0.01
ITSN1-231ENST00000489261 ZNF142P52746 1687 aaPredicted RBP15.12■□□□□ 0.01
ITSN1-231ENST00000489261 ZMYM3Q14202 1370 aa15.12■□□□□ 0.01
ITSN1-231ENST00000489261 DEPDC5O75140 1603 aa15.12■□□□□ 0.01
ITSN1-231ENST00000489261 RALGAPBQ86X10 1494 aa15.12■□□□□ 0.01
ITSN1-231ENST00000489261 MYO3AQ8NEV4 1616 aa15.11■□□□□ 0.01
ITSN1-231ENST00000489261 DCAF11Q8TEB1 546 aa15.11■□□□□ 0.01
ITSN1-231ENST00000489261 ZC3H13Q5T200 1668 aaKnown RBP15.11■□□□□ 0.01
ITSN1-231ENST00000489261 PTPRTO14522 1441 aa15.1■□□□□ 0.01
ITSN1-231ENST00000489261 KIF3BO15066 747 aa15.1■□□□□ 0.01
ITSN1-231ENST00000489261 HSPA2P54652 639 aa15.1■□□□□ 0.01
ITSN1-231ENST00000489261 GGT6Q6P531 493 aa15.1■□□□□ 0.01
ITSN1-231ENST00000489261 WASHC2AQ641Q2 1341 aa15.1■□□□□ 0.01
ITSN1-231ENST00000489261 VWDEQ8N2E2 1590 aa15.1■□□□□ 0.01
ITSN1-231ENST00000489261 MROH1Q8NDA8 1641 aa15.1■□□□□ 0.01
ITSN1-231ENST00000489261 CCDC7Q96M83 1385 aa15.09■□□□□ 0.01
ITSN1-231ENST00000489261 CARD11Q9BXL7 1154 aa15.07■□□□□ 0
ITSN1-231ENST00000489261 KDM2AQ9Y2K7 1162 aa15.07■□□□□ 0
ITSN1-231ENST00000489261 USP47Q96K76 1375 aa15.07■□□□□ 0
ITSN1-231ENST00000489261 TET3O43151 1660 aa15.06■□□□□ 0
ITSN1-231ENST00000489261 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
ITSN1-231ENST00000489261 YTHDC1Q96MU7 727 aaKnown RBP15.06■□□□□ 0
ITSN1-231ENST00000489261 PRDM15P57071 1507 aaPredicted RBP15.06■□□□□ 0
ITSN1-231ENST00000489261 LMTK2Q8IWU2 1503 aa15.06■□□□□ 0
ITSN1-231ENST00000489261 CEP152O94986 1710 aa15.06■□□□□ 0
ITSN1-231ENST00000489261 PRAG1Q86YV5 1406 aa15.05■□□□□ -0
ITSN1-231ENST00000489261 NEURL4Q96JN8 1562 aa15.04■□□□□ -0
ITSN1-231ENST00000489261 CEP170BQ9Y4F5 1589 aaPredicted RBP15.04■□□□□ -0
ITSN1-231ENST00000489261 ABCC3O15438 1527 aa15.04■□□□□ -0
ITSN1-231ENST00000489261 TRPM2O94759 1503 aa15.04■□□□□ -0
ITSN1-231ENST00000489261 ROCK2O75116 1388 aaKnown RBP15.03■□□□□ -0
ITSN1-231ENST00000489261 GPRASP1Q5JY77 1395 aa15.03■□□□□ -0
ITSN1-231ENST00000489261 CAMSAP1Q5T5Y3 1602 aa15.03■□□□□ -0
ITSN1-231ENST00000489261 RGL3Q3MIN7 710 aa15.02■□□□□ -0
ITSN1-231ENST00000489261 E9PCH4 1651 aa15.02□□□□□ -0.01
ITSN1-231ENST00000489261 KIF7Q2M1P5 1343 aa15.01□□□□□ -0.01
ITSN1-231ENST00000489261 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
ITSN1-231ENST00000489261 POLR1AO95602 1720 aaPredicted RBP15□□□□□ -0.01
ITSN1-231ENST00000489261 LAMC1P11047 1609 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms