RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 ABCA6Q8N139 1617 aa18.82■□□□□ 0.6
COL4A5-206ENST00000489230 KIF3BO15066 747 aa18.81■□□□□ 0.6
COL4A5-206ENST00000489230 ADGBQ8N7X0 1667 aa18.81■□□□□ 0.6
COL4A5-206ENST00000489230 NCOA1Q15788 1441 aa18.81■□□□□ 0.6
COL4A5-206ENST00000489230 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
COL4A5-206ENST00000489230 KIF15Q9NS87 1388 aa18.8■□□□□ 0.6
COL4A5-206ENST00000489230 GGT6Q6P531 493 aa18.79■□□□□ 0.6
COL4A5-206ENST00000489230 PTPRTO14522 1441 aa18.78■□□□□ 0.6
COL4A5-206ENST00000489230 C3P01024 1663 aa18.78■□□□□ 0.6
COL4A5-206ENST00000489230 DUOX2Q9NRD8 1548 aa18.78■□□□□ 0.6
COL4A5-206ENST00000489230 ADGRL2O95490 1459 aa18.77■□□□□ 0.59
COL4A5-206ENST00000489230 PLXNC1O60486 1568 aa18.76■□□□□ 0.59
COL4A5-206ENST00000489230 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
COL4A5-206ENST00000489230 CNTLNQ9NXG0 1405 aa18.74■□□□□ 0.59
COL4A5-206ENST00000489230 CROCC2H7BZ55 1655 aa18.74■□□□□ 0.59
COL4A5-206ENST00000489230 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
COL4A5-206ENST00000489230 ILDR2Q71H61 639 aa18.72■□□□□ 0.59
COL4A5-206ENST00000489230 WASHC2CQ9Y4E1 1318 aa18.72■□□□□ 0.59
COL4A5-206ENST00000489230 SOCS7O14512 581 aa18.7■□□□□ 0.58
COL4A5-206ENST00000489230 ANKRD50Q9ULJ7 1429 aa18.7■□□□□ 0.58
COL4A5-206ENST00000489230 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
COL4A5-206ENST00000489230 KANK1Q14678 1352 aa18.68■□□□□ 0.58
COL4A5-206ENST00000489230 SPATA31D1Q6ZQQ2 1576 aa18.67■□□□□ 0.58
COL4A5-206ENST00000489230 LTBP4Q8N2S1 1624 aa18.67■□□□□ 0.58
COL4A5-206ENST00000489230 IQSEC2Q5JU85 1478 aa18.66■□□□□ 0.58
COL4A5-206ENST00000489230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.58
COL4A5-206ENST00000489230 EIF2AK4Q9P2K8 1649 aaKnown RBP18.66■□□□□ 0.58
COL4A5-206ENST00000489230 NPATQ14207 1427 aa18.66■□□□□ 0.58
COL4A5-206ENST00000489230 ZMYM3Q14202 1370 aa18.65■□□□□ 0.58
COL4A5-206ENST00000489230 CAMSAP1Q5T5Y3 1602 aa18.64■□□□□ 0.57
COL4A5-206ENST00000489230 FAM135AQ9P2D6 1515 aa18.64■□□□□ 0.57
COL4A5-206ENST00000489230 MROH2AA6NES4 1674 aa18.63■□□□□ 0.57
COL4A5-206ENST00000489230 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
COL4A5-206ENST00000489230 NCKAP5LQ9HCH0 1330 aa18.6■□□□□ 0.57
COL4A5-206ENST00000489230 RNF17Q9BXT8 1623 aaKnown RBP18.59■□□□□ 0.57
COL4A5-206ENST00000489230 NAIPQ13075 1403 aa18.58■□□□□ 0.57
COL4A5-206ENST00000489230 PKD2Q13563 968 aa18.57■□□□□ 0.56
COL4A5-206ENST00000489230 KDM5DQ9BY66 1539 aa18.57■□□□□ 0.56
COL4A5-206ENST00000489230 CLTCQ00610 1675 aaKnown RBP18.57■□□□□ 0.56
COL4A5-206ENST00000489230 ZNF335Q9H4Z2 1342 aaPredicted RBP18.56■□□□□ 0.56
COL4A5-206ENST00000489230 UBAP1LF5GYI3 381 aa18.56■□□□□ 0.56
COL4A5-206ENST00000489230 TRIM26Q12899 539 aaPredicted RBP18.55■□□□□ 0.56
COL4A5-206ENST00000489230 MYO3AQ8NEV4 1616 aa18.55■□□□□ 0.56
COL4A5-206ENST00000489230 NUP155O75694 1391 aa18.55■□□□□ 0.56
COL4A5-206ENST00000489230 PLA2R1Q13018 1463 aa18.54■□□□□ 0.56
COL4A5-206ENST00000489230 HRCP23327 699 aa18.54■□□□□ 0.56
COL4A5-206ENST00000489230 TRIM52Q96A61 297 aa18.53■□□□□ 0.56
COL4A5-206ENST00000489230 SETD5Q9C0A6 1442 aa18.53■□□□□ 0.56
COL4A5-206ENST00000489230 CEP170BQ9Y4F5 1589 aaPredicted RBP18.53■□□□□ 0.56
COL4A5-206ENST00000489230 ZNF142P52746 1687 aaPredicted RBP18.53■□□□□ 0.56
COL4A5-206ENST00000489230 PRDM15P57071 1507 aaPredicted RBP18.53■□□□□ 0.56
COL4A5-206ENST00000489230 DEPDC5O75140 1603 aa18.52■□□□□ 0.55
COL4A5-206ENST00000489230 ARHGAP31Q2M1Z3 1444 aa18.51■□□□□ 0.55
COL4A5-206ENST00000489230 ABCC3O15438 1527 aa18.51■□□□□ 0.55
COL4A5-206ENST00000489230 ZC3H13Q5T200 1668 aaKnown RBP18.5■□□□□ 0.55
COL4A5-206ENST00000489230 LMTK2Q8IWU2 1503 aa18.49■□□□□ 0.55
COL4A5-206ENST00000489230 MROH1Q8NDA8 1641 aa18.49■□□□□ 0.55
COL4A5-206ENST00000489230 FBXO31Q5XUX0 539 aaPredicted RBP18.49■□□□□ 0.55
COL4A5-206ENST00000489230 PZPP20742 1482 aa18.49■□□□□ 0.55
COL4A5-206ENST00000489230 VWDEQ8N2E2 1590 aa18.47■□□□□ 0.55
COL4A5-206ENST00000489230 GCC2Q8IWJ2 1684 aa18.46■□□□□ 0.55
COL4A5-206ENST00000489230 UNC13BO14795 1591 aa18.46■□□□□ 0.55
COL4A5-206ENST00000489230 A2ML1A8K2U0 1454 aa18.45■□□□□ 0.54
COL4A5-206ENST00000489230 TNRQ92752 1358 aa18.44■□□□□ 0.54
COL4A5-206ENST00000489230 SLC4A1APQ9BWU0 796 aaKnown RBP18.44■□□□□ 0.54
COL4A5-206ENST00000489230 RPRD2Q5VT52 1461 aaKnown RBP18.44■□□□□ 0.54
COL4A5-206ENST00000489230 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
COL4A5-206ENST00000489230 SLC52A1Q9NWF4 448 aa18.43■□□□□ 0.54
COL4A5-206ENST00000489230 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
COL4A5-206ENST00000489230 MPHOSPH9Q99550 1183 aa18.4■□□□□ 0.54
COL4A5-206ENST00000489230 IQGAP3Q86VI3 1631 aa18.4■□□□□ 0.54
COL4A5-206ENST00000489230 TOM1O60784 492 aa18.39■□□□□ 0.53
COL4A5-206ENST00000489230 PIP4K2BP78356 416 aa18.39■□□□□ 0.53
COL4A5-206ENST00000489230 THEMISQ8N1K5 641 aaPredicted RBP18.39■□□□□ 0.53
COL4A5-206ENST00000489230 CEP152O94986 1710 aa18.39■□□□□ 0.53
COL4A5-206ENST00000489230 TET3O43151 1660 aa18.38■□□□□ 0.53
COL4A5-206ENST00000489230 ERVK-7P63135 1459 aa18.38■□□□□ 0.53
COL4A5-206ENST00000489230 NLRP1Q9C000 1473 aa18.38■□□□□ 0.53
COL4A5-206ENST00000489230 EFCAB6Q5THR3 1501 aa18.38■□□□□ 0.53
COL4A5-206ENST00000489230 CPS1P31327 1500 aa18.37■□□□□ 0.53
COL4A5-206ENST00000489230 POLR1AO95602 1720 aaPredicted RBP18.36■□□□□ 0.53
COL4A5-206ENST00000489230 STAG3Q9UJ98 1225 aa18.36■□□□□ 0.53
COL4A5-206ENST00000489230 NOS1P29475 1434 aa18.35■□□□□ 0.53
COL4A5-206ENST00000489230 HSPA1LP34931 641 aa18.35■□□□□ 0.53
COL4A5-206ENST00000489230 IDI1Q13907 227 aa18.35■□□□□ 0.53
COL4A5-206ENST00000489230 ANKLE2Q86XL3 938 aa18.35■□□□□ 0.53
COL4A5-206ENST00000489230 NEURL4Q96JN8 1562 aa18.33■□□□□ 0.52
COL4A5-206ENST00000489230 HDGFP51858 240 aaKnown RBP18.31■□□□□ 0.52
COL4A5-206ENST00000489230 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
COL4A5-206ENST00000489230 CFAP65Q6ZU64 1925 aaKnown RBP18.3■□□□□ 0.52
COL4A5-206ENST00000489230 UGGT1Q9NYU2 1555 aa18.29■□□□□ 0.52
COL4A5-206ENST00000489230 E9PCH4 1651 aa18.28■□□□□ 0.52
COL4A5-206ENST00000489230 NPHP4O75161 1426 aaPredicted RBP18.27■□□□□ 0.52
COL4A5-206ENST00000489230 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
COL4A5-206ENST00000489230 EID1Q9Y6B2 187 aa18.26■□□□□ 0.51
COL4A5-206ENST00000489230 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
COL4A5-206ENST00000489230 FOXD1Q16676 465 aa18.24■□□□□ 0.51
COL4A5-206ENST00000489230 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
COL4A5-206ENST00000489230 MED14O60244 1454 aa18.24■□□□□ 0.51
COL4A5-206ENST00000489230 TXNDC2Q86VQ3 553 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms