RNA–Protein interactions for RNA: ENST00000489194.5

NVL-220, Transcript of nuclear VCP-like, humanhuman

TSL 3

Gene NVL, Length 692 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-220ENST00000489194 IQGAP2Q13576 1575 aa12.78□□□□□ -0.36
NVL-220ENST00000489194 KHSRPQ92945 711 aaKnown RBP eCLIP12.78□□□□□ -0.367e-9■□□□□ 9.1
NVL-220ENST00000489194 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
NVL-220ENST00000489194 IFNLR1Q8IU57 520 aaPredicted RBP12.77□□□□□ -0.37
NVL-220ENST00000489194 SAMD9Q5K651 1589 aa12.77□□□□□ -0.37
NVL-220ENST00000489194 PPARGC1BQ86YN6 1023 aaKnown RBP12.76□□□□□ -0.37
NVL-220ENST00000489194 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
NVL-220ENST00000489194 GRIN2AQ12879 1464 aa12.75□□□□□ -0.37
NVL-220ENST00000489194 MS4A4AQ96JQ5 239 aa12.75□□□□□ -0.37
NVL-220ENST00000489194 KIAA0586Q9BVV6 1533 aa12.74□□□□□ -0.37
NVL-220ENST00000489194 FYCO1Q9BQS8 1478 aa12.74□□□□□ -0.37
NVL-220ENST00000489194 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
NVL-220ENST00000489194 PLA2G2EQ9NZK7 142 aa12.74□□□□□ -0.37
NVL-220ENST00000489194 CASKIN1Q8WXD9 1431 aa12.71□□□□□ -0.37
NVL-220ENST00000489194 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
NVL-220ENST00000489194 TIAM1Q13009 1591 aa12.71□□□□□ -0.37
NVL-220ENST00000489194 UGGT2Q9NYU1 1516 aa12.71□□□□□ -0.38
NVL-220ENST00000489194 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
NVL-220ENST00000489194 SOX12O15370 315 aa12.7□□□□□ -0.38
NVL-220ENST00000489194 HRCP23327 699 aa12.7□□□□□ -0.38
NVL-220ENST00000489194 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
NVL-220ENST00000489194 PCF11O94913 1555 aaKnown RBP12.69□□□□□ -0.38
NVL-220ENST00000489194 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
NVL-220ENST00000489194 PHF8Q9UPP1 1060 aa12.68□□□□□ -0.38
NVL-220ENST00000489194 TTBK1Q5TCY1 1321 aaPredicted RBP12.66□□□□□ -0.38
NVL-220ENST00000489194 PBX2P40425 430 aa12.65□□□□□ -0.38
NVL-220ENST00000489194 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
NVL-220ENST00000489194 NUP160Q12769 1436 aa12.64□□□□□ -0.39
NVL-220ENST00000489194 CARMIL2Q6F5E8 1435 aa12.64□□□□□ -0.39
NVL-220ENST00000489194 HECW1Q76N89 1606 aa12.64□□□□□ -0.39
NVL-220ENST00000489194 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
NVL-220ENST00000489194 ATP1B4Q9UN42 357 aaPredicted RBP12.64□□□□□ -0.39
NVL-220ENST00000489194 POTEEQ6S8J3 1075 aa12.63□□□□□ -0.39
NVL-220ENST00000489194 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
NVL-220ENST00000489194 LRRC9Q6ZRR7 1453 aa12.63□□□□□ -0.39
NVL-220ENST00000489194 KIAA0556O60303 1618 aa12.62□□□□□ -0.39
NVL-220ENST00000489194 CEP170Q5SW79 1584 aa12.61□□□□□ -0.39
NVL-220ENST00000489194 NUDT7P0C024 238 aa12.61□□□□□ -0.39
NVL-220ENST00000489194 KANK4Q5T7N3 995 aaPredicted RBP12.6□□□□□ -0.39
NVL-220ENST00000489194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.59□□□□□ -0.39
NVL-220ENST00000489194 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
NVL-220ENST00000489194 CHD1O14646 1710 aa12.58□□□□□ -0.4
NVL-220ENST00000489194 RRBP1Q9P2E9 1410 aaKnown RBP12.58□□□□□ -0.4
NVL-220ENST00000489194 MTUS2Q5JR59 1369 aa12.57□□□□□ -0.4
NVL-220ENST00000489194 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
NVL-220ENST00000489194 DISP1Q96F81 1524 aa12.57□□□□□ -0.4
NVL-220ENST00000489194 RIOK3O14730 519 aaKnown RBP12.56□□□□□ -0.4
NVL-220ENST00000489194 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
NVL-220ENST00000489194 JPH4Q96JJ6 628 aa12.56□□□□□ -0.4
NVL-220ENST00000489194 SUPT6HQ7KZ85 1726 aaKnown RBP12.56□□□□□ -0.4
NVL-220ENST00000489194 EHBP1L1Q8N3D4 1523 aa12.56□□□□□ -0.4
NVL-220ENST00000489194 CCNB3Q8WWL7 1395 aa12.56□□□□□ -0.4
NVL-220ENST00000489194 CDK11AQ9UQ88 783 aaPredicted RBP12.54□□□□□ -0.4
NVL-220ENST00000489194 RAPGEF6Q8TEU7 1601 aa12.54□□□□□ -0.4
NVL-220ENST00000489194 LRRIQ1Q96JM4 1722 aa12.52□□□□□ -0.41
NVL-220ENST00000489194 ADGRD1Q6QNK2 874 aa12.52□□□□□ -0.41
NVL-220ENST00000489194 CCER1Q8TC90 406 aaPredicted RBP12.52□□□□□ -0.41
NVL-220ENST00000489194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.52□□□□□ -0.41
NVL-220ENST00000489194 EPRSP07814 1512 aaKnown RBP12.52□□□□□ -0.41
NVL-220ENST00000489194 KIF3CO14782 793 aa12.51□□□□□ -0.41
NVL-220ENST00000489194 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
NVL-220ENST00000489194 C2orf72A6NCS6 295 aa12.5□□□□□ -0.41
NVL-220ENST00000489194 NLRP6P59044 892 aa12.5□□□□□ -0.41
NVL-220ENST00000489194 FBXO22Q8NEZ5 403 aa12.49□□□□□ -0.41
NVL-220ENST00000489194 PCDHGA4Q9Y5G9 962 aa12.49□□□□□ -0.41
NVL-220ENST00000489194 SHROOM2Q13796 1616 aa12.48□□□□□ -0.41
NVL-220ENST00000489194 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
NVL-220ENST00000489194 PHLDB1Q86UU1 1377 aa12.45□□□□□ -0.42
NVL-220ENST00000489194 ARHGAP33O14559 1287 aa12.45□□□□□ -0.42
NVL-220ENST00000489194 SLC34A2O95436 690 aa12.45□□□□□ -0.42
NVL-220ENST00000489194 NCOA2Q15596 1464 aa12.45□□□□□ -0.42
NVL-220ENST00000489194 MYOM3Q5VTT5 1437 aa12.45□□□□□ -0.42
NVL-220ENST00000489194 FGD6Q6ZV73 1430 aa12.44□□□□□ -0.42
NVL-220ENST00000489194 NUP153P49790 1475 aaKnown RBP12.43□□□□□ -0.42
NVL-220ENST00000489194 PTPRGP23470 1445 aa12.43□□□□□ -0.42
NVL-220ENST00000489194 CLSPNQ9HAW4 1339 aa12.42□□□□□ -0.42
NVL-220ENST00000489194 FAM50AQ14320 339 aaKnown RBP12.42□□□□□ -0.42
NVL-220ENST00000489194 ABCA8O94911 1581 aa12.42□□□□□ -0.42
NVL-220ENST00000489194 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
NVL-220ENST00000489194 CDK13Q14004 1512 aaKnown RBP12.42□□□□□ -0.42
NVL-220ENST00000489194 MIA2Q96PC5 1412 aa12.41□□□□□ -0.42
NVL-220ENST00000489194 CLASP1Q7Z460 1538 aa12.41□□□□□ -0.42
NVL-220ENST00000489194 HRO43593 1189 aa12.4□□□□□ -0.42
NVL-220ENST00000489194 ACIN1Q9UKV3 1341 aaKnown RBP12.39□□□□□ -0.43
NVL-220ENST00000489194 ITSN2Q9NZM3 1697 aa12.39□□□□□ -0.43
NVL-220ENST00000489194 TROQ12816 1431 aaPredicted RBP12.39□□□□□ -0.43
NVL-220ENST00000489194 PLB1Q6P1J6 1458 aa12.39□□□□□ -0.43
NVL-220ENST00000489194 ADCY10Q96PN6 1610 aa12.38□□□□□ -0.43
NVL-220ENST00000489194 PTPN23Q9H3S7 1636 aa12.38□□□□□ -0.43
NVL-220ENST00000489194 PLEKHD1A6NEE1 506 aa12.38□□□□□ -0.43
NVL-220ENST00000489194 TK2O00142 265 aa12.38□□□□□ -0.43
NVL-220ENST00000489194 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
NVL-220ENST00000489194 KCTD12Q96CX2 325 aaKnown RBP12.38□□□□□ -0.43
NVL-220ENST00000489194 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
NVL-220ENST00000489194 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
NVL-220ENST00000489194 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
NVL-220ENST00000489194 PSDA5PKW4 1024 aaPredicted RBP12.36□□□□□ -0.43
NVL-220ENST00000489194 ITGAEP38570 1179 aa12.36□□□□□ -0.43
NVL-220ENST00000489194 UACAQ9BZF9 1416 aa12.36□□□□□ -0.43
NVL-220ENST00000489194 SETD5Q9C0A6 1442 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms