RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 NPDC1Q9NQX5 325 aaPredicted RBP12.95□□□□□ -0.34
PHF11-215ENST00000488958 ADAM33Q9BZ11 813 aa12.94□□□□□ -0.34
PHF11-215ENST00000488958 MINK1Q8N4C8 1332 aaPredicted RBP12.94□□□□□ -0.34
PHF11-215ENST00000488958 C6orf132Q5T0Z8 1188 aa12.93□□□□□ -0.34
PHF11-215ENST00000488958 MAP2K5Q13163 448 aa12.92□□□□□ -0.34
PHF11-215ENST00000488958 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
PHF11-215ENST00000488958 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
PHF11-215ENST00000488958 BRPF1P55201 1214 aaPredicted RBP12.91□□□□□ -0.34
PHF11-215ENST00000488958 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
PHF11-215ENST00000488958 IRF6O14896 467 aa12.89□□□□□ -0.35
PHF11-215ENST00000488958 TRIM66O15016 1216 aa12.88□□□□□ -0.35
PHF11-215ENST00000488958 CCDC102AQ96A19 550 aa12.88□□□□□ -0.35
PHF11-215ENST00000488958 CERKQ8TCT0 537 aa12.87□□□□□ -0.35
PHF11-215ENST00000488958 BCL2L12Q9HB09 334 aa12.85□□□□□ -0.35
PHF11-215ENST00000488958 ST18O60284 1047 aa12.84□□□□□ -0.35
PHF11-215ENST00000488958 PDE4DQ08499 809 aa12.83□□□□□ -0.36
PHF11-215ENST00000488958 PTPREP23469 700 aa12.81□□□□□ -0.36
PHF11-215ENST00000488958 PADI6Q6TGC4 694 aa12.81□□□□□ -0.36
PHF11-215ENST00000488958 ERBB3P21860 1342 aa12.81□□□□□ -0.36
PHF11-215ENST00000488958 COL9A1P20849 921 aa12.8□□□□□ -0.36
PHF11-215ENST00000488958 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
PHF11-215ENST00000488958 PRSS12P56730 875 aa12.79□□□□□ -0.36
PHF11-215ENST00000488958 GPBP1L1Q9HC44 474 aaPredicted RBP12.79□□□□□ -0.36
PHF11-215ENST00000488958 CDCA7LQ96GN5 454 aa12.78□□□□□ -0.36
PHF11-215ENST00000488958 EMP3P54852 163 aa12.77□□□□□ -0.37
PHF11-215ENST00000488958 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
PHF11-215ENST00000488958 MARVELD3Q96A59 401 aa12.77□□□□□ -0.37
PHF11-215ENST00000488958 PPP1R3GB7ZBB8 358 aa12.76□□□□□ -0.37
PHF11-215ENST00000488958 FAM161AQ3B820 660 aa12.76□□□□□ -0.37
PHF11-215ENST00000488958 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
PHF11-215ENST00000488958 RBM27Q9P2N5 1060 aaKnown RBP12.76□□□□□ -0.37
PHF11-215ENST00000488958 AMHR2Q16671 573 aa12.75□□□□□ -0.37
PHF11-215ENST00000488958 TTC13Q8NBP0 860 aa12.75□□□□□ -0.37
PHF11-215ENST00000488958 TMEM132AQ24JP5 1023 aa12.74□□□□□ -0.37
PHF11-215ENST00000488958 KDM4CQ9H3R0 1056 aa12.74□□□□□ -0.37
PHF11-215ENST00000488958 KCNH8Q96L42 1107 aa12.73□□□□□ -0.37
PHF11-215ENST00000488958 ADGRG1Q9Y653 693 aa12.73□□□□□ -0.37
PHF11-215ENST00000488958 OATP04181 439 aa12.72□□□□□ -0.37
PHF11-215ENST00000488958 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.37
PHF11-215ENST00000488958 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
PHF11-215ENST00000488958 PARP9Q8IXQ6 854 aa12.7□□□□□ -0.38
PHF11-215ENST00000488958 PHOX2BQ99453 314 aa12.7□□□□□ -0.38
PHF11-215ENST00000488958 FAM198AQ9UFP1 575 aa12.7□□□□□ -0.38
PHF11-215ENST00000488958 PSEN2P49810 448 aa12.69□□□□□ -0.38
PHF11-215ENST00000488958 METTL3Q86U44 580 aaKnown RBP12.69□□□□□ -0.38
PHF11-215ENST00000488958 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
PHF11-215ENST00000488958 TRIM6-TRIM34B2RNG4 842 aa12.67□□□□□ -0.38
PHF11-215ENST00000488958 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
PHF11-215ENST00000488958 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
PHF11-215ENST00000488958 MDM2Q00987 491 aaPredicted RBP12.66□□□□□ -0.38
PHF11-215ENST00000488958 PROX2Q3B8N5 592 aa12.66□□□□□ -0.38
PHF11-215ENST00000488958 RBM46Q8TBY0 533 aaKnown RBP12.66□□□□□ -0.38
PHF11-215ENST00000488958 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
PHF11-215ENST00000488958 POTEEQ6S8J3 1075 aa12.65□□□□□ -0.38
PHF11-215ENST00000488958 PACS2Q86VP3 889 aa12.65□□□□□ -0.38
PHF11-215ENST00000488958 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
PHF11-215ENST00000488958 ZNF687Q8N1G0 1237 aa12.64□□□□□ -0.39
PHF11-215ENST00000488958 NLRP7Q8WX94 980 aa12.64□□□□□ -0.39
PHF11-215ENST00000488958 REPIN1Q9BWE0 567 aaKnown RBP12.64□□□□□ -0.39
PHF11-215ENST00000488958 CLCN1P35523 988 aa12.63□□□□□ -0.39
PHF11-215ENST00000488958 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
PHF11-215ENST00000488958 NUDT18Q6ZVK8 323 aa12.63□□□□□ -0.39
PHF11-215ENST00000488958 ZBED2Q9BTP6 218 aa12.63□□□□□ -0.39
PHF11-215ENST00000488958 LCE2DQ5TA82 110 aaPredicted RBP12.62□□□□□ -0.39
PHF11-215ENST00000488958 HS3ST6Q96QI5 342 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 PNMA3Q9UL41 463 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 POTEB3A0JP26 581 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 C3orf80F5H4A9 247 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 ONECUT3O60422 494 aaPredicted RBP12.62□□□□□ -0.39
PHF11-215ENST00000488958 PBX2P40425 430 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 POTEBQ6S5H4 581 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 TATDN2Q93075 761 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 EYA1Q99502 592 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 TMUB1Q9BVT8 246 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 FAM117AQ9C073 453 aa12.62□□□□□ -0.39
PHF11-215ENST00000488958 KIAA1468Q9P260 1216 aa12.61□□□□□ -0.39
PHF11-215ENST00000488958 DAXXQ9UER7 740 aaPredicted RBP12.6□□□□□ -0.39
PHF11-215ENST00000488958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
PHF11-215ENST00000488958 RCCD1A6NED2 376 aa12.58□□□□□ -0.4
PHF11-215ENST00000488958 SMAPO00193 183 aa12.58□□□□□ -0.4
PHF11-215ENST00000488958 MS4A1P11836 297 aa12.57□□□□□ -0.4
PHF11-215ENST00000488958 DDRGK1Q96HY6 314 aa12.57□□□□□ -0.4
PHF11-215ENST00000488958 SLC4A5Q9BY07 1137 aa12.57□□□□□ -0.4
PHF11-215ENST00000488958 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
PHF11-215ENST00000488958 RABGEF1Q9UJ41 708 aa12.55□□□□□ -0.4
PHF11-215ENST00000488958 DNAJB2P25686 324 aa12.54□□□□□ -0.4
PHF11-215ENST00000488958 FAM217BQ9NTX9 383 aaPredicted RBP12.54□□□□□ -0.4
PHF11-215ENST00000488958 VPS9D1Q9Y2B5 631 aa12.54□□□□□ -0.4
PHF11-215ENST00000488958 PLEKHG3A1L390 1219 aa12.53□□□□□ -0.4
PHF11-215ENST00000488958 GTF3C3Q9Y5Q9 886 aa12.52□□□□□ -0.41
PHF11-215ENST00000488958 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
PHF11-215ENST00000488958 TMEM134Q9H6X4 195 aa12.49□□□□□ -0.41
PHF11-215ENST00000488958 BEGAINQ9BUH8 593 aa12.48□□□□□ -0.41
PHF11-215ENST00000488958 LSM11P83369 360 aaKnown RBP eCLIP12.47□□□□□ -0.41
PHF11-215ENST00000488958 TK2O00142 265 aa12.46□□□□□ -0.41
PHF11-215ENST00000488958 POTEMA6NI47 508 aa12.44□□□□□ -0.42
PHF11-215ENST00000488958 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms