RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 ITGAEP38570 1179 aa17.07■□□□□ 0.32
ARHGEF39-204ENST00000488918 NPATQ14207 1427 aa17.06■□□□□ 0.32
ARHGEF39-204ENST00000488918 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
ARHGEF39-204ENST00000488918 CLTCQ00610 1675 aaKnown RBP17.05■□□□□ 0.32
ARHGEF39-204ENST00000488918 DNMT1P26358 1616 aaKnown RBP17.05■□□□□ 0.32
ARHGEF39-204ENST00000488918 MROH2AA6NES4 1674 aa17.04■□□□□ 0.32
ARHGEF39-204ENST00000488918 C3P01024 1663 aa17.04■□□□□ 0.32
ARHGEF39-204ENST00000488918 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
ARHGEF39-204ENST00000488918 KDM5DQ9BY66 1539 aa17.04■□□□□ 0.32
ARHGEF39-204ENST00000488918 FAM135AQ9P2D6 1515 aa17.03■□□□□ 0.32
ARHGEF39-204ENST00000488918 ERBINQ96RT1 1412 aa17.03■□□□□ 0.32
ARHGEF39-204ENST00000488918 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
ARHGEF39-204ENST00000488918 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
ARHGEF39-204ENST00000488918 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
ARHGEF39-204ENST00000488918 PTPRKQ15262 1439 aa16.98■□□□□ 0.31
ARHGEF39-204ENST00000488918 NCOA1Q15788 1441 aa16.98■□□□□ 0.31
ARHGEF39-204ENST00000488918 TNRQ92752 1358 aa16.98■□□□□ 0.31
ARHGEF39-204ENST00000488918 FBXO31Q5XUX0 539 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF39-204ENST00000488918 PZPP20742 1482 aa16.95■□□□□ 0.3
ARHGEF39-204ENST00000488918 RNF17Q9BXT8 1623 aaKnown RBP16.95■□□□□ 0.3
ARHGEF39-204ENST00000488918 ANKRD50Q9ULJ7 1429 aa16.95■□□□□ 0.3
ARHGEF39-204ENST00000488918 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.94■□□□□ 0.3
ARHGEF39-204ENST00000488918 ADGRL2O95490 1459 aa16.93■□□□□ 0.3
ARHGEF39-204ENST00000488918 THEMISQ8N1K5 641 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF39-204ENST00000488918 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
ARHGEF39-204ENST00000488918 ZC3H13Q5T200 1668 aaKnown RBP16.93■□□□□ 0.3
ARHGEF39-204ENST00000488918 ABCC3O15438 1527 aa16.91■□□□□ 0.3
ARHGEF39-204ENST00000488918 ROCK1Q13464 1354 aa16.91■□□□□ 0.3
ARHGEF39-204ENST00000488918 PKD2Q13563 968 aa16.91■□□□□ 0.3
ARHGEF39-204ENST00000488918 A2ML1A8K2U0 1454 aa16.89■□□□□ 0.29
ARHGEF39-204ENST00000488918 CEP170BQ9Y4F5 1589 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF39-204ENST00000488918 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
ARHGEF39-204ENST00000488918 NLRP1Q9C000 1473 aa16.88■□□□□ 0.29
ARHGEF39-204ENST00000488918 PRDM15P57071 1507 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF39-204ENST00000488918 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
ARHGEF39-204ENST00000488918 ANKLE2Q86XL3 938 aa16.87■□□□□ 0.29
ARHGEF39-204ENST00000488918 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
ARHGEF39-204ENST00000488918 RRBP1Q9P2E9 1410 aaKnown RBP16.86■□□□□ 0.29
ARHGEF39-204ENST00000488918 PTPRTO14522 1441 aa16.84■□□□□ 0.29
ARHGEF39-204ENST00000488918 ARHGAP31Q2M1Z3 1444 aa16.84■□□□□ 0.29
ARHGEF39-204ENST00000488918 ERVK-7P63135 1459 aa16.84■□□□□ 0.29
ARHGEF39-204ENST00000488918 CEP152O94986 1710 aa16.84■□□□□ 0.29
ARHGEF39-204ENST00000488918 PLA2R1Q13018 1463 aa16.83■□□□□ 0.28
ARHGEF39-204ENST00000488918 MROH1Q8NDA8 1641 aa16.83■□□□□ 0.28
ARHGEF39-204ENST00000488918 UGGT1Q9NYU2 1555 aa16.83■□□□□ 0.28
ARHGEF39-204ENST00000488918 ZNF142P52746 1687 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF39-204ENST00000488918 NUP155O75694 1391 aa16.82■□□□□ 0.28
ARHGEF39-204ENST00000488918 EID1Q9Y6B2 187 aa16.82■□□□□ 0.28
ARHGEF39-204ENST00000488918 DEPDC5O75140 1603 aa16.81■□□□□ 0.28
ARHGEF39-204ENST00000488918 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
ARHGEF39-204ENST00000488918 SPATA31D1Q6ZQQ2 1576 aa16.8■□□□□ 0.28
ARHGEF39-204ENST00000488918 CERKQ8TCT0 537 aa16.79■□□□□ 0.28
ARHGEF39-204ENST00000488918 SLC52A1Q9NWF4 448 aa16.79■□□□□ 0.28
ARHGEF39-204ENST00000488918 LMTK2Q8IWU2 1503 aa16.79■□□□□ 0.28
ARHGEF39-204ENST00000488918 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.28
ARHGEF39-204ENST00000488918 HDGFP51858 240 aaKnown RBP16.77■□□□□ 0.28
ARHGEF39-204ENST00000488918 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF39-204ENST00000488918 FBXO41Q8TF61 875 aa16.77■□□□□ 0.28
ARHGEF39-204ENST00000488918 STRCQ7RTU9 1775 aa16.77■□□□□ 0.27
ARHGEF39-204ENST00000488918 RPRD2Q5VT52 1461 aaKnown RBP16.76■□□□□ 0.27
ARHGEF39-204ENST00000488918 BCANQ96GW7 911 aa16.76■□□□□ 0.27
ARHGEF39-204ENST00000488918 TXNDC2Q86VQ3 553 aa16.75■□□□□ 0.27
ARHGEF39-204ENST00000488918 EFCAB6Q5THR3 1501 aa16.75■□□□□ 0.27
ARHGEF39-204ENST00000488918 CFAP65Q6ZU64 1925 aaKnown RBP16.74■□□□□ 0.27
ARHGEF39-204ENST00000488918 VWDEQ8N2E2 1590 aa16.74■□□□□ 0.27
ARHGEF39-204ENST00000488918 IDI1Q13907 227 aa16.73■□□□□ 0.27
ARHGEF39-204ENST00000488918 PPP1R15AO75807 674 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF39-204ENST00000488918 UNC13BO14795 1591 aa16.72■□□□□ 0.27
ARHGEF39-204ENST00000488918 NPHP4O75161 1426 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF39-204ENST00000488918 TET3O43151 1660 aa16.71■□□□□ 0.27
ARHGEF39-204ENST00000488918 HFM1A2PYH4 1435 aa16.7■□□□□ 0.26
ARHGEF39-204ENST00000488918 NAIPQ13075 1403 aa16.7■□□□□ 0.26
ARHGEF39-204ENST00000488918 ZNF335Q9H4Z2 1342 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF39-204ENST00000488918 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
ARHGEF39-204ENST00000488918 SLC4A1APQ9BWU0 796 aaKnown RBP16.68■□□□□ 0.26
ARHGEF39-204ENST00000488918 NOS1P29475 1434 aa16.68■□□□□ 0.26
ARHGEF39-204ENST00000488918 SCAF11Q99590 1463 aaKnown RBP16.67■□□□□ 0.26
ARHGEF39-204ENST00000488918 TMEM2Q9UHN6 1383 aa16.67■□□□□ 0.26
ARHGEF39-204ENST00000488918 POLR1AO95602 1720 aaPredicted RBP16.67■□□□□ 0.26
ARHGEF39-204ENST00000488918 IQGAP3Q86VI3 1631 aa16.67■□□□□ 0.26
ARHGEF39-204ENST00000488918 GCC2Q8IWJ2 1684 aa16.66■□□□□ 0.26
ARHGEF39-204ENST00000488918 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.66■□□□□ 0.26
ARHGEF39-204ENST00000488918 ZNF326Q5BKZ1 582 aaKnown RBP16.65■□□□□ 0.26
ARHGEF39-204ENST00000488918 PIK3C2BO00750 1634 aa16.65■□□□□ 0.26
ARHGEF39-204ENST00000488918 UBR1Q8IWV7 1749 aa16.65■□□□□ 0.26
ARHGEF39-204ENST00000488918 MED14O60244 1454 aa16.63■□□□□ 0.25
ARHGEF39-204ENST00000488918 LTKP29376 864 aa16.63■□□□□ 0.25
ARHGEF39-204ENST00000488918 SYNMO15061 1565 aa16.63■□□□□ 0.25
ARHGEF39-204ENST00000488918 ADGRB3O60242 1522 aa16.62■□□□□ 0.25
ARHGEF39-204ENST00000488918 SLIT1O75093 1534 aa16.62■□□□□ 0.25
ARHGEF39-204ENST00000488918 IQGAP1P46940 1657 aa16.6■□□□□ 0.25
ARHGEF39-204ENST00000488918 UBAP1LF5GYI3 381 aa16.6■□□□□ 0.25
ARHGEF39-204ENST00000488918 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF39-204ENST00000488918 ARHGAP23Q9P227 1491 aa16.6■□□□□ 0.25
ARHGEF39-204ENST00000488918 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
ARHGEF39-204ENST00000488918 E9PCH4 1651 aa16.59■□□□□ 0.25
ARHGEF39-204ENST00000488918 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
ARHGEF39-204ENST00000488918 CPS1P31327 1500 aa16.59■□□□□ 0.25
ARHGEF39-204ENST00000488918 KDM5AP29375 1690 aaKnown RBP16.59■□□□□ 0.25
ARHGEF39-204ENST00000488918 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms