RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, human

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNB1-215	ENST00000488914	EPAS1	Q99814	870 aa		12.4	□□□□□ -0.42
CTNNB1-215	ENST00000488914	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.4	□□□□□ -0.42
CTNNB1-215	ENST00000488914	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.39	□□□□□ -0.43
CTNNB1-215	ENST00000488914	PROX2	Q3B8N5	592 aa		12.39	□□□□□ -0.43
CTNNB1-215	ENST00000488914	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.38	□□□□□ -0.43
CTNNB1-215	ENST00000488914	PRIM1	P49642	420 aa	Known RBP	12.38	□□□□□ -0.43
CTNNB1-215	ENST00000488914	C6orf132	Q5T0Z8	1188 aa		12.38	□□□□□ -0.43
CTNNB1-215	ENST00000488914	PPP1R3G	B7ZBB8	358 aa		12.37	□□□□□ -0.43
CTNNB1-215	ENST00000488914	NBR1	Q14596	966 aa		12.37	□□□□□ -0.43
CTNNB1-215	ENST00000488914	KCTD12	Q96CX2	325 aa	Known RBP	12.36	□□□□□ -0.43
CTNNB1-215	ENST00000488914	STAC3	Q96MF2	364 aa		12.36	□□□□□ -0.43
CTNNB1-215	ENST00000488914	PLCB2	Q00722	1185 aa		12.35	□□□□□ -0.43
CTNNB1-215	ENST00000488914	GRXCR2	A6NFK2	248 aa		12.34	□□□□□ -0.43
CTNNB1-215	ENST00000488914	TSR1	Q2NL82	804 aa	Known RBP	12.34	□□□□□ -0.43
CTNNB1-215	ENST00000488914	EN1	Q05925	392 aa	Predicted RBP	12.32	□□□□□ -0.44
CTNNB1-215	ENST00000488914	KCNV2	Q8TDN2	545 aa		12.32	□□□□□ -0.44
CTNNB1-215	ENST00000488914	MAP3K7	O43318	606 aa		12.3	□□□□□ -0.44
CTNNB1-215	ENST00000488914	MRPL50	Q8N5N7	158 aa	Known RBP	12.29	□□□□□ -0.44
CTNNB1-215	ENST00000488914	OSBP	P22059	807 aa		12.28	□□□□□ -0.44
CTNNB1-215	ENST00000488914	KIAA1468	Q9P260	1216 aa		12.28	□□□□□ -0.44
CTNNB1-215	ENST00000488914	HCST	Q9UBK5	93 aa		12.28	□□□□□ -0.44
CTNNB1-215	ENST00000488914	RABGEF1	Q9UJ41	708 aa		12.27	□□□□□ -0.45
CTNNB1-215	ENST00000488914	PTPN5	P54829	565 aa		12.24	□□□□□ -0.45
CTNNB1-215	ENST00000488914	ARHGEF1	Q92888	912 aa	Known RBP	12.24	□□□□□ -0.45
CTNNB1-215	ENST00000488914	NBPF3	Q9H094	633 aa		12.24	□□□□□ -0.45
CTNNB1-215	ENST00000488914	CDHR5	Q9HBB8	845 aa		12.24	□□□□□ -0.45
CTNNB1-215	ENST00000488914	GOLGA8CP	A6NN73	597 aa		12.23	□□□□□ -0.45
CTNNB1-215	ENST00000488914	TRIM6-TRIM34	B2RNG4	842 aa		12.23	□□□□□ -0.45
CTNNB1-215	ENST00000488914	MLLT3	P42568	568 aa	Predicted RBP	12.23	□□□□□ -0.45
CTNNB1-215	ENST00000488914	WNT2B	Q93097	391 aa		12.23	□□□□□ -0.45
CTNNB1-215	ENST00000488914	THSD4	Q6ZMP0	1018 aa		12.22	□□□□□ -0.45
CTNNB1-215	ENST00000488914	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.22	□□□□□ -0.45
CTNNB1-215	ENST00000488914	TSKS	Q9UJT2	592 aa		12.22	□□□□□ -0.45
CTNNB1-215	ENST00000488914	FAM198A	Q9UFP1	575 aa		12.21	□□□□□ -0.45
CTNNB1-215	ENST00000488914	ONECUT3	O60422	494 aa	Predicted RBP	12.19	□□□□□ -0.46
CTNNB1-215	ENST00000488914	C3orf80	F5H4A9	247 aa		12.18	□□□□□ -0.46
CTNNB1-215	ENST00000488914	HAP1	P54257	671 aa	Predicted RBP	12.18	□□□□□ -0.46
CTNNB1-215	ENST00000488914	CDCA7L	Q96GN5	454 aa		12.17	□□□□□ -0.46
CTNNB1-215	ENST00000488914	BCAM	P50895	628 aa		12.15	□□□□□ -0.46
CTNNB1-215	ENST00000488914	PRSS12	P56730	875 aa		12.15	□□□□□ -0.46
CTNNB1-215	ENST00000488914	ZFR	Q96KR1	1074 aa	Known RBP	12.15	□□□□□ -0.46
CTNNB1-215	ENST00000488914	PLA2G2E	Q9NZK7	142 aa		12.15	□□□□□ -0.46
CTNNB1-215	ENST00000488914	SMAP	O00193	183 aa		12.14	□□□□□ -0.47
CTNNB1-215	ENST00000488914	LAPTM4B	Q86VI4	370 aa		12.14	□□□□□ -0.47
CTNNB1-215	ENST00000488914	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.14	□□□□□ -0.47
CTNNB1-215	ENST00000488914	KDM2A	Q9Y2K7	1162 aa		12.13	□□□□□ -0.47
CTNNB1-215	ENST00000488914	SEMA3E	O15041	775 aa		12.12	□□□□□ -0.47
CTNNB1-215	ENST00000488914	ANKK1	Q8NFD2	765 aa		12.12	□□□□□ -0.47
CTNNB1-215	ENST00000488914	PACS2	Q86VP3	889 aa		12.11	□□□□□ -0.47
CTNNB1-215	ENST00000488914	FAM98C	Q17RN3	349 aa	Known RBP	12.1	□□□□□ -0.47
CTNNB1-215	ENST00000488914	P3H3	Q8IVL6	736 aa		12.1	□□□□□ -0.47
CTNNB1-215	ENST00000488914	SOWAHB	A6NEL2	793 aa		12.09	□□□□□ -0.47
CTNNB1-215	ENST00000488914	CERK	Q8TCT0	537 aa		12.09	□□□□□ -0.47
CTNNB1-215	ENST00000488914	PADI6	Q6TGC4	694 aa		12.06	□□□□□ -0.48
CTNNB1-215	ENST00000488914	TATDN2	Q93075	761 aa		12.06	□□□□□ -0.48
CTNNB1-215	ENST00000488914	PNMA3	Q9UL41	463 aa		12.06	□□□□□ -0.48
CTNNB1-215	ENST00000488914	WBP1L	Q9NX94	342 aa		12.05	□□□□□ -0.48
CTNNB1-215	ENST00000488914	NUDT18	Q6ZVK8	323 aa		12.04	□□□□□ -0.48
CTNNB1-215	ENST00000488914	TTC13	Q8NBP0	860 aa		12.04	□□□□□ -0.48
CTNNB1-215	ENST00000488914	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.02	□□□□□ -0.49
CTNNB1-215	ENST00000488914	NBPF26	B4DH59	902 aa		12.01	□□□□□ -0.49
CTNNB1-215	ENST00000488914	SAMD7	Q7Z3H4	446 aa		12.01	□□□□□ -0.49
CTNNB1-215	ENST00000488914	LRCH3	Q96II8	777 aa		12.01	□□□□□ -0.49
CTNNB1-215	ENST00000488914	RBM27	Q9P2N5	1060 aa	Known RBP	12.01	□□□□□ -0.49
CTNNB1-215	ENST00000488914	PTGDR	Q13258	359 aa		12	□□□□□ -0.49
CTNNB1-215	ENST00000488914	HPS5	Q9UPZ3	1129 aa		12	□□□□□ -0.49
CTNNB1-215	ENST00000488914	NUTM2F	A1L443	756 aa		11.99	□□□□□ -0.49
CTNNB1-215	ENST00000488914	TESPA1	A2RU30	521 aa	Predicted RBP	11.99	□□□□□ -0.49
CTNNB1-215	ENST00000488914	TSR3	Q9UJK0	312 aa	Known RBP	11.97	□□□□□ -0.49
CTNNB1-215	ENST00000488914	RBM26	Q5T8P6	1007 aa	Known RBP	11.96	□□□□□ -0.49
CTNNB1-215	ENST00000488914	FAM161A	Q3B820	660 aa		11.95	□□□□□ -0.5
CTNNB1-215	ENST00000488914	EYA1	Q99502	592 aa		11.94	□□□□□ -0.5
CTNNB1-215	ENST00000488914	PPP4C	P60510	307 aa		11.91	□□□□□ -0.5
CTNNB1-215	ENST00000488914	VSIG10	Q8N0Z9	540 aa		11.91	□□□□□ -0.5
CTNNB1-215	ENST00000488914	SWT1	Q5T5J6	900 aa	Known RBP	11.9	□□□□□ -0.5
CTNNB1-215	ENST00000488914	IFFO2	Q5TF58	517 aa		11.9	□□□□□ -0.5
CTNNB1-215	ENST00000488914	NYAP1	Q6ZVC0	841 aa		11.89	□□□□□ -0.51
CTNNB1-215	ENST00000488914	RNF40	O75150	1001 aa		11.88	□□□□□ -0.51
CTNNB1-215	ENST00000488914	FCHSD2	O94868	740 aa		11.88	□□□□□ -0.51
CTNNB1-215	ENST00000488914	ITGBL1	O95965	494 aa	Predicted RBP	11.88	□□□□□ -0.51
CTNNB1-215	ENST00000488914	ADGRG1	Q9Y653	693 aa		11.88	□□□□□ -0.51
CTNNB1-215	ENST00000488914	FECH	P22830	423 aa		11.85	□□□□□ -0.51
CTNNB1-215	ENST00000488914		A0A0G2JS52	829 aa		11.84	□□□□□ -0.51
CTNNB1-215	ENST00000488914	GPR37	O15354	613 aa		11.84	□□□□□ -0.51
CTNNB1-215	ENST00000488914	HDGF	P51858	240 aa	Known RBP	11.84	□□□□□ -0.51
CTNNB1-215	ENST00000488914	APLP1	P51693	650 aa		11.83	□□□□□ -0.52
CTNNB1-215	ENST00000488914	SMYD5	Q6GMV2	418 aa		11.83	□□□□□ -0.52
CTNNB1-215	ENST00000488914	KCNC4	Q03721	635 aa		11.81	□□□□□ -0.52
CTNNB1-215	ENST00000488914	TJAP1	Q5JTD0	557 aa		11.81	□□□□□ -0.52
CTNNB1-215	ENST00000488914	RBM46	Q8TBY0	533 aa	Known RBP	11.81	□□□□□ -0.52
CTNNB1-215	ENST00000488914	RCCD1	A6NED2	376 aa		11.8	□□□□□ -0.52
CTNNB1-215	ENST00000488914	DNAJB2	P25686	324 aa		11.79	□□□□□ -0.52
CTNNB1-215	ENST00000488914	HIC1	Q14526	733 aa		11.79	□□□□□ -0.52
CTNNB1-215	ENST00000488914	SLF2	Q8IX21	1173 aa		11.79	□□□□□ -0.52
CTNNB1-215	ENST00000488914	MTR	Q99707	1265 aa		11.78	□□□□□ -0.52
CTNNB1-215	ENST00000488914	TMEM134	Q9H6X4	195 aa		11.78	□□□□□ -0.52
CTNNB1-215	ENST00000488914	ZNF516	Q92618	1163 aa		11.77	□□□□□ -0.53
CTNNB1-215	ENST00000488914	GNPAT	O15228	680 aa		11.76	□□□□□ -0.53
CTNNB1-215	ENST00000488914	PXYLP1	Q8TE99	480 aa		11.76	□□□□□ -0.53
CTNNB1-215	ENST00000488914	METTL3	Q86U44	580 aa	Known RBP	11.73	□□□□□ -0.53

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