RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 SLC4A3P48751 1232 aa8.14□□□□□ -1.11
SIK3-212ENST00000488337 WWC1Q8IX03 1113 aa8.14□□□□□ -1.11
SIK3-212ENST00000488337 ANTXR1Q9H6X2 564 aa8.14□□□□□ -1.11
SIK3-212ENST00000488337 LAMC3Q9Y6N6 1575 aa8.14□□□□□ -1.11
SIK3-212ENST00000488337 ZNF622Q969S3 477 aaKnown RBP eCLIP8.13□□□□□ -1.116e-7■□□□□ 9.2
SIK3-212ENST00000488337 POLR1AO95602 1720 aaPredicted RBP8.13□□□□□ -1.11
SIK3-212ENST00000488337 KDM5BQ9UGL1 1544 aa8.13□□□□□ -1.11
SIK3-212ENST00000488337 DYNC1I1O14576 645 aa8.13□□□□□ -1.11
SIK3-212ENST00000488337 TOP2BQ02880 1626 aa8.13□□□□□ -1.11
SIK3-212ENST00000488337 MRE11P49959 708 aa8.13□□□□□ -1.11
SIK3-212ENST00000488337 AXDND1Q5T1B0 1012 aaPredicted RBP8.13□□□□□ -1.11
SIK3-212ENST00000488337 ARHGAP35Q9NRY4 1499 aa8.13□□□□□ -1.11
SIK3-212ENST00000488337 FHAD1B1AJZ9 1412 aa8.12□□□□□ -1.11
SIK3-212ENST00000488337 TULP2O00295 520 aa8.12□□□□□ -1.11
SIK3-212ENST00000488337 MYCNP04198 464 aaPredicted RBP8.12□□□□□ -1.11
SIK3-212ENST00000488337 TRHP20396 242 aaPredicted RBP8.12□□□□□ -1.11
SIK3-212ENST00000488337 TMED8Q6PL24 325 aaPredicted RBP8.12□□□□□ -1.11
SIK3-212ENST00000488337 NGEFQ8N5V2 710 aa8.12□□□□□ -1.11
SIK3-212ENST00000488337 ISY1Q9ULR0 285 aaKnown RBP8.12□□□□□ -1.11
SIK3-212ENST00000488337 CARMIL1Q5VZK9 1371 aa8.12□□□□□ -1.11
SIK3-212ENST00000488337 CDK11BP21127 795 aaKnown RBP8.12□□□□□ -1.11
SIK3-212ENST00000488337 FAM9BQ8IZU0 186 aa8.11□□□□□ -1.11
SIK3-212ENST00000488337 CARD10Q9BWT7 1032 aa8.11□□□□□ -1.11
SIK3-212ENST00000488337 CCDC184Q52MB2 194 aa8.11□□□□□ -1.11
SIK3-212ENST00000488337 TICAM2Q86XR7 235 aa8.11□□□□□ -1.11
SIK3-212ENST00000488337 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.11□□□□□ -1.11
SIK3-212ENST00000488337 POLR3GLQ9BT43 218 aa8.11□□□□□ -1.11
SIK3-212ENST00000488337 FAM13BQ9NYF5 915 aa8.1□□□□□ -1.11
SIK3-212ENST00000488337 DNAJC2Q99543 621 aaKnown RBP8.1□□□□□ -1.11
SIK3-212ENST00000488337 NUDCQ9Y266 331 aa8.1□□□□□ -1.11
SIK3-212ENST00000488337 NLRP1Q9C000 1473 aa8.1□□□□□ -1.11
SIK3-212ENST00000488337 MTUS2Q5JR59 1369 aa8.1□□□□□ -1.11
SIK3-212ENST00000488337 FAM193AP78312 1265 aa8.09□□□□□ -1.11
SIK3-212ENST00000488337 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
SIK3-212ENST00000488337 PPP1R9BQ96SB3 815 aa8.09□□□□□ -1.11
SIK3-212ENST00000488337 TAOK2Q9UL54 1235 aa8.09□□□□□ -1.11
SIK3-212ENST00000488337 BIVM-ERCC5R4GMW8 1640 aa8.09□□□□□ -1.11
SIK3-212ENST00000488337 ARID3AQ99856 593 aa8.09□□□□□ -1.11
SIK3-212ENST00000488337 C8orf34Q49A92 452 aa8.08□□□□□ -1.12
SIK3-212ENST00000488337 MRS2Q9HD23 443 aa8.08□□□□□ -1.12
SIK3-212ENST00000488337 TNNT2P45379 298 aaPredicted RBP8.08□□□□□ -1.12
SIK3-212ENST00000488337 IGF1RP08069 1367 aa8.08□□□□□ -1.12
SIK3-212ENST00000488337 ZNF500O60304 480 aaPredicted RBP8.08□□□□□ -1.12
SIK3-212ENST00000488337 LRRC9Q6ZRR7 1453 aa8.08□□□□□ -1.12
SIK3-212ENST00000488337 PDS5BQ9NTI5 1447 aa8.07□□□□□ -1.12
SIK3-212ENST00000488337 DNTTIP2Q5QJE6 756 aaKnown RBP8.07□□□□□ -1.12
SIK3-212ENST00000488337 TMC1Q8TDI8 760 aa8.07□□□□□ -1.12
SIK3-212ENST00000488337 GRPEL1Q9HAV7 217 aa8.07□□□□□ -1.12
SIK3-212ENST00000488337 USP19O94966 1318 aa8.07□□□□□ -1.12
SIK3-212ENST00000488337 MCCP23508 829 aa8.07□□□□□ -1.12
SIK3-212ENST00000488337 FAM43BQ6ZT52 329 aaPredicted RBP8.07□□□□□ -1.12
SIK3-212ENST00000488337 CFAP65Q6ZU64 1925 aaKnown RBP8.07□□□□□ -1.12
SIK3-212ENST00000488337 CAPN2P17655 700 aa8.06□□□□□ -1.12
SIK3-212ENST00000488337 ZSCAN30Q86W11 494 aa8.06□□□□□ -1.12
SIK3-212ENST00000488337 MYH16Q9H6N6 1097 aa8.06□□□□□ -1.12
SIK3-212ENST00000488337 CHIC2Q9UKJ5 165 aa8.06□□□□□ -1.12
SIK3-212ENST00000488337 PHF14O94880 888 aa8.06□□□□□ -1.12
SIK3-212ENST00000488337 EGFL6Q8IUX8 553 aa8.06□□□□□ -1.12
SIK3-212ENST00000488337 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.06□□□□□ -1.12
SIK3-212ENST00000488337 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.06□□□□□ -1.12
SIK3-212ENST00000488337 ZNF710Q8N1W2 664 aa8.06□□□□□ -1.12
SIK3-212ENST00000488337 CNTLNQ9NXG0 1405 aa8.06□□□□□ -1.12
SIK3-212ENST00000488337 FANCD2Q9BXW9 1451 aa8.06□□□□□ -1.12
SIK3-212ENST00000488337 SCAPERQ9BY12 1400 aa8.05□□□□□ -1.12
SIK3-212ENST00000488337 UQCRHLA0A096LP55 91 aa8.05□□□□□ -1.12
SIK3-212ENST00000488337 E9PSI1 815 aa8.05□□□□□ -1.12
SIK3-212ENST00000488337 PTMAP06454 111 aaKnown RBP8.05□□□□□ -1.12
SIK3-212ENST00000488337 UQCRHP07919 91 aa8.05□□□□□ -1.12
SIK3-212ENST00000488337 CERS3Q8IU89 383 aa8.05□□□□□ -1.12
SIK3-212ENST00000488337 RRP7BPQ9NSQ0 103 aa8.05□□□□□ -1.12
SIK3-212ENST00000488337 PRR29P0C7W0 189 aa8.05□□□□□ -1.12
SIK3-212ENST00000488337 MAPK8IP2Q13387 824 aaPredicted RBP8.05□□□□□ -1.12
SIK3-212ENST00000488337 ATP2B3Q16720 1220 aa8.05□□□□□ -1.12
SIK3-212ENST00000488337 RALBP1Q15311 655 aa8.05□□□□□ -1.12
SIK3-212ENST00000488337 KDM2BQ8NHM5 1336 aa8.04□□□□□ -1.12
SIK3-212ENST00000488337 HSPA5P11021 654 aaKnown RBP8.04□□□□□ -1.12
SIK3-212ENST00000488337 CEP120Q8N960 986 aa8.04□□□□□ -1.12
SIK3-212ENST00000488337 CUX1P39880 1505 aa8.04□□□□□ -1.12
SIK3-212ENST00000488337 ARID3CA6NKF2 412 aa8.04□□□□□ -1.12
SIK3-212ENST00000488337 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
SIK3-212ENST00000488337 GTF2F1P35269 517 aaKnown RBP eCLIP8.04□□□□□ -1.12
SIK3-212ENST00000488337 HS1BP3Q53T59 392 aa8.04□□□□□ -1.12
SIK3-212ENST00000488337 CGNQ9P2M7 1197 aaKnown RBP8.04□□□□□ -1.12
SIK3-212ENST00000488337 FOXD4L1Q9NU39 408 aa8.03□□□□□ -1.12
SIK3-212ENST00000488337 TIAM1Q13009 1591 aa8.03□□□□□ -1.12
SIK3-212ENST00000488337 SIRT1Q96EB6 747 aa8.02□□□□□ -1.13
SIK3-212ENST00000488337 DNMBPQ6XZF7 1577 aa8.02□□□□□ -1.13
SIK3-212ENST00000488337 FHOD3Q2V2M9 1422 aa8.02□□□□□ -1.13
SIK3-212ENST00000488337 NBPF20Q3BBV1 942 aa8.02□□□□□ -1.13
SIK3-212ENST00000488337 MAP3K1Q13233 1512 aa8.01□□□□□ -1.13
SIK3-212ENST00000488337 CHMP4CQ96CF2 233 aa8.01□□□□□ -1.13
SIK3-212ENST00000488337 EXOC6Q8TAG9 804 aa8.01□□□□□ -1.13
SIK3-212ENST00000488337 TRIM44Q96DX7 344 aaPredicted RBP8.01□□□□□ -1.13
SIK3-212ENST00000488337 RRP1P56182 461 aaKnown RBP8□□□□□ -1.13
SIK3-212ENST00000488337 PRKRIP1Q9H875 184 aaPredicted RBP8□□□□□ -1.13
SIK3-212ENST00000488337 EFCC1Q9HA90 598 aa8□□□□□ -1.13
SIK3-212ENST00000488337 RAD50Q92878 1312 aa8□□□□□ -1.13
SIK3-212ENST00000488337 MCM4P33991 863 aa8□□□□□ -1.13
SIK3-212ENST00000488337 PIAS4Q8N2W9 510 aaPredicted RBP8□□□□□ -1.13
SIK3-212ENST00000488337 NOL7Q9UMY1 257 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms