RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 PRIM1P49642 420 aaKnown RBP11.9□□□□□ -0.5
VPS8-224ENST00000488255 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
VPS8-224ENST00000488255 PCDH10Q9P2E7 1040 aa11.9□□□□□ -0.5
VPS8-224ENST00000488255 OSBPP22059 807 aa11.89□□□□□ -0.51
VPS8-224ENST00000488255 DMRTA1Q5VZB9 504 aa11.88□□□□□ -0.51
VPS8-224ENST00000488255 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
VPS8-224ENST00000488255 EN1Q05925 392 aaPredicted RBP11.87□□□□□ -0.51
VPS8-224ENST00000488255 TSR1Q2NL82 804 aaKnown RBP11.87□□□□□ -0.51
VPS8-224ENST00000488255 C6orf132Q5T0Z8 1188 aa11.87□□□□□ -0.51
VPS8-224ENST00000488255 LSM11P83369 360 aaKnown RBP eCLIP11.86□□□□□ -0.51
VPS8-224ENST00000488255 COL9A1P20849 921 aa11.83□□□□□ -0.52
VPS8-224ENST00000488255 SMYD5Q6GMV2 418 aa11.83□□□□□ -0.52
VPS8-224ENST00000488255 CDHR5Q9HBB8 845 aa11.82□□□□□ -0.52
VPS8-224ENST00000488255 NUTM2FA1L443 756 aa11.81□□□□□ -0.52
VPS8-224ENST00000488255 RBM26Q5T8P6 1007 aaKnown RBP11.81□□□□□ -0.52
VPS8-224ENST00000488255 PPP1R3GB7ZBB8 358 aa11.8□□□□□ -0.52
VPS8-224ENST00000488255 PROX2Q3B8N5 592 aa11.78□□□□□ -0.52
VPS8-224ENST00000488255 TULP1O00294 542 aaPredicted RBP11.77□□□□□ -0.53
VPS8-224ENST00000488255 ADGRD1Q6QNK2 874 aa11.77□□□□□ -0.53
VPS8-224ENST00000488255 ZBED2Q9BTP6 218 aa11.77□□□□□ -0.53
VPS8-224ENST00000488255 VPS9D1Q9Y2B5 631 aa11.75□□□□□ -0.53
VPS8-224ENST00000488255 SPNS2Q8IVW8 549 aa11.74□□□□□ -0.53
VPS8-224ENST00000488255 TK2O00142 265 aa11.72□□□□□ -0.53
VPS8-224ENST00000488255 STAC3Q96MF2 364 aa11.72□□□□□ -0.53
VPS8-224ENST00000488255 PLSCR2Q9NRY7 297 aa11.72□□□□□ -0.53
VPS8-224ENST00000488255 CDCA7LQ96GN5 454 aa11.7□□□□□ -0.54
VPS8-224ENST00000488255 NPDC1Q9NQX5 325 aaPredicted RBP11.7□□□□□ -0.54
VPS8-224ENST00000488255 PRSS12P56730 875 aa11.69□□□□□ -0.54
VPS8-224ENST00000488255 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
VPS8-224ENST00000488255 SLC4A5Q9BY07 1137 aa11.69□□□□□ -0.54
VPS8-224ENST00000488255 KIAA1468Q9P260 1216 aa11.69□□□□□ -0.54
VPS8-224ENST00000488255 TRIM6-TRIM34B2RNG4 842 aa11.68□□□□□ -0.54
VPS8-224ENST00000488255 GPIHBP1Q8IV16 184 aa11.68□□□□□ -0.54
VPS8-224ENST00000488255 FCHSD2O94868 740 aa11.67□□□□□ -0.54
VPS8-224ENST00000488255 PTGDRQ13258 359 aa11.67□□□□□ -0.54
VPS8-224ENST00000488255 BCANQ96GW7 911 aa11.67□□□□□ -0.54
VPS8-224ENST00000488255 TSKSQ9UJT2 592 aa11.67□□□□□ -0.54
VPS8-224ENST00000488255 HRO43593 1189 aa11.66□□□□□ -0.54
VPS8-224ENST00000488255 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
VPS8-224ENST00000488255 PADI6Q6TGC4 694 aa11.66□□□□□ -0.54
VPS8-224ENST00000488255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.66□□□□□ -0.54
VPS8-224ENST00000488255 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
VPS8-224ENST00000488255 SEPT9Q9UHD8 586 aaPredicted RBP11.65□□□□□ -0.54
VPS8-224ENST00000488255 RABGEF1Q9UJ41 708 aa11.65□□□□□ -0.54
VPS8-224ENST00000488255 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
VPS8-224ENST00000488255 PACS2Q86VP3 889 aa11.64□□□□□ -0.55
VPS8-224ENST00000488255 MRPL50Q8N5N7 158 aaKnown RBP11.64□□□□□ -0.55
VPS8-224ENST00000488255 SMAPO00193 183 aa11.63□□□□□ -0.55
VPS8-224ENST00000488255 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
VPS8-224ENST00000488255 MMRN1Q13201 1228 aa11.62□□□□□ -0.55
VPS8-224ENST00000488255 GOLGA8CPA6NN73 597 aa11.61□□□□□ -0.55
VPS8-224ENST00000488255 BHMG1C9JSJ3 638 aaPredicted RBP11.61□□□□□ -0.55
VPS8-224ENST00000488255 C3orf80F5H4A9 247 aa11.6□□□□□ -0.55
VPS8-224ENST00000488255 ONECUT3O60422 494 aaPredicted RBP11.6□□□□□ -0.55
VPS8-224ENST00000488255 PNMA3Q9UL41 463 aa11.6□□□□□ -0.55
VPS8-224ENST00000488255 FECHP22830 423 aa11.59□□□□□ -0.55
VPS8-224ENST00000488255 HIC1Q14526 733 aa11.59□□□□□ -0.55
VPS8-224ENST00000488255 FAM161AQ3B820 660 aa11.59□□□□□ -0.55
VPS8-224ENST00000488255 NUDT18Q6ZVK8 323 aa11.59□□□□□ -0.55
VPS8-224ENST00000488255 GNPATO15228 680 aa11.58□□□□□ -0.56
VPS8-224ENST00000488255 GPR37O15354 613 aa11.58□□□□□ -0.56
VPS8-224ENST00000488255 TATDN2Q93075 761 aa11.58□□□□□ -0.56
VPS8-224ENST00000488255 RNF166Q96A37 237 aaPredicted RBP11.58□□□□□ -0.56
VPS8-224ENST00000488255 KCTD12Q96CX2 325 aaKnown RBP11.58□□□□□ -0.56
VPS8-224ENST00000488255 RBM27Q9P2N5 1060 aaKnown RBP11.58□□□□□ -0.56
VPS8-224ENST00000488255 NBPF26B4DH59 902 aa11.57□□□□□ -0.56
VPS8-224ENST00000488255 TTC13Q8NBP0 860 aa11.55□□□□□ -0.56
VPS8-224ENST00000488255 FAM98CQ17RN3 349 aaKnown RBP11.53□□□□□ -0.56
VPS8-224ENST00000488255 WNT2BQ93097 391 aa11.53□□□□□ -0.56
VPS8-224ENST00000488255 ZFRQ96KR1 1074 aaKnown RBP11.52□□□□□ -0.57
VPS8-224ENST00000488255 LAPTM4BQ86VI4 370 aa11.51□□□□□ -0.57
VPS8-224ENST00000488255 ANKK1Q8NFD2 765 aa11.5□□□□□ -0.57
VPS8-224ENST00000488255 ZC3H15Q8WU90 426 aaKnown RBP11.5□□□□□ -0.57
VPS8-224ENST00000488255 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
VPS8-224ENST00000488255 RBM46Q8TBY0 533 aaKnown RBP11.49□□□□□ -0.57
VPS8-224ENST00000488255 PTPN5P54829 565 aa11.48□□□□□ -0.57
VPS8-224ENST00000488255 BCAMP50895 628 aa11.47□□□□□ -0.57
VPS8-224ENST00000488255 SAMD7Q7Z3H4 446 aa11.47□□□□□ -0.57
VPS8-224ENST00000488255 KRI1Q8N9T8 703 aaKnown RBP11.47□□□□□ -0.57
VPS8-224ENST00000488255 EYA1Q99502 592 aa11.47□□□□□ -0.57
VPS8-224ENST00000488255 RNF40O75150 1001 aa11.46□□□□□ -0.57
VPS8-224ENST00000488255 OATP04181 439 aa11.44□□□□□ -0.58
VPS8-224ENST00000488255 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
VPS8-224ENST00000488255 THSD4Q6ZMP0 1018 aa11.44□□□□□ -0.58
VPS8-224ENST00000488255 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
VPS8-224ENST00000488255 LRCH3Q96II8 777 aa11.44□□□□□ -0.58
VPS8-224ENST00000488255 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.44□□□□□ -0.58
VPS8-224ENST00000488255 RCCD1A6NED2 376 aa11.43□□□□□ -0.58
VPS8-224ENST00000488255 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
VPS8-224ENST00000488255 SWT1Q5T5J6 900 aaKnown RBP11.43□□□□□ -0.58
VPS8-224ENST00000488255 SOWAHBA6NEL2 793 aa11.42□□□□□ -0.58
VPS8-224ENST00000488255 METTL3Q86U44 580 aaKnown RBP11.42□□□□□ -0.58
VPS8-224ENST00000488255 PXYLP1Q8TE99 480 aa11.42□□□□□ -0.58
VPS8-224ENST00000488255 IRF6O14896 467 aa11.41□□□□□ -0.58
VPS8-224ENST00000488255 ZMYND10O75800 440 aa11.41□□□□□ -0.58
VPS8-224ENST00000488255 DNAJB2P25686 324 aa11.41□□□□□ -0.58
VPS8-224ENST00000488255 MINK1Q8N4C8 1332 aaPredicted RBP11.4□□□□□ -0.58
VPS8-224ENST00000488255 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
VPS8-224ENST00000488255 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
VPS8-224ENST00000488255 CCDC102AQ96A19 550 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms