RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.81■□□□□ 0.92
TFAP2A-215ENST00000488193 RICTORQ6R327 1708 aa20.8■□□□□ 0.92
TFAP2A-215ENST00000488193 L3MBTL2Q969R5 705 aa20.8■□□□□ 0.92
TFAP2A-215ENST00000488193 HECW2Q9P2P5 1572 aa20.79■□□□□ 0.92
TFAP2A-215ENST00000488193 KIF13AQ9H1H9 1805 aa20.79■□□□□ 0.92
TFAP2A-215ENST00000488193 RAPGEF3O95398 923 aa20.79■□□□□ 0.92
TFAP2A-215ENST00000488193 EIF2AK4Q9P2K8 1649 aaKnown RBP20.78■□□□□ 0.92
TFAP2A-215ENST00000488193 PLA2R1Q13018 1463 aa20.77■□□□□ 0.92
TFAP2A-215ENST00000488193 MROH1Q8NDA8 1641 aa20.77■□□□□ 0.92
TFAP2A-215ENST00000488193 TSPOAP1O95153 1857 aa20.77■□□□□ 0.91
TFAP2A-215ENST00000488193 FRMPD1Q5SYB0 1578 aa20.76■□□□□ 0.91
TFAP2A-215ENST00000488193 VWDEQ8N2E2 1590 aa20.76■□□□□ 0.91
TFAP2A-215ENST00000488193 ABCA6Q8N139 1617 aa20.75■□□□□ 0.91
TFAP2A-215ENST00000488193 MYT1LQ9UL68 1186 aa20.75■□□□□ 0.91
TFAP2A-215ENST00000488193 A2MP01023 1474 aa20.74■□□□□ 0.91
TFAP2A-215ENST00000488193 DIEXFQ68CQ4 756 aaKnown RBP20.74■□□□□ 0.91
TFAP2A-215ENST00000488193 PRDM15P57071 1507 aaPredicted RBP20.72■□□□□ 0.91
TFAP2A-215ENST00000488193 KIF3BO15066 747 aa20.71■□□□□ 0.91
TFAP2A-215ENST00000488193 E9PCH4 1651 aa20.7■□□□□ 0.91
TFAP2A-215ENST00000488193 DIP2CQ9Y2E4 1556 aa20.7■□□□□ 0.9
TFAP2A-215ENST00000488193 ATP10AO60312 1499 aa20.7■□□□□ 0.9
TFAP2A-215ENST00000488193 RNF17Q9BXT8 1623 aaKnown RBP20.69■□□□□ 0.9
TFAP2A-215ENST00000488193 BCORL1Q5H9F3 1711 aa20.69■□□□□ 0.9
TFAP2A-215ENST00000488193 NBPF8Q3BBV2 869 aa20.69■□□□□ 0.9
TFAP2A-215ENST00000488193 TET3O43151 1660 aa20.67■□□□□ 0.9
TFAP2A-215ENST00000488193 YEATS2Q9ULM3 1422 aa20.67■□□□□ 0.9
TFAP2A-215ENST00000488193 ZMYM4Q5VZL5 1548 aa20.67■□□□□ 0.9
TFAP2A-215ENST00000488193 CCDC144AA2RUR9 1427 aa20.63■□□□□ 0.89
TFAP2A-215ENST00000488193 COL17A1Q9UMD9 1497 aaPredicted RBP20.62■□□□□ 0.89
TFAP2A-215ENST00000488193 PTPRTO14522 1441 aa20.62■□□□□ 0.89
TFAP2A-215ENST00000488193 KANK1Q14678 1352 aa20.62■□□□□ 0.89
TFAP2A-215ENST00000488193 LMTK2Q8IWU2 1503 aa20.61■□□□□ 0.89
TFAP2A-215ENST00000488193 CEP152O94986 1710 aa20.59■□□□□ 0.89
TFAP2A-215ENST00000488193 SPHKAPQ2M3C7 1700 aa20.59■□□□□ 0.89
TFAP2A-215ENST00000488193 HIRIP3Q9BW71 556 aaPredicted RBP20.59■□□□□ 0.89
TFAP2A-215ENST00000488193 UHRF1BP1Q6BDS2 1440 aa20.58■□□□□ 0.89
TFAP2A-215ENST00000488193 TRPM2O94759 1503 aa20.58■□□□□ 0.89
TFAP2A-215ENST00000488193 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.89
TFAP2A-215ENST00000488193 CLTCL1P53675 1640 aa20.54■□□□□ 0.88
TFAP2A-215ENST00000488193 SPATA31E1Q6ZUB1 1445 aa20.54■□□□□ 0.88
TFAP2A-215ENST00000488193 GGT6Q6P531 493 aa20.54■□□□□ 0.88
TFAP2A-215ENST00000488193 ABCC3O15438 1527 aa20.54■□□□□ 0.88
TFAP2A-215ENST00000488193 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.87
TFAP2A-215ENST00000488193 DCAF11Q8TEB1 546 aa20.51■□□□□ 0.87
TFAP2A-215ENST00000488193 REREQ9P2R6 1566 aa20.51■□□□□ 0.87
TFAP2A-215ENST00000488193 SIGLEC1Q9BZZ2 1709 aa20.5■□□□□ 0.87
TFAP2A-215ENST00000488193 NPATQ14207 1427 aa20.49■□□□□ 0.87
TFAP2A-215ENST00000488193 RGL3Q3MIN7 710 aa20.49■□□□□ 0.87
TFAP2A-215ENST00000488193 RALGAPBQ86X10 1494 aa20.48■□□□□ 0.87
TFAP2A-215ENST00000488193 KDM2AQ9Y2K7 1162 aa20.48■□□□□ 0.87
TFAP2A-215ENST00000488193 UGGT1Q9NYU2 1555 aa20.47■□□□□ 0.87
TFAP2A-215ENST00000488193 CAMSAP1Q5T5Y3 1602 aa20.47■□□□□ 0.87
TFAP2A-215ENST00000488193 EIF4G2P78344 907 aaKnown RBP eCLIP20.47■□□□□ 0.87
TFAP2A-215ENST00000488193 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
TFAP2A-215ENST00000488193 MIER1Q8N108 512 aa20.47■□□□□ 0.87
TFAP2A-215ENST00000488193 PRAG1Q86YV5 1406 aa20.46■□□□□ 0.87
TFAP2A-215ENST00000488193 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.87
TFAP2A-215ENST00000488193 AGLP35573 1532 aa20.45■□□□□ 0.86
TFAP2A-215ENST00000488193 CFAP65Q6ZU64 1925 aaKnown RBP20.44■□□□□ 0.86
TFAP2A-215ENST00000488193 ARHGEF40Q8TER5 1519 aa20.44■□□□□ 0.86
TFAP2A-215ENST00000488193 ZC3H13Q5T200 1668 aaKnown RBP20.44■□□□□ 0.86
TFAP2A-215ENST00000488193 TRPM1Q7Z4N2 1603 aa20.43■□□□□ 0.86
TFAP2A-215ENST00000488193 NEURL4Q96JN8 1562 aa20.43■□□□□ 0.86
TFAP2A-215ENST00000488193 DNAJC5Q9H3Z4 198 aa20.43■□□□□ 0.86
TFAP2A-215ENST00000488193 ARHGAP31Q2M1Z3 1444 aa20.41■□□□□ 0.86
TFAP2A-215ENST00000488193 NOS1P29475 1434 aa20.4■□□□□ 0.86
TFAP2A-215ENST00000488193 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
TFAP2A-215ENST00000488193 C11orf95C9JLR9 678 aaPredicted RBP20.39■□□□□ 0.86
TFAP2A-215ENST00000488193 KIF1BO60333 1816 aa20.38■□□□□ 0.85
TFAP2A-215ENST00000488193 WASHC2AQ641Q2 1341 aa20.38■□□□□ 0.85
TFAP2A-215ENST00000488193 CNTLNQ9NXG0 1405 aa20.38■□□□□ 0.85
TFAP2A-215ENST00000488193 MROH2AA6NES4 1674 aa20.37■□□□□ 0.85
TFAP2A-215ENST00000488193 USP47Q96K76 1375 aa20.37■□□□□ 0.85
TFAP2A-215ENST00000488193 SYNMO15061 1565 aa20.37■□□□□ 0.85
TFAP2A-215ENST00000488193 MADDQ8WXG6 1647 aa20.36■□□□□ 0.85
TFAP2A-215ENST00000488193 PIK3C2BO00750 1634 aa20.35■□□□□ 0.85
TFAP2A-215ENST00000488193 GPRASP1Q5JY77 1395 aa20.35■□□□□ 0.85
TFAP2A-215ENST00000488193 ADGRB3O60242 1522 aa20.35■□□□□ 0.85
TFAP2A-215ENST00000488193 NBPF1Q3BBV0 1214 aa20.35■□□□□ 0.85
TFAP2A-215ENST00000488193 CARD11Q9BXL7 1154 aa20.34■□□□□ 0.85
TFAP2A-215ENST00000488193 IFT172Q9UG01 1749 aa20.34■□□□□ 0.85
TFAP2A-215ENST00000488193 LAMC1P11047 1609 aa20.32■□□□□ 0.84
TFAP2A-215ENST00000488193 ROCK2O75116 1388 aaKnown RBP20.32■□□□□ 0.84
TFAP2A-215ENST00000488193 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
TFAP2A-215ENST00000488193 PREX1Q8TCU6 1659 aa20.31■□□□□ 0.84
TFAP2A-215ENST00000488193 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
TFAP2A-215ENST00000488193 CCDC7Q96M83 1385 aa20.3■□□□□ 0.84
TFAP2A-215ENST00000488193 TRHP20396 242 aaPredicted RBP20.3■□□□□ 0.84
TFAP2A-215ENST00000488193 STAC3Q96MF2 364 aa20.3■□□□□ 0.84
TFAP2A-215ENST00000488193 CLTCQ00610 1675 aaKnown RBP20.3■□□□□ 0.84
TFAP2A-215ENST00000488193 MYOM2P54296 1465 aa20.28■□□□□ 0.84
TFAP2A-215ENST00000488193 KIF7Q2M1P5 1343 aa20.26■□□□□ 0.83
TFAP2A-215ENST00000488193 FBXO31Q5XUX0 539 aaPredicted RBP20.26■□□□□ 0.83
TFAP2A-215ENST00000488193 NRXN1Q9ULB1 1477 aa20.26■□□□□ 0.83
TFAP2A-215ENST00000488193 PPLO60437 1756 aa20.25■□□□□ 0.83
TFAP2A-215ENST00000488193 ST20-MTHFSA0A0A6YYL1 179 aa20.25■□□□□ 0.83
TFAP2A-215ENST00000488193 MLECQ14165 292 aa20.25■□□□□ 0.83
TFAP2A-215ENST00000488193 ADGRF5Q8IZF2 1346 aa20.25■□□□□ 0.83
TFAP2A-215ENST00000488193 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
TFAP2A-215ENST00000488193 IDI1Q13907 227 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms