RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 GPS2Q13227 327 aa10.22□□□□□ -0.77
MCF2L2-212ENST00000488149 CCDC146Q8IYE0 955 aa10.22□□□□□ -0.77
MCF2L2-212ENST00000488149 KIF3AQ9Y496 699 aa10.22□□□□□ -0.77
MCF2L2-212ENST00000488149 NUP155O75694 1391 aa10.22□□□□□ -0.77
MCF2L2-212ENST00000488149 E9PSI1 815 aa10.21□□□□□ -0.78
MCF2L2-212ENST00000488149 HDAC5Q9UQL6 1122 aa10.21□□□□□ -0.78
MCF2L2-212ENST00000488149 GOLGA6L19H0YKK7 550 aa10.21□□□□□ -0.78
MCF2L2-212ENST00000488149 MRE11P49959 708 aa10.21□□□□□ -0.78
MCF2L2-212ENST00000488149 TPM3P06753 285 aa10.2□□□□□ -0.78
MCF2L2-212ENST00000488149 ANKRD30AQ9BXX3 1397 aa10.2□□□□□ -0.78
MCF2L2-212ENST00000488149 NOL8Q76FK4 1167 aaKnown RBP10.2□□□□□ -0.78
MCF2L2-212ENST00000488149 CECR2Q9BXF3 1484 aa10.2□□□□□ -0.78
MCF2L2-212ENST00000488149 STK31Q9BXU1 1019 aa10.2□□□□□ -0.78
MCF2L2-212ENST00000488149 FOXD4L5Q5VV16 416 aaPredicted RBP10.19□□□□□ -0.78
MCF2L2-212ENST00000488149 FOXD4L4Q8WXT5 416 aaPredicted RBP10.19□□□□□ -0.78
MCF2L2-212ENST00000488149 TEX35Q5T0J7 233 aa10.19□□□□□ -0.78
MCF2L2-212ENST00000488149 EIF4G1Q04637 1599 aaKnown RBP10.19□□□□□ -0.78
MCF2L2-212ENST00000488149 HSP90B1P14625 803 aaKnown RBP10.19□□□□□ -0.78
MCF2L2-212ENST00000488149 TPM2P07951 284 aa10.19□□□□□ -0.78
MCF2L2-212ENST00000488149 PKNOX2Q96KN3 472 aa10.19□□□□□ -0.78
MCF2L2-212ENST00000488149 ZKSCAN2Q63HK3 967 aa10.18□□□□□ -0.78
MCF2L2-212ENST00000488149 BECN2A8MW95 431 aa10.18□□□□□ -0.78
MCF2L2-212ENST00000488149 SPAG9O60271 1321 aaKnown RBP10.18□□□□□ -0.78
MCF2L2-212ENST00000488149 LMOD3Q0VAK6 560 aa10.18□□□□□ -0.78
MCF2L2-212ENST00000488149 NGEFQ8N5V2 710 aa10.18□□□□□ -0.78
MCF2L2-212ENST00000488149 ANO8Q9HCE9 1232 aaPredicted RBP10.17□□□□□ -0.78
MCF2L2-212ENST00000488149 ANKRD45Q5TZF3 282 aa10.17□□□□□ -0.78
MCF2L2-212ENST00000488149 A0A0U1RQG5 324 aaPredicted RBP10.17□□□□□ -0.78
MCF2L2-212ENST00000488149 NUCB2P80303 420 aa10.17□□□□□ -0.78
MCF2L2-212ENST00000488149 SAFB2Q14151 953 aaKnown RBP eCLIP10.16□□□□□ -0.78
MCF2L2-212ENST00000488149 SF3A1Q15459 793 aaKnown RBP10.16□□□□□ -0.78
MCF2L2-212ENST00000488149 REC8O95072 547 aa10.16□□□□□ -0.78
MCF2L2-212ENST00000488149 COG6Q9Y2V7 657 aa10.16□□□□□ -0.78
MCF2L2-212ENST00000488149 CHMP4CQ96CF2 233 aa10.15□□□□□ -0.78
MCF2L2-212ENST00000488149 LMOD2Q6P5Q4 547 aa10.15□□□□□ -0.78
MCF2L2-212ENST00000488149 ST20-MTHFSA0A0A6YYL1 179 aa10.15□□□□□ -0.78
MCF2L2-212ENST00000488149 DIAPH3Q9NSV4 1193 aa10.15□□□□□ -0.78
MCF2L2-212ENST00000488149 ZNF592Q92610 1267 aa10.15□□□□□ -0.78
MCF2L2-212ENST00000488149 HDGFP51858 240 aaKnown RBP10.15□□□□□ -0.79
MCF2L2-212ENST00000488149 BRPF3Q9ULD4 1205 aa10.15□□□□□ -0.79
MCF2L2-212ENST00000488149 NASPP49321 788 aaPredicted RBP10.14□□□□□ -0.79
MCF2L2-212ENST00000488149 AAMPQ13685 434 aa10.14□□□□□ -0.79
MCF2L2-212ENST00000488149 SOX12O15370 315 aa10.14□□□□□ -0.79
MCF2L2-212ENST00000488149 IL27Q8NEV9 243 aa10.14□□□□□ -0.79
MCF2L2-212ENST00000488149 DDX19BQ9UMR2 479 aa10.14□□□□□ -0.79
MCF2L2-212ENST00000488149 PANK3Q9H999 370 aa10.14□□□□□ -0.79
MCF2L2-212ENST00000488149 TERF2IPQ9NYB0 399 aa10.14□□□□□ -0.79
MCF2L2-212ENST00000488149 H3BQV1 296 aa10.14□□□□□ -0.79
MCF2L2-212ENST00000488149 IFFO2Q5TF58 517 aa10.14□□□□□ -0.79
MCF2L2-212ENST00000488149 CCAR2Q8N163 923 aaKnown RBP10.14□□□□□ -0.79
MCF2L2-212ENST00000488149 SLC4A10Q6U841 1118 aa10.13□□□□□ -0.79
MCF2L2-212ENST00000488149 CCDC39Q9UFE4 941 aa10.13□□□□□ -0.79
MCF2L2-212ENST00000488149 USP47Q96K76 1375 aa10.13□□□□□ -0.79
MCF2L2-212ENST00000488149 R3HCC1Q9Y3T6 440 aaKnown RBP10.13□□□□□ -0.79
MCF2L2-212ENST00000488149 CCDC70Q6NSX1 233 aa10.13□□□□□ -0.79
MCF2L2-212ENST00000488149 BCL2L13Q9BXK5 485 aa10.12□□□□□ -0.79
MCF2L2-212ENST00000488149 C22orf23Q9BZE7 217 aa10.12□□□□□ -0.79
MCF2L2-212ENST00000488149 TSR1Q2NL82 804 aaKnown RBP10.12□□□□□ -0.79
MCF2L2-212ENST00000488149 FOXD4L6Q3SYB3 417 aaPredicted RBP10.12□□□□□ -0.79
MCF2L2-212ENST00000488149 FOXD4L3Q6VB84 417 aaPredicted RBP10.12□□□□□ -0.79
MCF2L2-212ENST00000488149 TPM1P09493 284 aa10.12□□□□□ -0.79
MCF2L2-212ENST00000488149 STK26Q9P289 416 aa10.12□□□□□ -0.79
MCF2L2-212ENST00000488149 MROH2BQ7Z745 1585 aa10.12□□□□□ -0.79
MCF2L2-212ENST00000488149 TRAK2O60296 914 aa10.12□□□□□ -0.79
MCF2L2-212ENST00000488149 NPHP1O15259 732 aa10.11□□□□□ -0.79
MCF2L2-212ENST00000488149 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
MCF2L2-212ENST00000488149 FAM184AQ8NB25 1140 aa10.11□□□□□ -0.79
MCF2L2-212ENST00000488149 ARGLU1Q9NWB6 273 aaPredicted RBP10.11□□□□□ -0.79
MCF2L2-212ENST00000488149 CCDC18Q5T9S5 1454 aa10.11□□□□□ -0.79
MCF2L2-212ENST00000488149 RILPL2Q969X0 211 aa10.11□□□□□ -0.79
MCF2L2-212ENST00000488149 RRP7AQ9Y3A4 280 aaKnown RBP10.11□□□□□ -0.79
MCF2L2-212ENST00000488149 ISY1Q9ULR0 285 aaKnown RBP10.1□□□□□ -0.79
MCF2L2-212ENST00000488149 CCDC66A2RUB6 948 aa10.1□□□□□ -0.79
MCF2L2-212ENST00000488149 CLSTN1O94985 981 aa10.1□□□□□ -0.79
MCF2L2-212ENST00000488149 MCTP1Q6DN14 999 aa10.1□□□□□ -0.79
MCF2L2-212ENST00000488149 CNTLNQ9NXG0 1405 aa10.1□□□□□ -0.79
MCF2L2-212ENST00000488149 GORABQ5T7V8 394 aa10.1□□□□□ -0.79
MCF2L2-212ENST00000488149 PRKCSHP14314 528 aaPredicted RBP10.1□□□□□ -0.79
MCF2L2-212ENST00000488149 HMGN5P82970 282 aaKnown RBP10.1□□□□□ -0.79
MCF2L2-212ENST00000488149 HOMER1Q86YM7 354 aa10.1□□□□□ -0.79
MCF2L2-212ENST00000488149 RAPGEF2Q9Y4G8 1499 aa10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 CREBRFQ8IUR6 639 aa10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 DZIP1LQ8IYY4 767 aaKnown RBP10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 RASSF8Q8NHQ8 419 aa10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 CCDC7Q96M83 1385 aa10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 APAF1O14727 1248 aa10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 RRP9O43818 475 aaKnown RBP10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 FRAT2O75474 233 aaPredicted RBP10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 CCDC173Q0VFZ6 552 aa10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 TPD52L1Q16890 204 aaPredicted RBP10.09□□□□□ -0.79
MCF2L2-212ENST00000488149 IFT57Q9NWB7 429 aa10.08□□□□□ -0.8
MCF2L2-212ENST00000488149 RUFY2Q8WXA3 655 aa10.08□□□□□ -0.8
MCF2L2-212ENST00000488149 INTS3Q68E01 1043 aaKnown RBP10.07□□□□□ -0.8
MCF2L2-212ENST00000488149 RSPH4AQ5TD94 716 aa10.07□□□□□ -0.8
MCF2L2-212ENST00000488149 ZKSCAN1P17029 563 aaPredicted RBP10.07□□□□□ -0.8
MCF2L2-212ENST00000488149 ACBD3Q9H3P7 528 aa10.07□□□□□ -0.8
MCF2L2-212ENST00000488149 CCDC144AA2RUR9 1427 aa10.07□□□□□ -0.8
MCF2L2-212ENST00000488149 SASS6Q6UVJ0 657 aa10.07□□□□□ -0.8
MCF2L2-212ENST00000488149 CWC15Q9P013 229 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms