RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 SUPT16HQ9Y5B9 1047 aaKnown RBP20.74■□□□□ 0.91
EPHA1-205ENST00000488068 CCDC7Q96M83 1385 aa20.74■□□□□ 0.91
EPHA1-205ENST00000488068 CCDC144AA2RUR9 1427 aa20.73■□□□□ 0.91
EPHA1-205ENST00000488068 KDM5CP41229 1560 aa20.73■□□□□ 0.91
EPHA1-205ENST00000488068 CFAP74Q9C0B2 1584 aa20.72■□□□□ 0.91
EPHA1-205ENST00000488068 ADGRL1O94910 1474 aa20.72■□□□□ 0.91
EPHA1-205ENST00000488068 NPM1P06748 294 aaKnown RBP eCLIP20.72■□□□□ 0.91
EPHA1-205ENST00000488068 CNTLNQ9NXG0 1405 aa20.72■□□□□ 0.91
EPHA1-205ENST00000488068 PLA2R1Q13018 1463 aa20.71■□□□□ 0.91
EPHA1-205ENST00000488068 EIF2AK4Q9P2K8 1649 aaKnown RBP20.71■□□□□ 0.91
EPHA1-205ENST00000488068 AFAP1Q8N556 730 aa20.68■□□□□ 0.9
EPHA1-205ENST00000488068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.68■□□□□ 0.9
EPHA1-205ENST00000488068 SCAPERQ9BY12 1400 aa20.68■□□□□ 0.9
EPHA1-205ENST00000488068 USP47Q96K76 1375 aa20.67■□□□□ 0.9
EPHA1-205ENST00000488068 E9PCH4 1651 aa20.65■□□□□ 0.9
EPHA1-205ENST00000488068 C11orf95C9JLR9 678 aaPredicted RBP20.65■□□□□ 0.9
EPHA1-205ENST00000488068 TRPM1Q7Z4N2 1603 aa20.64■□□□□ 0.9
EPHA1-205ENST00000488068 TET3O43151 1660 aa20.64■□□□□ 0.89
EPHA1-205ENST00000488068 ARID4BQ4LE39 1312 aaPredicted RBP20.64■□□□□ 0.89
EPHA1-205ENST00000488068 VWDEQ8N2E2 1590 aa20.64■□□□□ 0.89
EPHA1-205ENST00000488068 BCORL1Q5H9F3 1711 aa20.63■□□□□ 0.89
EPHA1-205ENST00000488068 ZNF326Q5BKZ1 582 aaKnown RBP20.63■□□□□ 0.89
EPHA1-205ENST00000488068 KIF7Q2M1P5 1343 aa20.62■□□□□ 0.89
EPHA1-205ENST00000488068 ZNF518AQ6AHZ1 1483 aa20.62■□□□□ 0.89
EPHA1-205ENST00000488068 KIDINS220Q9ULH0 1771 aa20.62■□□□□ 0.89
EPHA1-205ENST00000488068 DCAF11Q8TEB1 546 aa20.62■□□□□ 0.89
EPHA1-205ENST00000488068 PRAG1Q86YV5 1406 aa20.62■□□□□ 0.89
EPHA1-205ENST00000488068 LAMC1P11047 1609 aa20.61■□□□□ 0.89
EPHA1-205ENST00000488068 SPHKAPQ2M3C7 1700 aa20.61■□□□□ 0.89
EPHA1-205ENST00000488068 PRDM15P57071 1507 aaPredicted RBP20.6■□□□□ 0.89
EPHA1-205ENST00000488068 A2MP01023 1474 aa20.6■□□□□ 0.89
EPHA1-205ENST00000488068 TRPM2O94759 1503 aa20.6■□□□□ 0.89
EPHA1-205ENST00000488068 DHX29Q7Z478 1369 aaKnown RBP20.6■□□□□ 0.89
EPHA1-205ENST00000488068 CD109Q6YHK3 1445 aa20.6■□□□□ 0.89
EPHA1-205ENST00000488068 KANK1Q14678 1352 aa20.58■□□□□ 0.89
EPHA1-205ENST00000488068 CEP152O94986 1710 aa20.58■□□□□ 0.89
EPHA1-205ENST00000488068 CARD11Q9BXL7 1154 aa20.58■□□□□ 0.88
EPHA1-205ENST00000488068 KDM2AQ9Y2K7 1162 aa20.57■□□□□ 0.88
EPHA1-205ENST00000488068 PTPRTO14522 1441 aa20.57■□□□□ 0.88
EPHA1-205ENST00000488068 MROH1Q8NDA8 1641 aa20.57■□□□□ 0.88
EPHA1-205ENST00000488068 TSHZ2Q9NRE2 1034 aa20.56■□□□□ 0.88
EPHA1-205ENST00000488068 POGZQ7Z3K3 1410 aa20.55■□□□□ 0.88
EPHA1-205ENST00000488068 ROCK2O75116 1388 aaKnown RBP20.55■□□□□ 0.88
EPHA1-205ENST00000488068 GPRASP1Q5JY77 1395 aa20.55■□□□□ 0.88
EPHA1-205ENST00000488068 RNF17Q9BXT8 1623 aaKnown RBP20.53■□□□□ 0.88
EPHA1-205ENST00000488068 NEO1Q92859 1461 aa20.53■□□□□ 0.88
EPHA1-205ENST00000488068 NEURL4Q96JN8 1562 aa20.53■□□□□ 0.88
EPHA1-205ENST00000488068 MLH3Q9UHC1 1453 aa20.53■□□□□ 0.88
EPHA1-205ENST00000488068 HECW2Q9P2P5 1572 aa20.52■□□□□ 0.88
EPHA1-205ENST00000488068 CLTCL1P53675 1640 aa20.5■□□□□ 0.87
EPHA1-205ENST00000488068 LMTK2Q8IWU2 1503 aa20.5■□□□□ 0.87
EPHA1-205ENST00000488068 RGL3Q3MIN7 710 aa20.49■□□□□ 0.87
EPHA1-205ENST00000488068 PRKRIP1Q9H875 184 aaPredicted RBP20.49■□□□□ 0.87
EPHA1-205ENST00000488068 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
EPHA1-205ENST00000488068 KIF3BO15066 747 aa20.49■□□□□ 0.87
EPHA1-205ENST00000488068 STAC3Q96MF2 364 aa20.48■□□□□ 0.87
EPHA1-205ENST00000488068 MAP3K4Q9Y6R4 1608 aa20.48■□□□□ 0.87
EPHA1-205ENST00000488068 EFCAB6Q5THR3 1501 aa20.47■□□□□ 0.87
EPHA1-205ENST00000488068 GLI2P10070 1586 aa20.46■□□□□ 0.87
EPHA1-205ENST00000488068 ANP32EQ9BTT0 268 aa20.46■□□□□ 0.87
EPHA1-205ENST00000488068 MADDQ8WXG6 1647 aa20.46■□□□□ 0.87
EPHA1-205ENST00000488068 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
EPHA1-205ENST00000488068 FRMPD1Q5SYB0 1578 aa20.44■□□□□ 0.86
EPHA1-205ENST00000488068 PPRC1Q5VV67 1664 aaKnown RBP20.43■□□□□ 0.86
EPHA1-205ENST00000488068 RIMBP3CA6NJZ7 1639 aa20.43■□□□□ 0.86
EPHA1-205ENST00000488068 RIMBP3BA6NNM3 1639 aa20.43■□□□□ 0.86
EPHA1-205ENST00000488068 ABCA6Q8N139 1617 aa20.43■□□□□ 0.86
EPHA1-205ENST00000488068 RIMBP3Q9UFD9 1639 aa20.43■□□□□ 0.86
EPHA1-205ENST00000488068 KIF1BO60333 1816 aa20.42■□□□□ 0.86
EPHA1-205ENST00000488068 RICTORQ6R327 1708 aa20.4■□□□□ 0.86
EPHA1-205ENST00000488068 KIAA1210Q9ULL0 1709 aa20.4■□□□□ 0.86
EPHA1-205ENST00000488068 NBPF1Q3BBV0 1214 aa20.39■□□□□ 0.85
EPHA1-205ENST00000488068 IQGAP1P46940 1657 aa20.38■□□□□ 0.85
EPHA1-205ENST00000488068 COL17A1Q9UMD9 1497 aaPredicted RBP20.37■□□□□ 0.85
EPHA1-205ENST00000488068 IFT172Q9UG01 1749 aa20.36■□□□□ 0.85
EPHA1-205ENST00000488068 DIP2CQ9Y2E4 1556 aa20.36■□□□□ 0.85
EPHA1-205ENST00000488068 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
EPHA1-205ENST00000488068 MYOM2P54296 1465 aa20.34■□□□□ 0.85
EPHA1-205ENST00000488068 KTN1Q86UP2 1357 aaKnown RBP20.34■□□□□ 0.85
EPHA1-205ENST00000488068 MRS2Q9HD23 443 aa20.32■□□□□ 0.84
EPHA1-205ENST00000488068 CYB5RLQ6IPT4 315 aa20.32■□□□□ 0.84
EPHA1-205ENST00000488068 CCDC184Q52MB2 194 aa20.31■□□□□ 0.84
EPHA1-205ENST00000488068 ABCC3O15438 1527 aa20.31■□□□□ 0.84
EPHA1-205ENST00000488068 DIP2BQ9P265 1576 aa20.31■□□□□ 0.84
EPHA1-205ENST00000488068 MROH2AA6NES4 1674 aa20.31■□□□□ 0.84
EPHA1-205ENST00000488068 ZC3H13Q5T200 1668 aaKnown RBP20.31■□□□□ 0.84
EPHA1-205ENST00000488068 TESK2Q96S53 571 aa20.3■□□□□ 0.84
EPHA1-205ENST00000488068 CAMSAP1Q5T5Y3 1602 aa20.3■□□□□ 0.84
EPHA1-205ENST00000488068 UGGT1Q9NYU2 1555 aa20.3■□□□□ 0.84
EPHA1-205ENST00000488068 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
EPHA1-205ENST00000488068 ADGRB3O60242 1522 aa20.29■□□□□ 0.84
EPHA1-205ENST00000488068 SCAF11Q99590 1463 aaKnown RBP20.28■□□□□ 0.84
EPHA1-205ENST00000488068 ZMYM4Q5VZL5 1548 aa20.28■□□□□ 0.84
EPHA1-205ENST00000488068 NPATQ14207 1427 aa20.28■□□□□ 0.84
EPHA1-205ENST00000488068 RAPGEF3O95398 923 aa20.27■□□□□ 0.84
EPHA1-205ENST00000488068 NRXN1Q9ULB1 1477 aa20.26■□□□□ 0.83
EPHA1-205ENST00000488068 TMF1P82094 1093 aa20.26■□□□□ 0.83
EPHA1-205ENST00000488068 DISP3Q9P2K9 1392 aa20.25■□□□□ 0.83
EPHA1-205ENST00000488068 BCANQ96GW7 911 aa20.24■□□□□ 0.83
EPHA1-205ENST00000488068 RALBP1Q15311 655 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms