RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 SLC34A2O95436 690 aa11.34□□□□□ -0.59
TNFSF4-203ENST00000488053 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
TNFSF4-203ENST00000488053 SNPHO15079 494 aa11.33□□□□□ -0.6
TNFSF4-203ENST00000488053 BCANQ96GW7 911 aa11.33□□□□□ -0.6
TNFSF4-203ENST00000488053 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
TNFSF4-203ENST00000488053 GAPVD1Q14C86 1478 aa11.32□□□□□ -0.6
TNFSF4-203ENST00000488053 NBR1Q14596 966 aa11.32□□□□□ -0.6
TNFSF4-203ENST00000488053 DOK7Q18PE1 504 aa11.32□□□□□ -0.6
TNFSF4-203ENST00000488053 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
TNFSF4-203ENST00000488053 TBC1D12O60347 775 aa11.3□□□□□ -0.6
TNFSF4-203ENST00000488053 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
TNFSF4-203ENST00000488053 ABCA5Q8WWZ7 1642 aa11.3□□□□□ -0.6
TNFSF4-203ENST00000488053 RIMBP2O15034 1052 aa11.29□□□□□ -0.6
TNFSF4-203ENST00000488053 UPF1Q92900 1129 aaKnown RBP eCLIP11.29□□□□□ -0.6
TNFSF4-203ENST00000488053 ABCA10Q8WWZ4 1543 aa11.29□□□□□ -0.6
TNFSF4-203ENST00000488053 DPYSL4O14531 572 aa11.28□□□□□ -0.6
TNFSF4-203ENST00000488053 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
TNFSF4-203ENST00000488053 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
TNFSF4-203ENST00000488053 SPDYE16A6NNV3 312 aaPredicted RBP11.26□□□□□ -0.61
TNFSF4-203ENST00000488053 ZSWIM6Q9HCJ5 1215 aa11.26□□□□□ -0.61
TNFSF4-203ENST00000488053 ZNF316A6NFI3 1004 aaPredicted RBP11.25□□□□□ -0.61
TNFSF4-203ENST00000488053 ZNF710Q8N1W2 664 aa11.25□□□□□ -0.61
TNFSF4-203ENST00000488053 WRNQ14191 1432 aaPredicted RBP eCLIP11.25□□□□□ -0.61
TNFSF4-203ENST00000488053 PDIA6Q15084 440 aa11.24□□□□□ -0.61
TNFSF4-203ENST00000488053 PCDHGA4Q9Y5G9 962 aa11.23□□□□□ -0.61
TNFSF4-203ENST00000488053 ADAMTS12P58397 1594 aa11.23□□□□□ -0.61
TNFSF4-203ENST00000488053 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
TNFSF4-203ENST00000488053 BIVM-ERCC5R4GMW8 1640 aa11.23□□□□□ -0.61
TNFSF4-203ENST00000488053 GRIN2AQ12879 1464 aa11.22□□□□□ -0.61
TNFSF4-203ENST00000488053 ERCC6L2Q5T890 1561 aa11.22□□□□□ -0.61
TNFSF4-203ENST00000488053 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
TNFSF4-203ENST00000488053 EVI5O60447 810 aa11.19□□□□□ -0.62
TNFSF4-203ENST00000488053 SEMA3EO15041 775 aa11.17□□□□□ -0.62
TNFSF4-203ENST00000488053 ARSIQ5FYB1 569 aa11.17□□□□□ -0.62
TNFSF4-203ENST00000488053 NUP160Q12769 1436 aa11.17□□□□□ -0.62
TNFSF4-203ENST00000488053 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
TNFSF4-203ENST00000488053 GPR153Q6NV75 609 aa11.16□□□□□ -0.62
TNFSF4-203ENST00000488053 FHAD1B1AJZ9 1412 aa11.16□□□□□ -0.62
TNFSF4-203ENST00000488053 TESPA1A2RU30 521 aaPredicted RBP11.15□□□□□ -0.62
TNFSF4-203ENST00000488053 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
TNFSF4-203ENST00000488053 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
TNFSF4-203ENST00000488053 ANO8Q9HCE9 1232 aaPredicted RBP11.14□□□□□ -0.63
TNFSF4-203ENST00000488053 SHROOM2Q13796 1616 aa11.13□□□□□ -0.63
TNFSF4-203ENST00000488053 HOXB1P14653 301 aaPredicted RBP11.13□□□□□ -0.63
TNFSF4-203ENST00000488053 PTGER2P43116 358 aa11.13□□□□□ -0.63
TNFSF4-203ENST00000488053 KDM4FA0A1W2PPD8 638 aa11.12□□□□□ -0.63
TNFSF4-203ENST00000488053 NUDT7P0C024 238 aa11.12□□□□□ -0.63
TNFSF4-203ENST00000488053 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.63
TNFSF4-203ENST00000488053 PRG4Q92954 1404 aaPredicted RBP11.09□□□□□ -0.63
TNFSF4-203ENST00000488053 MLLT3P42568 568 aaPredicted RBP11.08□□□□□ -0.64
TNFSF4-203ENST00000488053 ST18O60284 1047 aa11.07□□□□□ -0.64
TNFSF4-203ENST00000488053 DDX12PQ92771 950 aa11.07□□□□□ -0.64
TNFSF4-203ENST00000488053 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
TNFSF4-203ENST00000488053 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
TNFSF4-203ENST00000488053 GRXCR2A6NFK2 248 aa11.06□□□□□ -0.64
TNFSF4-203ENST00000488053 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
TNFSF4-203ENST00000488053 KIF13AQ9H1H9 1805 aa11.05□□□□□ -0.64
TNFSF4-203ENST00000488053 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
TNFSF4-203ENST00000488053 PHF14O94880 888 aa11.05□□□□□ -0.64
TNFSF4-203ENST00000488053 EPAS1Q99814 870 aa11.04□□□□□ -0.64
TNFSF4-203ENST00000488053 LHX6Q9UPM6 363 aa11.04□□□□□ -0.64
TNFSF4-203ENST00000488053 FOSBP53539 338 aa11.03□□□□□ -0.64
TNFSF4-203ENST00000488053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.02□□□□□ -0.65
TNFSF4-203ENST00000488053 FBXW7Q969H0 707 aa11.02□□□□□ -0.65
TNFSF4-203ENST00000488053 EMP3P54852 163 aa11.01□□□□□ -0.65
TNFSF4-203ENST00000488053 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
TNFSF4-203ENST00000488053 LMOD2Q6P5Q4 547 aa11.01□□□□□ -0.65
TNFSF4-203ENST00000488053 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
TNFSF4-203ENST00000488053 PCDHGA10Q9Y5H3 936 aa11.01□□□□□ -0.65
TNFSF4-203ENST00000488053 IGF1RP08069 1367 aa11.01□□□□□ -0.65
TNFSF4-203ENST00000488053 OSBPP22059 807 aa11□□□□□ -0.65
TNFSF4-203ENST00000488053 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
TNFSF4-203ENST00000488053 KIF27Q86VH2 1401 aa11□□□□□ -0.65
TNFSF4-203ENST00000488053 CUL7Q14999 1698 aa10.99□□□□□ -0.65
TNFSF4-203ENST00000488053 TTBK1Q5TCY1 1321 aaPredicted RBP10.99□□□□□ -0.65
TNFSF4-203ENST00000488053 ZDHHC16Q969W1 377 aa10.98□□□□□ -0.65
TNFSF4-203ENST00000488053 MARVELD3Q96A59 401 aa10.98□□□□□ -0.65
TNFSF4-203ENST00000488053 ERBB3P21860 1342 aa10.98□□□□□ -0.65
TNFSF4-203ENST00000488053 ADCY10Q96PN6 1610 aa10.98□□□□□ -0.65
TNFSF4-203ENST00000488053 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
TNFSF4-203ENST00000488053 KIAA0586Q9BVV6 1533 aa10.97□□□□□ -0.65
TNFSF4-203ENST00000488053 EN1Q05925 392 aaPredicted RBP10.96□□□□□ -0.65
TNFSF4-203ENST00000488053 RBM26Q5T8P6 1007 aaKnown RBP10.96□□□□□ -0.65
TNFSF4-203ENST00000488053 LCE2DQ5TA82 110 aaPredicted RBP10.95□□□□□ -0.66
TNFSF4-203ENST00000488053 ABCC10Q5T3U5 1492 aa10.94□□□□□ -0.66
TNFSF4-203ENST00000488053 CARMIL1Q5VZK9 1371 aa10.94□□□□□ -0.66
TNFSF4-203ENST00000488053 TSPOAP1O95153 1857 aa10.94□□□□□ -0.66
TNFSF4-203ENST00000488053 MAP3K7O43318 606 aa10.94□□□□□ -0.66
TNFSF4-203ENST00000488053 VARS2Q5ST30 1063 aaKnown RBP10.94□□□□□ -0.66
TNFSF4-203ENST00000488053 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
TNFSF4-203ENST00000488053 MAPKBP1O60336 1514 aa10.94□□□□□ -0.66
TNFSF4-203ENST00000488053 RBM33Q96EV2 1170 aaKnown RBP10.93□□□□□ -0.66
TNFSF4-203ENST00000488053 NUTM2FA1L443 756 aa10.92□□□□□ -0.66
TNFSF4-203ENST00000488053 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
TNFSF4-203ENST00000488053 GPIHBP1Q8IV16 184 aa10.92□□□□□ -0.66
TNFSF4-203ENST00000488053 FAM205CA6NFA0 338 aa10.91□□□□□ -0.66
TNFSF4-203ENST00000488053 ADAM33Q9BZ11 813 aa10.91□□□□□ -0.66
TNFSF4-203ENST00000488053 BCL2L12Q9HB09 334 aa10.91□□□□□ -0.66
TNFSF4-203ENST00000488053 PTPRGP23470 1445 aa10.91□□□□□ -0.66
TNFSF4-203ENST00000488053 IQGAP2Q13576 1575 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms