RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 PROX2Q3B8N5 592 aa8.21□□□□□ -1.1
HFM1-208ENST00000488023 NKX1-1Q15270 411 aaPredicted RBP8.2□□□□□ -1.1
HFM1-208ENST00000488023 LAPTM4BQ86VI4 370 aa8.2□□□□□ -1.1
HFM1-208ENST00000488023 DNAJC5Q9H3Z4 198 aa8.2□□□□□ -1.1
HFM1-208ENST00000488023 PPP1R3GB7ZBB8 358 aa8.19□□□□□ -1.1
HFM1-208ENST00000488023 ZFRQ96KR1 1074 aaKnown RBP8.18□□□□□ -1.1
HFM1-208ENST00000488023 PRKD2Q9BZL6 878 aa8.18□□□□□ -1.1
HFM1-208ENST00000488023 CRISPLD2Q9H0B8 497 aa8.18□□□□□ -1.1
HFM1-208ENST00000488023 EVI5O60447 810 aa8.16□□□□□ -1.1
HFM1-208ENST00000488023 COL9A1P20849 921 aa8.16□□□□□ -1.1
HFM1-208ENST00000488023 PPP1R15BQ5SWA1 713 aa8.15□□□□□ -1.1
HFM1-208ENST00000488023 RYDENQ9NUL5 291 aaKnown RBP8.15□□□□□ -1.1
HFM1-208ENST00000488023 KIAA1468Q9P260 1216 aa8.14□□□□□ -1.11
HFM1-208ENST00000488023 NCKAP5LQ9HCH0 1330 aa8.12□□□□□ -1.11
HFM1-208ENST00000488023 TSR3Q9UJK0 312 aaKnown RBP8.12□□□□□ -1.11
HFM1-208ENST00000488023 PDE4AP27815 886 aa8.11□□□□□ -1.11
HFM1-208ENST00000488023 V9GY48 417 aaPredicted RBP8.11□□□□□ -1.11
HFM1-208ENST00000488023 SEPT9Q9UHD8 586 aaPredicted RBP8.1□□□□□ -1.11
HFM1-208ENST00000488023 HPS5Q9UPZ3 1129 aa8.1□□□□□ -1.11
HFM1-208ENST00000488023 PCDHGA10Q9Y5H3 936 aa8.1□□□□□ -1.11
HFM1-208ENST00000488023 ONECUT3O60422 494 aaPredicted RBP8.08□□□□□ -1.12
HFM1-208ENST00000488023 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.08□□□□□ -1.12
HFM1-208ENST00000488023 PDZRN3Q9UPQ7 1066 aa8.08□□□□□ -1.12
HFM1-208ENST00000488023 TJAP1Q5JTD0 557 aa8.08□□□□□ -1.12
HFM1-208ENST00000488023 PPP1R18Q6NYC8 613 aa8.07□□□□□ -1.12
HFM1-208ENST00000488023 GTPBP6O43824 516 aaPredicted RBP8.06□□□□□ -1.12
HFM1-208ENST00000488023 LRCH3Q96II8 777 aa8.06□□□□□ -1.12
HFM1-208ENST00000488023 LARP6Q9BRS8 491 aaKnown RBP8.06□□□□□ -1.12
HFM1-208ENST00000488023 FAM98CQ17RN3 349 aaKnown RBP8.05□□□□□ -1.12
HFM1-208ENST00000488023 DDX27Q96GQ7 796 aaKnown RBP8.05□□□□□ -1.12
HFM1-208ENST00000488023 MAP3K9P80192 1104 aa8.03□□□□□ -1.12
HFM1-208ENST00000488023 TYW1BQ6NUM6 668 aa8.03□□□□□ -1.12
HFM1-208ENST00000488023 FBXW7Q969H0 707 aa8.03□□□□□ -1.12
HFM1-208ENST00000488023 MFSD10Q14728 455 aa8.02□□□□□ -1.13
HFM1-208ENST00000488023 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.02□□□□□ -1.13
HFM1-208ENST00000488023 TRIM6-TRIM34B2RNG4 842 aa8.01□□□□□ -1.13
HFM1-208ENST00000488023 PHF14O94880 888 aa8□□□□□ -1.13
HFM1-208ENST00000488023 EMILIN3Q9NT22 766 aa8□□□□□ -1.13
HFM1-208ENST00000488023 POTECB2RU33 542 aa7.99□□□□□ -1.13
HFM1-208ENST00000488023 PPP4CP60510 307 aa7.99□□□□□ -1.13
HFM1-208ENST00000488023 MTRQ99707 1265 aa7.99□□□□□ -1.13
HFM1-208ENST00000488023 IL21Q9HBE4 155 aa7.99□□□□□ -1.13
HFM1-208ENST00000488023 C6orf132Q5T0Z8 1188 aa7.98□□□□□ -1.13
HFM1-208ENST00000488023 LCE2AQ5TA79 106 aaPredicted RBP7.98□□□□□ -1.13
HFM1-208ENST00000488023 DCAF8L2P0C7V8 631 aa7.97□□□□□ -1.13
HFM1-208ENST00000488023 TREML4Q6UXN2 200 aa7.97□□□□□ -1.13
HFM1-208ENST00000488023 ZNF516Q92618 1163 aa7.96□□□□□ -1.13
HFM1-208ENST00000488023 MYT1Q01538 1121 aa7.95□□□□□ -1.14
HFM1-208ENST00000488023 CADPS2Q86UW7 1296 aa7.95□□□□□ -1.14
HFM1-208ENST00000488023 TRIM67Q6ZTA4 783 aa7.94□□□□□ -1.14
HFM1-208ENST00000488023 NKX2-3Q8TAU0 364 aa7.92□□□□□ -1.14
HFM1-208ENST00000488023 EPAS1Q99814 870 aa7.92□□□□□ -1.14
HFM1-208ENST00000488023 DGAT1O75907 488 aa7.91□□□□□ -1.14
HFM1-208ENST00000488023 PKDCCQ504Y2 493 aa7.91□□□□□ -1.14
HFM1-208ENST00000488023 SAMD7Q7Z3H4 446 aa7.9□□□□□ -1.14
HFM1-208ENST00000488023 TSKSQ9UJT2 592 aa7.89□□□□□ -1.15
HFM1-208ENST00000488023 CAMK2BQ13554 666 aa7.89□□□□□ -1.15
HFM1-208ENST00000488023 PACS2Q86VP3 889 aa7.89□□□□□ -1.15
HFM1-208ENST00000488023 RBM33Q96EV2 1170 aaKnown RBP7.88□□□□□ -1.15
HFM1-208ENST00000488023 GGCXP38435 758 aa7.87□□□□□ -1.15
HFM1-208ENST00000488023 DPYSL4O14531 572 aa7.86□□□□□ -1.15
HFM1-208ENST00000488023 TMUB1Q9BVT8 246 aa7.86□□□□□ -1.15
HFM1-208ENST00000488023 SMAPO00193 183 aa7.85□□□□□ -1.15
HFM1-208ENST00000488023 APLP1P51693 650 aa7.85□□□□□ -1.15
HFM1-208ENST00000488023 EMID1Q96A84 441 aaPredicted RBP7.85□□□□□ -1.15
HFM1-208ENST00000488023 STK17AQ9UEE5 414 aa7.85□□□□□ -1.15
HFM1-208ENST00000488023 SLC19A1P41440 591 aa7.83□□□□□ -1.16
HFM1-208ENST00000488023 PRR20EP86478 221 aa7.83□□□□□ -1.16
HFM1-208ENST00000488023 PRR20CP86479 221 aa7.83□□□□□ -1.16
HFM1-208ENST00000488023 PRR20DP86480 221 aa7.83□□□□□ -1.16
HFM1-208ENST00000488023 PRR20BP86481 221 aa7.83□□□□□ -1.16
HFM1-208ENST00000488023 PRR20AP86496 221 aa7.83□□□□□ -1.16
HFM1-208ENST00000488023 BBXQ8WY36 941 aaPredicted RBP7.83□□□□□ -1.16
HFM1-208ENST00000488023 DDX12PQ92771 950 aa7.83□□□□□ -1.16
HFM1-208ENST00000488023 C3orf80F5H4A9 247 aa7.81□□□□□ -1.16
HFM1-208ENST00000488023 FAM187AA6NFU0 413 aa7.8□□□□□ -1.16
HFM1-208ENST00000488023 SPRYD7Q5W111 196 aa7.8□□□□□ -1.16
HFM1-208ENST00000488023 FAM198AQ9UFP1 575 aa7.8□□□□□ -1.16
HFM1-208ENST00000488023 ST8SIA5O15466 376 aa7.79□□□□□ -1.16
HFM1-208ENST00000488023 COPS2P61201 443 aa7.79□□□□□ -1.16
HFM1-208ENST00000488023 ZNF598Q86UK7 904 aaKnown RBP7.79□□□□□ -1.16
HFM1-208ENST00000488023 WFS1O76024 890 aa7.79□□□□□ -1.16
HFM1-208ENST00000488023 TSR1Q2NL82 804 aaKnown RBP7.79□□□□□ -1.16
HFM1-208ENST00000488023 AAASQ9NRG9 546 aa7.79□□□□□ -1.16
HFM1-208ENST00000488023 EN1Q05925 392 aaPredicted RBP7.78□□□□□ -1.16
HFM1-208ENST00000488023 RNF223E7ERA6 249 aa7.77□□□□□ -1.17
HFM1-208ENST00000488023 NBR1Q14596 966 aa7.77□□□□□ -1.17
HFM1-208ENST00000488023 CDCA7LQ96GN5 454 aa7.77□□□□□ -1.17
HFM1-208ENST00000488023 WIPF1O43516 503 aa7.76□□□□□ -1.17
HFM1-208ENST00000488023 ZPR1O75312 459 aa7.76□□□□□ -1.17
HFM1-208ENST00000488023 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.76□□□□□ -1.17
HFM1-208ENST00000488023 MAP3K7O43318 606 aa7.76□□□□□ -1.17
HFM1-208ENST00000488023 GDF9O60383 454 aa7.76□□□□□ -1.17
HFM1-208ENST00000488023 RNF40O75150 1001 aa7.76□□□□□ -1.17
HFM1-208ENST00000488023 PDIA6Q15084 440 aa7.76□□□□□ -1.17
HFM1-208ENST00000488023 TATDN2Q93075 761 aa7.76□□□□□ -1.17
HFM1-208ENST00000488023 PRSS12P56730 875 aa7.75□□□□□ -1.17
HFM1-208ENST00000488023 PNMA3Q9UL41 463 aa7.75□□□□□ -1.17
HFM1-208ENST00000488023 INSM1Q01101 510 aaPredicted RBP7.74□□□□□ -1.17
HFM1-208ENST00000488023 SPDYE16A6NNV3 312 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms