RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
HMGB1P36-201ENST00000487709 PHF14O94880 888 aa10.53□□□□□ -0.72
HMGB1P36-201ENST00000487709 BCAMP50895 628 aa10.53□□□□□ -0.72
HMGB1P36-201ENST00000487709 DPYSL4O14531 572 aa10.51□□□□□ -0.73
HMGB1P36-201ENST00000487709 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
HMGB1P36-201ENST00000487709 RGS20O76081 388 aa10.49□□□□□ -0.73
HMGB1P36-201ENST00000487709 RBM33Q96EV2 1170 aaKnown RBP10.48□□□□□ -0.73
HMGB1P36-201ENST00000487709 IRX2Q9BZI1 471 aaPredicted RBP10.48□□□□□ -0.73
HMGB1P36-201ENST00000487709 SEPT9Q9UHD8 586 aaPredicted RBP10.48□□□□□ -0.73
HMGB1P36-201ENST00000487709 C6orf132Q5T0Z8 1188 aa10.47□□□□□ -0.73
HMGB1P36-201ENST00000487709 LAPTM4BQ86VI4 370 aa10.46□□□□□ -0.73
HMGB1P36-201ENST00000487709 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.73
HMGB1P36-201ENST00000487709 SOWAHBA6NEL2 793 aa10.45□□□□□ -0.74
HMGB1P36-201ENST00000487709 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
HMGB1P36-201ENST00000487709 DDX12PQ92771 950 aa10.45□□□□□ -0.74
HMGB1P36-201ENST00000487709 EPAS1Q99814 870 aa10.45□□□□□ -0.74
HMGB1P36-201ENST00000487709 WBP1LQ9NX94 342 aa10.43□□□□□ -0.74
HMGB1P36-201ENST00000487709 TRIM6-TRIM34B2RNG4 842 aa10.42□□□□□ -0.74
HMGB1P36-201ENST00000487709 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
HMGB1P36-201ENST00000487709 ONECUT3O60422 494 aaPredicted RBP10.39□□□□□ -0.75
HMGB1P36-201ENST00000487709 NBR1Q14596 966 aa10.39□□□□□ -0.75
HMGB1P36-201ENST00000487709 FAM98CQ17RN3 349 aaKnown RBP10.39□□□□□ -0.75
HMGB1P36-201ENST00000487709 NYAP1Q6ZVC0 841 aa10.38□□□□□ -0.75
HMGB1P36-201ENST00000487709 HPS5Q9UPZ3 1129 aa10.38□□□□□ -0.75
HMGB1P36-201ENST00000487709 MAP3K7O43318 606 aa10.37□□□□□ -0.75
HMGB1P36-201ENST00000487709 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
HMGB1P36-201ENST00000487709 LRCH3Q96II8 777 aa10.37□□□□□ -0.75
HMGB1P36-201ENST00000487709 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.37□□□□□ -0.75
HMGB1P36-201ENST00000487709 KCNC4Q03721 635 aa10.36□□□□□ -0.75
HMGB1P36-201ENST00000487709 EN1Q05925 392 aaPredicted RBP10.35□□□□□ -0.75
HMGB1P36-201ENST00000487709 TSR3Q9UJK0 312 aaKnown RBP10.35□□□□□ -0.75
HMGB1P36-201ENST00000487709 TSKSQ9UJT2 592 aa10.34□□□□□ -0.75
HMGB1P36-201ENST00000487709 PDIA6Q15084 440 aa10.32□□□□□ -0.76
HMGB1P36-201ENST00000487709 PACS2Q86VP3 889 aa10.32□□□□□ -0.76
HMGB1P36-201ENST00000487709 BBXQ8WY36 941 aaPredicted RBP10.32□□□□□ -0.76
HMGB1P36-201ENST00000487709 SMAPO00193 183 aa10.3□□□□□ -0.76
HMGB1P36-201ENST00000487709 Q6ZNB5 142 aa10.28□□□□□ -0.76
HMGB1P36-201ENST00000487709 PPP4CP60510 307 aa10.27□□□□□ -0.77
HMGB1P36-201ENST00000487709 CDCA7LQ96GN5 454 aa10.27□□□□□ -0.77
HMGB1P36-201ENST00000487709 GRXCR2A6NFK2 248 aa10.26□□□□□ -0.77
HMGB1P36-201ENST00000487709 SPDYE16A6NNV3 312 aaPredicted RBP10.26□□□□□ -0.77
HMGB1P36-201ENST00000487709 SAMD7Q7Z3H4 446 aa10.26□□□□□ -0.77
HMGB1P36-201ENST00000487709 PRIM1P49642 420 aaKnown RBP10.25□□□□□ -0.77
HMGB1P36-201ENST00000487709 FAM198AQ9UFP1 575 aa10.25□□□□□ -0.77
HMGB1P36-201ENST00000487709 PRSS12P56730 875 aa10.24□□□□□ -0.77
HMGB1P36-201ENST00000487709 SPRYD3Q8NCJ5 442 aa10.24□□□□□ -0.77
HMGB1P36-201ENST00000487709 E2F4Q16254 413 aa10.23□□□□□ -0.77
HMGB1P36-201ENST00000487709 C3orf80F5H4A9 247 aa10.22□□□□□ -0.77
HMGB1P36-201ENST00000487709 PNMA3Q9UL41 463 aa10.22□□□□□ -0.77
HMGB1P36-201ENST00000487709 NBPF26B4DH59 902 aa10.21□□□□□ -0.77
HMGB1P36-201ENST00000487709 RNF40O75150 1001 aa10.21□□□□□ -0.77
HMGB1P36-201ENST00000487709 CDHR5Q9HBB8 845 aa10.21□□□□□ -0.77
HMGB1P36-201ENST00000487709 CERKQ8TCT0 537 aa10.2□□□□□ -0.78
HMGB1P36-201ENST00000487709 TATDN2Q93075 761 aa10.2□□□□□ -0.78
HMGB1P36-201ENST00000487709 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.2□□□□□ -0.78
HMGB1P36-201ENST00000487709 TJAP1Q5JTD0 557 aa10.19□□□□□ -0.78
HMGB1P36-201ENST00000487709 WDR70Q9NW82 654 aa10.19□□□□□ -0.78
HMGB1P36-201ENST00000487709 MTRQ99707 1265 aa10.18□□□□□ -0.78
HMGB1P36-201ENST00000487709 NUDT18Q6ZVK8 323 aa10.17□□□□□ -0.78
HMGB1P36-201ENST00000487709 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
HMGB1P36-201ENST00000487709 OSBPP22059 807 aa10.15□□□□□ -0.78
HMGB1P36-201ENST00000487709 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P36-201ENST00000487709 IL21Q9HBE4 155 aa10.15□□□□□ -0.78
HMGB1P36-201ENST00000487709 GFRA3O60609 400 aa10.14□□□□□ -0.79
HMGB1P36-201ENST00000487709 PRKD2Q9BZL6 878 aa10.14□□□□□ -0.79
HMGB1P36-201ENST00000487709 LAPTM4AQ15012 233 aa10.13□□□□□ -0.79
HMGB1P36-201ENST00000487709 ZNF516Q92618 1163 aa10.13□□□□□ -0.79
HMGB1P36-201ENST00000487709 ARIH1Q9Y4X5 557 aaPredicted RBP10.13□□□□□ -0.79
HMGB1P36-201ENST00000487709 APLP1P51693 650 aa10.12□□□□□ -0.79
HMGB1P36-201ENST00000487709 HDGFP51858 240 aaKnown RBP10.12□□□□□ -0.79
HMGB1P36-201ENST00000487709 PPP1R18Q6NYC8 613 aa10.12□□□□□ -0.79
HMGB1P36-201ENST00000487709 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
HMGB1P36-201ENST00000487709 RBM27Q9P2N5 1060 aaKnown RBP10.1□□□□□ -0.79
HMGB1P36-201ENST00000487709 LCE2BO14633 110 aa10.09□□□□□ -0.79
HMGB1P36-201ENST00000487709 SWT1Q5T5J6 900 aaKnown RBP10.09□□□□□ -0.79
HMGB1P36-201ENST00000487709 COPS2P61201 443 aa10.08□□□□□ -0.8
HMGB1P36-201ENST00000487709 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
HMGB1P36-201ENST00000487709 NKX2-3Q8TAU0 364 aa10.07□□□□□ -0.8
HMGB1P36-201ENST00000487709 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
HMGB1P36-201ENST00000487709 TTC13Q8NBP0 860 aa10.05□□□□□ -0.8
HMGB1P36-201ENST00000487709 NPDC1Q9NQX5 325 aaPredicted RBP10.05□□□□□ -0.8
HMGB1P36-201ENST00000487709 NRG2O14511 850 aaPredicted RBP10.04□□□□□ -0.8
HMGB1P36-201ENST00000487709 SLF2Q8IX21 1173 aa10.04□□□□□ -0.8
HMGB1P36-201ENST00000487709 V9GY48 417 aaPredicted RBP10.04□□□□□ -0.8
HMGB1P36-201ENST00000487709 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
HMGB1P36-201ENST00000487709 AMER1Q5JTC6 1135 aaPredicted RBP10.01□□□□□ -0.81
HMGB1P36-201ENST00000487709 GGCXP38435 758 aa10□□□□□ -0.81
HMGB1P36-201ENST00000487709 SLC4A3P48751 1232 aa10□□□□□ -0.81
HMGB1P36-201ENST00000487709 PDZRN3Q9UPQ7 1066 aa9.99□□□□□ -0.81
HMGB1P36-201ENST00000487709 MLLT3P42568 568 aaPredicted RBP9.98□□□□□ -0.81
HMGB1P36-201ENST00000487709 EYA1Q99502 592 aa9.98□□□□□ -0.81
HMGB1P36-201ENST00000487709 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
HMGB1P36-201ENST00000487709 ZPR1O75312 459 aa9.97□□□□□ -0.81
HMGB1P36-201ENST00000487709 PCDHB3Q9Y5E6 796 aa9.97□□□□□ -0.81
HMGB1P36-201ENST00000487709 BLOC1S3Q6QNY0 202 aa9.94□□□□□ -0.82
HMGB1P36-201ENST00000487709 PRR14Q9BWN1 585 aa9.94□□□□□ -0.82
HMGB1P36-201ENST00000487709 TLL1O43897 1013 aa9.93□□□□□ -0.82
HMGB1P36-201ENST00000487709 TMUB1Q9BVT8 246 aa9.92□□□□□ -0.82
HMGB1P36-201ENST00000487709 DNAJB2P25686 324 aa9.91□□□□□ -0.82
HMGB1P36-201ENST00000487709 KCNV2Q8TDN2 545 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms