RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 TSR3Q9UJK0 312 aaKnown RBP10.64□□□□□ -0.71
USP9X-208ENST00000487625 PDZRN3Q9UPQ7 1066 aa10.63□□□□□ -0.71
USP9X-208ENST00000487625 HPS5Q9UPZ3 1129 aa10.63□□□□□ -0.71
USP9X-208ENST00000487625 RGL2O15211 777 aa10.62□□□□□ -0.71
USP9X-208ENST00000487625 PPP1R15BQ5SWA1 713 aa10.62□□□□□ -0.71
USP9X-208ENST00000487625 CRISPLD2Q9H0B8 497 aa10.61□□□□□ -0.71
USP9X-208ENST00000487625 ECM2O94769 699 aaPredicted RBP10.6□□□□□ -0.71
USP9X-208ENST00000487625 TJAP1Q5JTD0 557 aa10.6□□□□□ -0.71
USP9X-208ENST00000487625 PCDHGA10Q9Y5H3 936 aa10.6□□□□□ -0.71
USP9X-208ENST00000487625 PPP1R18Q6NYC8 613 aa10.59□□□□□ -0.71
USP9X-208ENST00000487625 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.59□□□□□ -0.71
USP9X-208ENST00000487625 LRCH3Q96II8 777 aa10.56□□□□□ -0.72
USP9X-208ENST00000487625 POTECB2RU33 542 aa10.55□□□□□ -0.72
USP9X-208ENST00000487625 ONECUT3O60422 494 aaPredicted RBP10.55□□□□□ -0.72
USP9X-208ENST00000487625 FAM98CQ17RN3 349 aaKnown RBP10.55□□□□□ -0.72
USP9X-208ENST00000487625 LCE2AQ5TA79 106 aaPredicted RBP10.55□□□□□ -0.72
USP9X-208ENST00000487625 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.51□□□□□ -0.73
USP9X-208ENST00000487625 MTRQ99707 1265 aa10.5□□□□□ -0.73
USP9X-208ENST00000487625 TRIM6-TRIM34B2RNG4 842 aa10.49□□□□□ -0.73
USP9X-208ENST00000487625 TYW1BQ6NUM6 668 aa10.49□□□□□ -0.73
USP9X-208ENST00000487625 TREML4Q6UXN2 200 aa10.49□□□□□ -0.73
USP9X-208ENST00000487625 FBXW7Q969H0 707 aa10.49□□□□□ -0.73
USP9X-208ENST00000487625 NCKAP5LQ9HCH0 1330 aa10.49□□□□□ -0.73
USP9X-208ENST00000487625 MYT1Q01538 1121 aa10.47□□□□□ -0.73
USP9X-208ENST00000487625 TRIM67Q6ZTA4 783 aa10.47□□□□□ -0.73
USP9X-208ENST00000487625 IL21Q9HBE4 155 aa10.47□□□□□ -0.73
USP9X-208ENST00000487625 PPP4CP60510 307 aa10.46□□□□□ -0.73
USP9X-208ENST00000487625 LOC100996750A0A140TA64 210 aa10.45□□□□□ -0.74
USP9X-208ENST00000487625 PHF14O94880 888 aa10.45□□□□□ -0.74
USP9X-208ENST00000487625 MAP3K9P80192 1104 aa10.45□□□□□ -0.74
USP9X-208ENST00000487625 ZNF516Q92618 1163 aa10.45□□□□□ -0.74
USP9X-208ENST00000487625 KRTAP4-6Q9BYQ5 205 aa10.45□□□□□ -0.74
USP9X-208ENST00000487625 PKD2Q13563 968 aa10.43□□□□□ -0.74
USP9X-208ENST00000487625 C6orf132Q5T0Z8 1188 aa10.43□□□□□ -0.74
USP9X-208ENST00000487625 NKX2-3Q8TAU0 364 aa10.4□□□□□ -0.74
USP9X-208ENST00000487625 EMILIN3Q9NT22 766 aa10.4□□□□□ -0.74
USP9X-208ENST00000487625 PKDCCQ504Y2 493 aa10.39□□□□□ -0.75
USP9X-208ENST00000487625 PDE4AP27815 886 aa10.38□□□□□ -0.75
USP9X-208ENST00000487625 HS6ST3Q8IZP7 471 aa10.38□□□□□ -0.75
USP9X-208ENST00000487625 DGAT1O75907 488 aa10.37□□□□□ -0.75
USP9X-208ENST00000487625 SAMD7Q7Z3H4 446 aa10.36□□□□□ -0.75
USP9X-208ENST00000487625 STK17AQ9UEE5 414 aa10.35□□□□□ -0.75
USP9X-208ENST00000487625 TSKSQ9UJT2 592 aa10.35□□□□□ -0.75
USP9X-208ENST00000487625 EMID1Q96A84 441 aaPredicted RBP10.33□□□□□ -0.76
USP9X-208ENST00000487625 DDX27Q96GQ7 796 aaKnown RBP10.33□□□□□ -0.76
USP9X-208ENST00000487625 GGCXP38435 758 aa10.31□□□□□ -0.76
USP9X-208ENST00000487625 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
USP9X-208ENST00000487625 EPAS1Q99814 870 aa10.31□□□□□ -0.76
USP9X-208ENST00000487625 LARP6Q9BRS8 491 aaKnown RBP10.31□□□□□ -0.76
USP9X-208ENST00000487625 APLP1P51693 650 aa10.3□□□□□ -0.76
USP9X-208ENST00000487625 SMAPO00193 183 aa10.29□□□□□ -0.76
USP9X-208ENST00000487625 PRR20EP86478 221 aa10.29□□□□□ -0.76
USP9X-208ENST00000487625 PRR20CP86479 221 aa10.29□□□□□ -0.76
USP9X-208ENST00000487625 PRR20DP86480 221 aa10.29□□□□□ -0.76
USP9X-208ENST00000487625 PRR20BP86481 221 aa10.29□□□□□ -0.76
USP9X-208ENST00000487625 PRR20AP86496 221 aa10.29□□□□□ -0.76
USP9X-208ENST00000487625 MFSD10Q14728 455 aa10.29□□□□□ -0.76
USP9X-208ENST00000487625 PACS2Q86VP3 889 aa10.29□□□□□ -0.76
USP9X-208ENST00000487625 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
USP9X-208ENST00000487625 TMUB1Q9BVT8 246 aa10.29□□□□□ -0.76
USP9X-208ENST00000487625 ST8SIA5O15466 376 aa10.28□□□□□ -0.76
USP9X-208ENST00000487625 SLC19A1P41440 591 aa10.27□□□□□ -0.77
USP9X-208ENST00000487625 FAM187AA6NFU0 413 aa10.26□□□□□ -0.77
USP9X-208ENST00000487625 WFS1O76024 890 aa10.26□□□□□ -0.77
USP9X-208ENST00000487625 AAASQ9NRG9 546 aa10.25□□□□□ -0.77
USP9X-208ENST00000487625 C3orf80F5H4A9 247 aa10.24□□□□□ -0.77
USP9X-208ENST00000487625 SPRYD7Q5W111 196 aa10.24□□□□□ -0.77
USP9X-208ENST00000487625 WIPF1O43516 503 aa10.23□□□□□ -0.77
USP9X-208ENST00000487625 COPS2P61201 443 aa10.22□□□□□ -0.77
USP9X-208ENST00000487625 ZNF598Q86UK7 904 aaKnown RBP10.22□□□□□ -0.77
USP9X-208ENST00000487625 FAM198AQ9UFP1 575 aa10.22□□□□□ -0.77
USP9X-208ENST00000487625 RNF223E7ERA6 249 aa10.21□□□□□ -0.77
USP9X-208ENST00000487625 TSR1Q2NL82 804 aaKnown RBP10.21□□□□□ -0.77
USP9X-208ENST00000487625 NFX1Q12986 1120 aaKnown RBP10.2□□□□□ -0.78
USP9X-208ENST00000487625 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
USP9X-208ENST00000487625 TNFRSF10AO00220 468 aa10.19□□□□□ -0.78
USP9X-208ENST00000487625 GDF9O60383 454 aa10.19□□□□□ -0.78
USP9X-208ENST00000487625 INSM1Q01101 510 aaPredicted RBP10.19□□□□□ -0.78
USP9X-208ENST00000487625 RNF40O75150 1001 aa10.18□□□□□ -0.78
USP9X-208ENST00000487625 RYDENQ9NUL5 291 aaKnown RBP10.18□□□□□ -0.78
USP9X-208ENST00000487625 ZPR1O75312 459 aa10.17□□□□□ -0.78
USP9X-208ENST00000487625 CDCA7LQ96GN5 454 aa10.17□□□□□ -0.78
USP9X-208ENST00000487625 CHGAP10645 457 aaKnown RBP10.16□□□□□ -0.78
USP9X-208ENST00000487625 EN1Q05925 392 aaPredicted RBP10.16□□□□□ -0.78
USP9X-208ENST00000487625 LCE2CQ5TA81 110 aa10.16□□□□□ -0.78
USP9X-208ENST00000487625 ZNF697Q5TEC3 545 aa10.16□□□□□ -0.78
USP9X-208ENST00000487625 DDX12PQ92771 950 aa10.16□□□□□ -0.78
USP9X-208ENST00000487625 DACH1Q9UI36 760 aa10.15□□□□□ -0.78
USP9X-208ENST00000487625 LIAT1Q6ZQX7 453 aa10.14□□□□□ -0.79
USP9X-208ENST00000487625 TATDN2Q93075 761 aa10.14□□□□□ -0.79
USP9X-208ENST00000487625 PNMA3Q9UL41 463 aa10.13□□□□□ -0.79
USP9X-208ENST00000487625 DPYSL4O14531 572 aa10.12□□□□□ -0.79
USP9X-208ENST00000487625 MAP3K7O43318 606 aa10.12□□□□□ -0.79
USP9X-208ENST00000487625 PRSS12P56730 875 aa10.12□□□□□ -0.79
USP9X-208ENST00000487625 NBPF26B4DH59 902 aa10.11□□□□□ -0.79
USP9X-208ENST00000487625 GMPR2Q9P2T1 348 aaKnown RBP10.11□□□□□ -0.79
USP9X-208ENST00000487625 NBR1Q14596 966 aa10.1□□□□□ -0.79
USP9X-208ENST00000487625 CRIPAKQ8N1N5 446 aa10.1□□□□□ -0.79
USP9X-208ENST00000487625 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
USP9X-208ENST00000487625 PPEF1O14829 653 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms