RNA–Protein interactions for RNA: ENST00000487596.1

RAD50-207, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 3

Gene RAD50, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-207ENST00000487596 PPP1R3GB7ZBB8 358 aa12.27□□□□□ -0.45
RAD50-207ENST00000487596 HCSTQ9UBK5 93 aa12.25□□□□□ -0.45
RAD50-207ENST00000487596 BHMG1C9JSJ3 638 aaPredicted RBP12.22□□□□□ -0.45
RAD50-207ENST00000487596 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
RAD50-207ENST00000487596 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
RAD50-207ENST00000487596 C6orf132Q5T0Z8 1188 aa12.21□□□□□ -0.45
RAD50-207ENST00000487596 DDX12PQ92771 950 aa12.21□□□□□ -0.45
RAD50-207ENST00000487596 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
RAD50-207ENST00000487596 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
RAD50-207ENST00000487596 RABGEF1Q9UJ41 708 aa12.18□□□□□ -0.46
RAD50-207ENST00000487596 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
RAD50-207ENST00000487596 NBR1Q14596 966 aa12.17□□□□□ -0.46
RAD50-207ENST00000487596 COL9A1P20849 921 aa12.16□□□□□ -0.46
RAD50-207ENST00000487596 GOLGA8CPA6NN73 597 aa12.15□□□□□ -0.46
RAD50-207ENST00000487596 PLCB2Q00722 1185 aa12.15□□□□□ -0.46
RAD50-207ENST00000487596 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
RAD50-207ENST00000487596 KCTD12Q96CX2 325 aaKnown RBP12.15□□□□□ -0.46
RAD50-207ENST00000487596 MAP3K7O43318 606 aa12.13□□□□□ -0.47
RAD50-207ENST00000487596 LAPTM4BQ86VI4 370 aa12.13□□□□□ -0.47
RAD50-207ENST00000487596 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
RAD50-207ENST00000487596 RBM33Q96EV2 1170 aaKnown RBP12.13□□□□□ -0.47
RAD50-207ENST00000487596 PROX2Q3B8N5 592 aa12.11□□□□□ -0.47
RAD50-207ENST00000487596 P3H3Q8IVL6 736 aa12.1□□□□□ -0.47
RAD50-207ENST00000487596 GRXCR2A6NFK2 248 aa12.09□□□□□ -0.47
RAD50-207ENST00000487596 TRIM6-TRIM34B2RNG4 842 aa12.08□□□□□ -0.48
RAD50-207ENST00000487596 WNT2BQ93097 391 aa12.08□□□□□ -0.48
RAD50-207ENST00000487596 KIAA1468Q9P260 1216 aa12.08□□□□□ -0.48
RAD50-207ENST00000487596 THSD4Q6ZMP0 1018 aa12.07□□□□□ -0.48
RAD50-207ENST00000487596 OSBPP22059 807 aa12.05□□□□□ -0.48
RAD50-207ENST00000487596 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
RAD50-207ENST00000487596 PACS2Q86VP3 889 aa12.05□□□□□ -0.48
RAD50-207ENST00000487596 ANKK1Q8NFD2 765 aa12.05□□□□□ -0.48
RAD50-207ENST00000487596 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
RAD50-207ENST00000487596 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.49
RAD50-207ENST00000487596 PTPN5P54829 565 aa12.01□□□□□ -0.49
RAD50-207ENST00000487596 PRSS12P56730 875 aa12.01□□□□□ -0.49
RAD50-207ENST00000487596 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
RAD50-207ENST00000487596 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
RAD50-207ENST00000487596 CDCA7LQ96GN5 454 aa11.99□□□□□ -0.49
RAD50-207ENST00000487596 ZFRQ96KR1 1074 aaKnown RBP11.99□□□□□ -0.49
RAD50-207ENST00000487596 SOWAHBA6NEL2 793 aa11.97□□□□□ -0.49
RAD50-207ENST00000487596 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
RAD50-207ENST00000487596 NYAP1Q6ZVC0 841 aa11.97□□□□□ -0.49
RAD50-207ENST00000487596 TSKSQ9UJT2 592 aa11.97□□□□□ -0.49
RAD50-207ENST00000487596 SEPT9Q9UHD8 586 aaPredicted RBP11.95□□□□□ -0.5
RAD50-207ENST00000487596 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
RAD50-207ENST00000487596 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
RAD50-207ENST00000487596 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
RAD50-207ENST00000487596 MLLT3P42568 568 aaPredicted RBP11.9□□□□□ -0.5
RAD50-207ENST00000487596 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
RAD50-207ENST00000487596 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.9□□□□□ -0.5
RAD50-207ENST00000487596 SLC24A1O60721 1099 aa11.89□□□□□ -0.51
RAD50-207ENST00000487596 BCAMP50895 628 aa11.89□□□□□ -0.51
RAD50-207ENST00000487596 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
RAD50-207ENST00000487596 TATDN2Q93075 761 aa11.89□□□□□ -0.51
RAD50-207ENST00000487596 NPDC1Q9NQX5 325 aaPredicted RBP11.89□□□□□ -0.51
RAD50-207ENST00000487596 TTC13Q8NBP0 860 aa11.88□□□□□ -0.51
RAD50-207ENST00000487596 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
RAD50-207ENST00000487596 TSR3Q9UJK0 312 aaKnown RBP11.87□□□□□ -0.51
RAD50-207ENST00000487596 PNMA3Q9UL41 463 aa11.87□□□□□ -0.51
RAD50-207ENST00000487596 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
RAD50-207ENST00000487596 SMYD5Q6GMV2 418 aa11.85□□□□□ -0.51
RAD50-207ENST00000487596 PTGDRQ13258 359 aa11.83□□□□□ -0.52
RAD50-207ENST00000487596 NUDT18Q6ZVK8 323 aa11.83□□□□□ -0.52
RAD50-207ENST00000487596 SEMA3EO15041 775 aa11.82□□□□□ -0.52
RAD50-207ENST00000487596 ITGBL1O95965 494 aaPredicted RBP11.82□□□□□ -0.52
RAD50-207ENST00000487596 PADI6Q6TGC4 694 aa11.82□□□□□ -0.52
RAD50-207ENST00000487596 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
RAD50-207ENST00000487596 WBP1LQ9NX94 342 aa11.82□□□□□ -0.52
RAD50-207ENST00000487596 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
RAD50-207ENST00000487596 PPP4CP60510 307 aa11.81□□□□□ -0.52
RAD50-207ENST00000487596 TESPA1A2RU30 521 aaPredicted RBP11.8□□□□□ -0.52
RAD50-207ENST00000487596 SMAPO00193 183 aa11.8□□□□□ -0.52
RAD50-207ENST00000487596 SAMD7Q7Z3H4 446 aa11.8□□□□□ -0.52
RAD50-207ENST00000487596 VSIG10Q8N0Z9 540 aa11.8□□□□□ -0.52
RAD50-207ENST00000487596 NUTM2FA1L443 756 aa11.79□□□□□ -0.52
RAD50-207ENST00000487596 RGS20O76081 388 aa11.79□□□□□ -0.52
RAD50-207ENST00000487596 FCHSD2O94868 740 aa11.78□□□□□ -0.52
RAD50-207ENST00000487596 SLC4A3P48751 1232 aa11.78□□□□□ -0.52
RAD50-207ENST00000487596 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
RAD50-207ENST00000487596 EYA1Q99502 592 aa11.75□□□□□ -0.53
RAD50-207ENST00000487596 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
RAD50-207ENST00000487596 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
RAD50-207ENST00000487596 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
RAD50-207ENST00000487596 A0A0G2JS52 829 aa11.73□□□□□ -0.53
RAD50-207ENST00000487596 KCNC4Q03721 635 aa11.73□□□□□ -0.53
RAD50-207ENST00000487596 HIC1Q14526 733 aa11.71□□□□□ -0.53
RAD50-207ENST00000487596 DNAJB2P25686 324 aa11.7□□□□□ -0.54
RAD50-207ENST00000487596 ADGRG1Q9Y653 693 aa11.7□□□□□ -0.54
RAD50-207ENST00000487596 SWT1Q5T5J6 900 aaKnown RBP11.68□□□□□ -0.54
RAD50-207ENST00000487596 PRR14Q9BWN1 585 aa11.68□□□□□ -0.54
RAD50-207ENST00000487596 RNF40O75150 1001 aa11.67□□□□□ -0.54
RAD50-207ENST00000487596 OATP04181 439 aa11.67□□□□□ -0.54
RAD50-207ENST00000487596 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
RAD50-207ENST00000487596 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
RAD50-207ENST00000487596 TMEM134Q9H6X4 195 aa11.65□□□□□ -0.54
RAD50-207ENST00000487596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.64□□□□□ -0.55
RAD50-207ENST00000487596 GNPATO15228 680 aa11.63□□□□□ -0.55
RAD50-207ENST00000487596 IL21Q9HBE4 155 aa11.63□□□□□ -0.55
RAD50-207ENST00000487596 TJAP1Q5JTD0 557 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms