RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 ABCC1P33527 1531 aa16.26■□□□□ 0.19
CDK11A-217ENST00000487462 RANGAP1P46060 587 aaPredicted RBP16.26■□□□□ 0.19
CDK11A-217ENST00000487462 PTPRKQ15262 1439 aa16.26■□□□□ 0.19
CDK11A-217ENST00000487462 SRCAPQ6ZRS2 3230 aa16.25■□□□□ 0.19
CDK11A-217ENST00000487462 DNMT1P26358 1616 aaKnown RBP16.24■□□□□ 0.19
CDK11A-217ENST00000487462 VWDEQ8N2E2 1590 aa16.24■□□□□ 0.19
CDK11A-217ENST00000487462 SETD1AO15047 1707 aaKnown RBP16.22■□□□□ 0.19
CDK11A-217ENST00000487462 PREX2Q70Z35 1606 aa16.2■□□□□ 0.18
CDK11A-217ENST00000487462 A2ML1A8K2U0 1454 aa16.2■□□□□ 0.18
CDK11A-217ENST00000487462 TROQ12816 1431 aaPredicted RBP16.18■□□□□ 0.18
CDK11A-217ENST00000487462 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
CDK11A-217ENST00000487462 RNF17Q9BXT8 1623 aaKnown RBP16.17■□□□□ 0.18
CDK11A-217ENST00000487462 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
CDK11A-217ENST00000487462 SAMD9LQ8IVG5 1584 aa16.17■□□□□ 0.18
CDK11A-217ENST00000487462 POTEAQ6S8J7 498 aa16.16■□□□□ 0.18
CDK11A-217ENST00000487462 LRRIQ1Q96JM4 1722 aa16.15■□□□□ 0.18
CDK11A-217ENST00000487462 LRRC7Q96NW7 1537 aa16.12■□□□□ 0.17
CDK11A-217ENST00000487462 DSG3P32926 999 aa16.11■□□□□ 0.17
CDK11A-217ENST00000487462 SYNMO15061 1565 aa16.11■□□□□ 0.17
CDK11A-217ENST00000487462 CDC42BPAQ5VT25 1732 aa16.11■□□□□ 0.17
CDK11A-217ENST00000487462 CLIP1P30622 1438 aa16.11■□□□□ 0.17
CDK11A-217ENST00000487462 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
CDK11A-217ENST00000487462 DEPDC5O75140 1603 aa16.09■□□□□ 0.17
CDK11A-217ENST00000487462 MED14O60244 1454 aa16.09■□□□□ 0.17
CDK11A-217ENST00000487462 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
CDK11A-217ENST00000487462 IQGAP1P46940 1657 aa16.08■□□□□ 0.17
CDK11A-217ENST00000487462 ABCB7O75027 752 aa16.08■□□□□ 0.16
CDK11A-217ENST00000487462 ATP7AQ04656 1500 aa16.08■□□□□ 0.16
CDK11A-217ENST00000487462 SYCP2Q9BX26 1530 aa16.06■□□□□ 0.16
CDK11A-217ENST00000487462 NPHP4O75161 1426 aaPredicted RBP16.06■□□□□ 0.16
CDK11A-217ENST00000487462 POLA2Q14181 598 aa16.06■□□□□ 0.16
CDK11A-217ENST00000487462 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
CDK11A-217ENST00000487462 A2MP01023 1474 aa16.05■□□□□ 0.16
CDK11A-217ENST00000487462 FMN1Q68DA7 1419 aa16.05■□□□□ 0.16
CDK11A-217ENST00000487462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK11A-217ENST00000487462 XIRP1Q702N8 1843 aaKnown RBP16.04■□□□□ 0.16
CDK11A-217ENST00000487462 TNRQ92752 1358 aa16.02■□□□□ 0.16
CDK11A-217ENST00000487462 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.16
CDK11A-217ENST00000487462 GGT6Q6P531 493 aa16.02■□□□□ 0.16
CDK11A-217ENST00000487462 ANKLE2Q86XL3 938 aa16.02■□□□□ 0.16
CDK11A-217ENST00000487462 ADGBQ8N7X0 1667 aa16.01■□□□□ 0.15
CDK11A-217ENST00000487462 ZC3H13Q5T200 1668 aaKnown RBP15.99■□□□□ 0.15
CDK11A-217ENST00000487462 PZPP20742 1482 aa15.98■□□□□ 0.15
CDK11A-217ENST00000487462 FBXO31Q5XUX0 539 aaPredicted RBP15.98■□□□□ 0.15
CDK11A-217ENST00000487462 UPF1Q92900 1129 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDK11A-217ENST00000487462 UGGT1Q9NYU2 1555 aa15.98■□□□□ 0.15
CDK11A-217ENST00000487462 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
CDK11A-217ENST00000487462 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
CDK11A-217ENST00000487462 NLRP1Q9C000 1473 aa15.95■□□□□ 0.14
CDK11A-217ENST00000487462 FAM135BQ49AJ0 1406 aa15.94■□□□□ 0.14
CDK11A-217ENST00000487462 FAM135AQ9P2D6 1515 aa15.94■□□□□ 0.14
CDK11A-217ENST00000487462 HNRNPMP52272 730 aaKnown RBP eCLIP15.94■□□□□ 0.14
CDK11A-217ENST00000487462 THEMISQ8N1K5 641 aaPredicted RBP15.94■□□□□ 0.14
CDK11A-217ENST00000487462 ROBO1Q9Y6N7 1651 aa15.93■□□□□ 0.14
CDK11A-217ENST00000487462 KDM5DQ9BY66 1539 aa15.93■□□□□ 0.14
CDK11A-217ENST00000487462 ZNF777Q9ULD5 760 aaPredicted RBP15.92■□□□□ 0.14
CDK11A-217ENST00000487462 EEA1Q15075 1411 aa15.92■□□□□ 0.14
CDK11A-217ENST00000487462 MIA2Q96PC5 1412 aa15.92■□□□□ 0.14
CDK11A-217ENST00000487462 KIAA1107Q9UPP5 1409 aa15.92■□□□□ 0.14
CDK11A-217ENST00000487462 GPATCH8Q9UKJ3 1502 aaKnown RBP15.91■□□□□ 0.14
CDK11A-217ENST00000487462 CCDC18Q5T9S5 1454 aa15.89■□□□□ 0.13
CDK11A-217ENST00000487462 PLEKHH2Q8IVE3 1493 aa15.87■□□□□ 0.13
CDK11A-217ENST00000487462 PHLPP1O60346 1717 aa15.84■□□□□ 0.13
CDK11A-217ENST00000487462 UBR1Q8IWV7 1749 aa15.84■□□□□ 0.13
CDK11A-217ENST00000487462 DHX29Q7Z478 1369 aaKnown RBP15.83■□□□□ 0.12
CDK11A-217ENST00000487462 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
CDK11A-217ENST00000487462 SCAF11Q99590 1463 aaKnown RBP15.82■□□□□ 0.12
CDK11A-217ENST00000487462 MAP3K1Q13233 1512 aa15.82■□□□□ 0.12
CDK11A-217ENST00000487462 LRP6O75581 1613 aa15.82■□□□□ 0.12
CDK11A-217ENST00000487462 TRIM52Q96A61 297 aa15.81■□□□□ 0.12
CDK11A-217ENST00000487462 MBD5Q9P267 1494 aa15.79■□□□□ 0.12
CDK11A-217ENST00000487462 RTEL1-TNFRSF6BF6WH68 1400 aa15.79■□□□□ 0.12
CDK11A-217ENST00000487462 JCADQ9P266 1359 aa15.79■□□□□ 0.12
CDK11A-217ENST00000487462 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
CDK11A-217ENST00000487462 COL16A1Q07092 1604 aaPredicted RBP15.79■□□□□ 0.12
CDK11A-217ENST00000487462 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
CDK11A-217ENST00000487462 KIF3BO15066 747 aa15.78■□□□□ 0.12
CDK11A-217ENST00000487462 CFDP1Q9UEE9 299 aaPredicted RBP15.78■□□□□ 0.12
CDK11A-217ENST00000487462 NCOA2Q15596 1464 aa15.78■□□□□ 0.12
CDK11A-217ENST00000487462 ARHGAP23Q9P227 1491 aa15.78■□□□□ 0.12
CDK11A-217ENST00000487462 TMEM94Q12767 1356 aa15.77■□□□□ 0.12
CDK11A-217ENST00000487462 SLIT1O75093 1534 aa15.77■□□□□ 0.11
CDK11A-217ENST00000487462 LTKP29376 864 aa15.76■□□□□ 0.11
CDK11A-217ENST00000487462 ERVK-7P63135 1459 aa15.76■□□□□ 0.11
CDK11A-217ENST00000487462 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
CDK11A-217ENST00000487462 ZNF772Q68DY9 489 aaPredicted RBP15.74■□□□□ 0.11
CDK11A-217ENST00000487462 ABCC3O15438 1527 aa15.73■□□□□ 0.11
CDK11A-217ENST00000487462 ZNF644Q9H582 1327 aaPredicted RBP15.73■□□□□ 0.11
CDK11A-217ENST00000487462 TIAM1Q13009 1591 aa15.73■□□□□ 0.11
CDK11A-217ENST00000487462 FYCO1Q9BQS8 1478 aa15.72■□□□□ 0.11
CDK11A-217ENST00000487462 UBTFP17480 764 aaKnown RBP15.72■□□□□ 0.11
CDK11A-217ENST00000487462 CFAP65Q6ZU64 1925 aaKnown RBP15.72■□□□□ 0.11
CDK11A-217ENST00000487462 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
CDK11A-217ENST00000487462 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
CDK11A-217ENST00000487462 EP400Q96L91 3159 aa15.7■□□□□ 0.1
CDK11A-217ENST00000487462 PRDM15P57071 1507 aaPredicted RBP15.69■□□□□ 0.1
CDK11A-217ENST00000487462 RXRBP28702 533 aa15.69■□□□□ 0.1
CDK11A-217ENST00000487462 TXNDC2Q86VQ3 553 aa15.69■□□□□ 0.1
CDK11A-217ENST00000487462 RBM33Q96EV2 1170 aaKnown RBP15.69■□□□□ 0.1
CDK11A-217ENST00000487462 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms