RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 C6orf132Q5T0Z8 1188 aa10.38□□□□□ -0.75
LINC00888-204ENST00000487386 RBM33Q96EV2 1170 aaKnown RBP10.38□□□□□ -0.75
LINC00888-204ENST00000487386 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
LINC00888-204ENST00000487386 PTPREP23469 700 aa10.37□□□□□ -0.75
LINC00888-204ENST00000487386 MAP3K7O43318 606 aa10.36□□□□□ -0.75
LINC00888-204ENST00000487386 PSEN2P49810 448 aa10.36□□□□□ -0.75
LINC00888-204ENST00000487386 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
LINC00888-204ENST00000487386 BCANQ96GW7 911 aa10.35□□□□□ -0.75
LINC00888-204ENST00000487386 KCNK17Q96T54 332 aa10.35□□□□□ -0.75
LINC00888-204ENST00000487386 RBM26Q5T8P6 1007 aaKnown RBP10.34□□□□□ -0.75
LINC00888-204ENST00000487386 COL9A1P20849 921 aa10.33□□□□□ -0.76
LINC00888-204ENST00000487386 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
LINC00888-204ENST00000487386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC00888-204ENST00000487386 LSM11P83369 360 aaKnown RBP eCLIP10.32□□□□□ -0.76
LINC00888-204ENST00000487386 CDHR5Q9HBB8 845 aa10.32□□□□□ -0.76
LINC00888-204ENST00000487386 NPDC1Q9NQX5 325 aaPredicted RBP10.32□□□□□ -0.76
LINC00888-204ENST00000487386 PPP1R3GB7ZBB8 358 aa10.31□□□□□ -0.76
LINC00888-204ENST00000487386 SLC4A5Q9BY07 1137 aa10.31□□□□□ -0.76
LINC00888-204ENST00000487386 KCNH8Q96L42 1107 aa10.3□□□□□ -0.76
LINC00888-204ENST00000487386 ZBED2Q9BTP6 218 aa10.3□□□□□ -0.76
LINC00888-204ENST00000487386 TULP1O00294 542 aaPredicted RBP10.29□□□□□ -0.76
LINC00888-204ENST00000487386 TK2O00142 265 aa10.28□□□□□ -0.76
LINC00888-204ENST00000487386 CERKQ8TCT0 537 aa10.28□□□□□ -0.76
LINC00888-204ENST00000487386 PTGDRQ13258 359 aa10.27□□□□□ -0.77
LINC00888-204ENST00000487386 NUTM2FA1L443 756 aa10.26□□□□□ -0.77
LINC00888-204ENST00000487386 GPR37O15354 613 aa10.26□□□□□ -0.77
LINC00888-204ENST00000487386 LMOD2Q6P5Q4 547 aa10.26□□□□□ -0.77
LINC00888-204ENST00000487386 VPS9D1Q9Y2B5 631 aa10.26□□□□□ -0.77
LINC00888-204ENST00000487386 ANKRD13DQ6ZTN6 518 aa10.25□□□□□ -0.77
LINC00888-204ENST00000487386 ONECUT3O60422 494 aaPredicted RBP10.24□□□□□ -0.77
LINC00888-204ENST00000487386 ADGRD1Q6QNK2 874 aa10.24□□□□□ -0.77
LINC00888-204ENST00000487386 FCHSD2O94868 740 aa10.23□□□□□ -0.77
LINC00888-204ENST00000487386 PRSS12P56730 875 aa10.23□□□□□ -0.77
LINC00888-204ENST00000487386 PROX2Q3B8N5 592 aa10.23□□□□□ -0.77
LINC00888-204ENST00000487386 TTC13Q8NBP0 860 aa10.23□□□□□ -0.77
LINC00888-204ENST00000487386 RBM27Q9P2N5 1060 aaKnown RBP10.23□□□□□ -0.77
LINC00888-204ENST00000487386 HRO43593 1189 aa10.22□□□□□ -0.77
LINC00888-204ENST00000487386 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
LINC00888-204ENST00000487386 CDCA7LQ96GN5 454 aa10.22□□□□□ -0.77
LINC00888-204ENST00000487386 TRIM6-TRIM34B2RNG4 842 aa10.21□□□□□ -0.77
LINC00888-204ENST00000487386 BHMG1C9JSJ3 638 aaPredicted RBP10.21□□□□□ -0.77
LINC00888-204ENST00000487386 FAM198AQ9UFP1 575 aa10.21□□□□□ -0.77
LINC00888-204ENST00000487386 TSKSQ9UJT2 592 aa10.21□□□□□ -0.77
LINC00888-204ENST00000487386 HIC1Q14526 733 aa10.19□□□□□ -0.78
LINC00888-204ENST00000487386 RABGEF1Q9UJ41 708 aa10.19□□□□□ -0.78
LINC00888-204ENST00000487386 KIAA1468Q9P260 1216 aa10.18□□□□□ -0.78
LINC00888-204ENST00000487386 PADI6Q6TGC4 694 aa10.17□□□□□ -0.78
LINC00888-204ENST00000487386 SPNS2Q8IVW8 549 aa10.17□□□□□ -0.78
LINC00888-204ENST00000487386 GNPATO15228 680 aa10.16□□□□□ -0.78
LINC00888-204ENST00000487386 C3orf80F5H4A9 247 aa10.15□□□□□ -0.78
LINC00888-204ENST00000487386 FECHP22830 423 aa10.15□□□□□ -0.78
LINC00888-204ENST00000487386 PACS2Q86VP3 889 aa10.15□□□□□ -0.78
LINC00888-204ENST00000487386 ZC3H15Q8WU90 426 aaKnown RBP10.15□□□□□ -0.78
LINC00888-204ENST00000487386 ZMYND10O75800 440 aa10.12□□□□□ -0.79
LINC00888-204ENST00000487386 LAPTM4BQ86VI4 370 aa10.11□□□□□ -0.79
LINC00888-204ENST00000487386 TATDN2Q93075 761 aa10.11□□□□□ -0.79
LINC00888-204ENST00000487386 NBPF3Q9H094 633 aa10.11□□□□□ -0.79
LINC00888-204ENST00000487386 NBPF26B4DH59 902 aa10.1□□□□□ -0.79
LINC00888-204ENST00000487386 BARGINQ6ZT62 677 aa10.1□□□□□ -0.79
LINC00888-204ENST00000487386 EYA1Q99502 592 aa10.1□□□□□ -0.79
LINC00888-204ENST00000487386 ADGRG1Q9Y653 693 aa10.1□□□□□ -0.79
LINC00888-204ENST00000487386 NUDT18Q6ZVK8 323 aa10.09□□□□□ -0.79
LINC00888-204ENST00000487386 MRPL50Q8N5N7 158 aaKnown RBP10.09□□□□□ -0.79
LINC00888-204ENST00000487386 PNMA3Q9UL41 463 aa10.09□□□□□ -0.79
LINC00888-204ENST00000487386 SEPT9Q9UHD8 586 aaPredicted RBP10.08□□□□□ -0.8
LINC00888-204ENST00000487386 SMAPO00193 183 aa10.07□□□□□ -0.8
LINC00888-204ENST00000487386 MAP2K5Q13163 448 aa10.07□□□□□ -0.8
LINC00888-204ENST00000487386 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
LINC00888-204ENST00000487386 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
LINC00888-204ENST00000487386 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
LINC00888-204ENST00000487386 STAC3Q96MF2 364 aa10.06□□□□□ -0.8
LINC00888-204ENST00000487386 MINK1Q8N4C8 1332 aaPredicted RBP10.06□□□□□ -0.8
LINC00888-204ENST00000487386 IRF6O14896 467 aa10.05□□□□□ -0.8
LINC00888-204ENST00000487386 OATP04181 439 aa10.05□□□□□ -0.8
LINC00888-204ENST00000487386 MMRN1Q13201 1228 aa10.05□□□□□ -0.8
LINC00888-204ENST00000487386 PXYLP1Q8TE99 480 aa10.05□□□□□ -0.8
LINC00888-204ENST00000487386 RBM46Q8TBY0 533 aaKnown RBP10.04□□□□□ -0.8
LINC00888-204ENST00000487386 ZFRQ96KR1 1074 aaKnown RBP10.04□□□□□ -0.8
LINC00888-204ENST00000487386 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
LINC00888-204ENST00000487386 KRI1Q8N9T8 703 aaKnown RBP10□□□□□ -0.81
LINC00888-204ENST00000487386 CCDC102AQ96A19 550 aa10□□□□□ -0.81
LINC00888-204ENST00000487386 RNF166Q96A37 237 aaPredicted RBP10□□□□□ -0.81
LINC00888-204ENST00000487386 PHOX2BQ99453 314 aa10□□□□□ -0.81
LINC00888-204ENST00000487386 RCCD1A6NED2 376 aa9.99□□□□□ -0.81
LINC00888-204ENST00000487386 GOLGA8CPA6NN73 597 aa9.99□□□□□ -0.81
LINC00888-204ENST00000487386 WNT2BQ93097 391 aa9.99□□□□□ -0.81
LINC00888-204ENST00000487386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.98□□□□□ -0.81
LINC00888-204ENST00000487386 DNAJB2P25686 324 aa9.98□□□□□ -0.81
LINC00888-204ENST00000487386 ANKK1Q8NFD2 765 aa9.98□□□□□ -0.81
LINC00888-204ENST00000487386 KCTD12Q96CX2 325 aaKnown RBP9.98□□□□□ -0.81
LINC00888-204ENST00000487386 SOWAHBA6NEL2 793 aa9.97□□□□□ -0.81
LINC00888-204ENST00000487386 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
LINC00888-204ENST00000487386 THSD4Q6ZMP0 1018 aa9.96□□□□□ -0.82
LINC00888-204ENST00000487386 SAMD7Q7Z3H4 446 aa9.96□□□□□ -0.82
LINC00888-204ENST00000487386 AK7Q96M32 723 aa9.95□□□□□ -0.82
LINC00888-204ENST00000487386 SWT1Q5T5J6 900 aaKnown RBP9.94□□□□□ -0.82
LINC00888-204ENST00000487386 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
LINC00888-204ENST00000487386 SLC24A3Q9HC58 644 aa9.94□□□□□ -0.82
LINC00888-204ENST00000487386 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.94□□□□□ -0.82
LINC00888-204ENST00000487386 BCAMP50895 628 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms