RNA–Protein interactions for RNA: ENST00000487186.5

FAAP20-213, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 3,576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-213ENST00000487186 KIF15Q9NS87 1388 aa17.85■□□□□ 0.45
FAAP20-213ENST00000487186 SAMD9Q5K651 1589 aa17.85■□□□□ 0.45
FAAP20-213ENST00000487186 GGT6Q6P531 493 aa17.85■□□□□ 0.45
FAAP20-213ENST00000487186 DDRGK1Q96HY6 314 aa17.85■□□□□ 0.45
FAAP20-213ENST00000487186 KDM6BO15054 1643 aa17.85■□□□□ 0.45
FAAP20-213ENST00000487186 TMC1Q8TDI8 760 aa17.84■□□□□ 0.45
FAAP20-213ENST00000487186 ANKRD50Q9ULJ7 1429 aa17.84■□□□□ 0.45
FAAP20-213ENST00000487186 KIF3BO15066 747 aa17.82■□□□□ 0.44
FAAP20-213ENST00000487186 WDR62O43379 1518 aa17.82■□□□□ 0.44
FAAP20-213ENST00000487186 NBPF1Q3BBV0 1214 aa17.81■□□□□ 0.44
FAAP20-213ENST00000487186 BBXQ8WY36 941 aaPredicted RBP17.81■□□□□ 0.44
FAAP20-213ENST00000487186 RRAGDQ9NQL2 400 aaPredicted RBP17.8■□□□□ 0.44
FAAP20-213ENST00000487186 CAMSAP2Q08AD1 1489 aa17.8■□□□□ 0.44
FAAP20-213ENST00000487186 KIAA0556O60303 1618 aa17.8■□□□□ 0.44
FAAP20-213ENST00000487186 MAGI1Q96QZ7 1491 aaPredicted RBP17.8■□□□□ 0.44
FAAP20-213ENST00000487186 SLC4A3P48751 1232 aa17.8■□□□□ 0.44
FAAP20-213ENST00000487186 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
FAAP20-213ENST00000487186 KIF7Q2M1P5 1343 aa17.79■□□□□ 0.44
FAAP20-213ENST00000487186 LRRIQ1Q96JM4 1722 aa17.79■□□□□ 0.44
FAAP20-213ENST00000487186 EFCAB2Q5VUJ9 269 aa17.79■□□□□ 0.44
FAAP20-213ENST00000487186 ATP10BO94823 1461 aa17.79■□□□□ 0.44
FAAP20-213ENST00000487186 TAF7LQ5H9L4 462 aa17.78■□□□□ 0.44
FAAP20-213ENST00000487186 CYB5RLQ6IPT4 315 aa17.78■□□□□ 0.44
FAAP20-213ENST00000487186 GPATCH8Q9UKJ3 1502 aaKnown RBP17.78■□□□□ 0.44
FAAP20-213ENST00000487186 MIA2Q96PC5 1412 aa17.78■□□□□ 0.44
FAAP20-213ENST00000487186 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.78■□□□□ 0.441e-7■■■■□ 21
FAAP20-213ENST00000487186 SAFB2Q14151 953 aaKnown RBP eCLIP17.76■□□□□ 0.43
FAAP20-213ENST00000487186 C9orf84Q5VXU9 1444 aa17.76■□□□□ 0.43
FAAP20-213ENST00000487186 RAPGEF6Q8TEU7 1601 aa17.75■□□□□ 0.43
FAAP20-213ENST00000487186 KIF14Q15058 1648 aa17.75■□□□□ 0.43
FAAP20-213ENST00000487186 SPAG9O60271 1321 aaKnown RBP17.75■□□□□ 0.43
FAAP20-213ENST00000487186 NCOA1Q15788 1441 aa17.75■□□□□ 0.43
FAAP20-213ENST00000487186 MLECQ14165 292 aa17.74■□□□□ 0.43
FAAP20-213ENST00000487186 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
FAAP20-213ENST00000487186 ROCK2O75116 1388 aaKnown RBP17.74■□□□□ 0.43
FAAP20-213ENST00000487186 USP47Q96K76 1375 aa17.74■□□□□ 0.43
FAAP20-213ENST00000487186 PAXIP1Q6ZW49 1069 aaPredicted RBP17.74■□□□□ 0.43
FAAP20-213ENST00000487186 PRKRIP1Q9H875 184 aaPredicted RBP17.74■□□□□ 0.43
FAAP20-213ENST00000487186 ANKRD30BQ9BXX2 1392 aa17.74■□□□□ 0.43
FAAP20-213ENST00000487186 PDE4AP27815 886 aa17.73■□□□□ 0.43
FAAP20-213ENST00000487186 L1TD1Q5T7N2 865 aaKnown RBP17.73■□□□□ 0.43
FAAP20-213ENST00000487186 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
FAAP20-213ENST00000487186 ARHGAP5Q13017 1502 aa17.72■□□□□ 0.43
FAAP20-213ENST00000487186 CHMP4BQ9H444 224 aaKnown RBP17.71■□□□□ 0.43
FAAP20-213ENST00000487186 NAP1L2Q9ULW6 460 aaPredicted RBP17.71■□□□□ 0.43
FAAP20-213ENST00000487186 FRAT2O75474 233 aaPredicted RBP17.7■□□□□ 0.42
FAAP20-213ENST00000487186 ARID3AQ99856 593 aa17.7■□□□□ 0.42
FAAP20-213ENST00000487186 CCDC7Q96M83 1385 aa17.69■□□□□ 0.42
FAAP20-213ENST00000487186 AMER1Q5JTC6 1135 aaPredicted RBP17.68■□□□□ 0.42
FAAP20-213ENST00000487186 CALD1Q05682 793 aaKnown RBP17.67■□□□□ 0.42
FAAP20-213ENST00000487186 PDCL3Q9H2J4 239 aa17.67■□□□□ 0.42
FAAP20-213ENST00000487186 AKNAQ7Z591 1439 aa17.67■□□□□ 0.42
FAAP20-213ENST00000487186 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
FAAP20-213ENST00000487186 KLHL34Q8N239 644 aa17.65■□□□□ 0.42
FAAP20-213ENST00000487186 ERCC6L2Q5T890 1561 aa17.65■□□□□ 0.42
FAAP20-213ENST00000487186 CCDC144AA2RUR9 1427 aa17.64■□□□□ 0.41
FAAP20-213ENST00000487186 NCLP19338 710 aaKnown RBP17.64■□□□□ 0.41
FAAP20-213ENST00000487186 RAPGEF3O95398 923 aa17.63■□□□□ 0.41
FAAP20-213ENST00000487186 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
FAAP20-213ENST00000487186 NUP160Q12769 1436 aa17.63■□□□□ 0.41
FAAP20-213ENST00000487186 KIAA1107Q9UPP5 1409 aa17.62■□□□□ 0.41
FAAP20-213ENST00000487186 ZHX1Q9UKY1 873 aaPredicted RBP17.61■□□□□ 0.41
FAAP20-213ENST00000487186 STK26Q9P289 416 aa17.6■□□□□ 0.41
FAAP20-213ENST00000487186 DENND4BO75064 1496 aaPredicted RBP17.6■□□□□ 0.41
FAAP20-213ENST00000487186 TRIM44Q96DX7 344 aaPredicted RBP17.59■□□□□ 0.41
FAAP20-213ENST00000487186 STAG3Q9UJ98 1225 aa17.59■□□□□ 0.41
FAAP20-213ENST00000487186 SCAPERQ9BY12 1400 aa17.59■□□□□ 0.41
FAAP20-213ENST00000487186 TCOF1Q13428 1488 aaKnown RBP17.59■□□□□ 0.41
FAAP20-213ENST00000487186 PLEKHH2Q8IVE3 1493 aa17.59■□□□□ 0.41
FAAP20-213ENST00000487186 ROCK1Q13464 1354 aa17.58■□□□□ 0.4
FAAP20-213ENST00000487186 CLCN1P35523 988 aa17.58■□□□□ 0.4
FAAP20-213ENST00000487186 NEUROD2Q15784 382 aa17.58■□□□□ 0.4
FAAP20-213ENST00000487186 PANK3Q9H999 370 aa17.56■□□□□ 0.4
FAAP20-213ENST00000487186 BACH2Q9BYV9 841 aa17.56■□□□□ 0.4
FAAP20-213ENST00000487186 TRAK1Q9UPV9 953 aa17.56■□□□□ 0.4
FAAP20-213ENST00000487186 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
FAAP20-213ENST00000487186 TMEM132EQ6IEE7 984 aa17.55■□□□□ 0.4
FAAP20-213ENST00000487186 POGKQ9P215 609 aa17.54■□□□□ 0.4
FAAP20-213ENST00000487186 TPM2P07951 284 aa17.54■□□□□ 0.4
FAAP20-213ENST00000487186 PZPP20742 1482 aa17.54■□□□□ 0.4
FAAP20-213ENST00000487186 CNTLNQ9NXG0 1405 aa17.54■□□□□ 0.4
FAAP20-213ENST00000487186 FAM13BQ9NYF5 915 aa17.54■□□□□ 0.4
FAAP20-213ENST00000487186 SYCP2Q9BX26 1530 aa17.54■□□□□ 0.4
FAAP20-213ENST00000487186 GOLGA6L3A6NEY3 463 aa17.53■□□□□ 0.4
FAAP20-213ENST00000487186 PRDM4Q9UKN5 801 aa17.53■□□□□ 0.4
FAAP20-213ENST00000487186 CFAP70Q5T0N1 1121 aa17.53■□□□□ 0.4
FAAP20-213ENST00000487186 CDK11BP21127 795 aaKnown RBP17.52■□□□□ 0.39
FAAP20-213ENST00000487186 PLCD3Q8N3E9 789 aa17.51■□□□□ 0.39
FAAP20-213ENST00000487186 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
FAAP20-213ENST00000487186 GZF1Q9H116 711 aaPredicted RBP17.51■□□□□ 0.39
FAAP20-213ENST00000487186 KNSTRNQ9Y448 316 aa17.51■□□□□ 0.39
FAAP20-213ENST00000487186 TRAPPC8Q9Y2L5 1435 aa17.5■□□□□ 0.39
FAAP20-213ENST00000487186 TMF1P82094 1093 aa17.49■□□□□ 0.39
FAAP20-213ENST00000487186 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
FAAP20-213ENST00000487186 PRDM10Q9NQV6 1147 aa17.49■□□□□ 0.39
FAAP20-213ENST00000487186 CCDC141Q6ZP82 1450 aa17.49■□□□□ 0.39
FAAP20-213ENST00000487186 ANP32BQ92688 251 aaKnown RBP17.49■□□□□ 0.39
FAAP20-213ENST00000487186 ZBED9Q6R2W3 1325 aa17.48■□□□□ 0.39
FAAP20-213ENST00000487186 DNMT1P26358 1616 aaKnown RBP17.47■□□□□ 0.39
FAAP20-213ENST00000487186 PLIN1O60240 522 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms