RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 DISP3Q9P2K9 1392 aa15.72■□□□□ 0.11
NEK4-204ENST00000487068 CEP152O94986 1710 aa15.71■□□□□ 0.11
NEK4-204ENST00000487068 ZC3H13Q5T200 1668 aaKnown RBP15.7■□□□□ 0.1
NEK4-204ENST00000487068 ABCC5O15440 1437 aa15.7■□□□□ 0.1
NEK4-204ENST00000487068 DUOX2Q9NRD8 1548 aa15.7■□□□□ 0.1
NEK4-204ENST00000487068 RNF17Q9BXT8 1623 aaKnown RBP15.7■□□□□ 0.1
NEK4-204ENST00000487068 GGT6Q6P531 493 aa15.7■□□□□ 0.1
NEK4-204ENST00000487068 DHX29Q7Z478 1369 aaKnown RBP15.7■□□□□ 0.1
NEK4-204ENST00000487068 CNTLNQ9NXG0 1405 aa15.69■□□□□ 0.1
NEK4-204ENST00000487068 CFAP65Q6ZU64 1925 aaKnown RBP15.69■□□□□ 0.1
NEK4-204ENST00000487068 KIF3BO15066 747 aa15.68■□□□□ 0.1
NEK4-204ENST00000487068 KDM5DQ9BY66 1539 aa15.68■□□□□ 0.1
NEK4-204ENST00000487068 KIF15Q9NS87 1388 aa15.67■□□□□ 0.1
NEK4-204ENST00000487068 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
NEK4-204ENST00000487068 PTPRTO14522 1441 aa15.67■□□□□ 0.1
NEK4-204ENST00000487068 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
NEK4-204ENST00000487068 ILDR2Q71H61 639 aa15.65■□□□□ 0.1
NEK4-204ENST00000487068 SPATA31D1Q6ZQQ2 1576 aa15.65■□□□□ 0.1
NEK4-204ENST00000487068 FAM135AQ9P2D6 1515 aa15.64■□□□□ 0.09
NEK4-204ENST00000487068 CAMSAP1Q5T5Y3 1602 aa15.64■□□□□ 0.09
NEK4-204ENST00000487068 ERBINQ96RT1 1412 aa15.63■□□□□ 0.09
NEK4-204ENST00000487068 SOCS7O14512 581 aa15.63■□□□□ 0.09
NEK4-204ENST00000487068 ADRA2BP18089 450 aa15.63■□□□□ 0.09
NEK4-204ENST00000487068 RRP7BPQ9NSQ0 103 aa15.63■□□□□ 0.09
NEK4-204ENST00000487068 DEPDC5O75140 1603 aa15.63■□□□□ 0.09
NEK4-204ENST00000487068 MYO3AQ8NEV4 1616 aa15.63■□□□□ 0.09
NEK4-204ENST00000487068 MROH1Q8NDA8 1641 aa15.62■□□□□ 0.09
NEK4-204ENST00000487068 ITGAEP38570 1179 aa15.62■□□□□ 0.09
NEK4-204ENST00000487068 ADGRL2O95490 1459 aa15.62■□□□□ 0.09
NEK4-204ENST00000487068 PRDM15P57071 1507 aaPredicted RBP15.61■□□□□ 0.09
NEK4-204ENST00000487068 LTBP4Q8N2S1 1624 aa15.61■□□□□ 0.09
NEK4-204ENST00000487068 IQSEC2Q5JU85 1478 aa15.6■□□□□ 0.09
NEK4-204ENST00000487068 ZNF142P52746 1687 aaPredicted RBP15.6■□□□□ 0.09
NEK4-204ENST00000487068 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
NEK4-204ENST00000487068 ZMYM3Q14202 1370 aa15.59■□□□□ 0.09
NEK4-204ENST00000487068 ABCC3O15438 1527 aa15.58■□□□□ 0.09
NEK4-204ENST00000487068 WASHC2CQ9Y4E1 1318 aa15.58■□□□□ 0.08
NEK4-204ENST00000487068 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
NEK4-204ENST00000487068 RRBP1Q9P2E9 1410 aaKnown RBP15.57■□□□□ 0.08
NEK4-204ENST00000487068 PPP6R1Q9UPN7 881 aa15.56■□□□□ 0.08
NEK4-204ENST00000487068 NPATQ14207 1427 aa15.55■□□□□ 0.08
NEK4-204ENST00000487068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.55■□□□□ 0.08
NEK4-204ENST00000487068 PZPP20742 1482 aa15.54■□□□□ 0.08
NEK4-204ENST00000487068 PTPRKQ15262 1439 aa15.54■□□□□ 0.08
NEK4-204ENST00000487068 ANKRD50Q9ULJ7 1429 aa15.54■□□□□ 0.08
NEK4-204ENST00000487068 KANK1Q14678 1352 aa15.54■□□□□ 0.08
NEK4-204ENST00000487068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
NEK4-204ENST00000487068 UNC13BO14795 1591 aa15.53■□□□□ 0.08
NEK4-204ENST00000487068 CEP170BQ9Y4F5 1589 aaPredicted RBP15.53■□□□□ 0.08
NEK4-204ENST00000487068 ROCK1Q13464 1354 aa15.51■□□□□ 0.07
NEK4-204ENST00000487068 POLR1AO95602 1720 aaPredicted RBP15.51■□□□□ 0.07
NEK4-204ENST00000487068 TET3O43151 1660 aa15.51■□□□□ 0.07
NEK4-204ENST00000487068 TNRQ92752 1358 aa15.49■□□□□ 0.07
NEK4-204ENST00000487068 EFCAB6Q5THR3 1501 aa15.48■□□□□ 0.07
NEK4-204ENST00000487068 PLA2R1Q13018 1463 aa15.48■□□□□ 0.07
NEK4-204ENST00000487068 VWDEQ8N2E2 1590 aa15.48■□□□□ 0.07
NEK4-204ENST00000487068 IQGAP3Q86VI3 1631 aa15.47■□□□□ 0.07
NEK4-204ENST00000487068 ERVK-7P63135 1459 aa15.46■□□□□ 0.07
NEK4-204ENST00000487068 ZNF335Q9H4Z2 1342 aaPredicted RBP15.46■□□□□ 0.07
NEK4-204ENST00000487068 NCKAP5LQ9HCH0 1330 aa15.46■□□□□ 0.07
NEK4-204ENST00000487068 LMTK2Q8IWU2 1503 aa15.45■□□□□ 0.06
NEK4-204ENST00000487068 UBAP1LF5GYI3 381 aa15.45■□□□□ 0.06
NEK4-204ENST00000487068 KCNA4P22459 653 aa15.45■□□□□ 0.06
NEK4-204ENST00000487068 PKD2Q13563 968 aa15.45■□□□□ 0.06
NEK4-204ENST00000487068 A2ML1A8K2U0 1454 aa15.45■□□□□ 0.06
NEK4-204ENST00000487068 E9PCH4 1651 aa15.44■□□□□ 0.06
NEK4-204ENST00000487068 FOXD1Q16676 465 aa15.44■□□□□ 0.06
NEK4-204ENST00000487068 FBXO31Q5XUX0 539 aaPredicted RBP15.44■□□□□ 0.06
NEK4-204ENST00000487068 UBR1Q8IWV7 1749 aa15.43■□□□□ 0.06
NEK4-204ENST00000487068 NLRP1Q9C000 1473 aa15.43■□□□□ 0.06
NEK4-204ENST00000487068 MYO5BQ9ULV0 1848 aa15.43■□□□□ 0.06
NEK4-204ENST00000487068 UGGT1Q9NYU2 1555 aa15.42■□□□□ 0.06
NEK4-204ENST00000487068 PIK3C2BO00750 1634 aa15.42■□□□□ 0.06
NEK4-204ENST00000487068 ARHGAP31Q2M1Z3 1444 aa15.41■□□□□ 0.06
NEK4-204ENST00000487068 SPHKAPQ2M3C7 1700 aa15.4■□□□□ 0.06
NEK4-204ENST00000487068 NAIPQ13075 1403 aa15.39■□□□□ 0.05
NEK4-204ENST00000487068 SYNMO15061 1565 aa15.39■□□□□ 0.05
NEK4-204ENST00000487068 HFM1A2PYH4 1435 aa15.38■□□□□ 0.05
NEK4-204ENST00000487068 RPRD2Q5VT52 1461 aaKnown RBP15.38■□□□□ 0.05
NEK4-204ENST00000487068 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
NEK4-204ENST00000487068 NUP155O75694 1391 aa15.36■□□□□ 0.05
NEK4-204ENST00000487068 IQGAP1P46940 1657 aa15.34■□□□□ 0.05
NEK4-204ENST00000487068 ADGRB3O60242 1522 aa15.33■□□□□ 0.05
NEK4-204ENST00000487068 CPS1P31327 1500 aa15.33■□□□□ 0.05
NEK4-204ENST00000487068 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.04
NEK4-204ENST00000487068 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.04
NEK4-204ENST00000487068 NEURL4Q96JN8 1562 aa15.32■□□□□ 0.04
NEK4-204ENST00000487068 KIF1BO60333 1816 aa15.32■□□□□ 0.04
NEK4-204ENST00000487068 TRIM52Q96A61 297 aa15.32■□□□□ 0.04
NEK4-204ENST00000487068 MED1Q15648 1581 aaPredicted RBP15.32■□□□□ 0.04
NEK4-204ENST00000487068 TOM1O60784 492 aa15.3■□□□□ 0.04
NEK4-204ENST00000487068 NOS1P29475 1434 aa15.3■□□□□ 0.04
NEK4-204ENST00000487068 THEMISQ8N1K5 641 aaPredicted RBP15.3■□□□□ 0.04
NEK4-204ENST00000487068 PIP4K2BP78356 416 aa15.29■□□□□ 0.04
NEK4-204ENST00000487068 HSPA1LP34931 641 aa15.28■□□□□ 0.04
NEK4-204ENST00000487068 TMEM131LA2VDJ0 1609 aa15.27■□□□□ 0.03
NEK4-204ENST00000487068 SLIT1O75093 1534 aa15.26■□□□□ 0.03
NEK4-204ENST00000487068 CLTCL1P53675 1640 aa15.25■□□□□ 0.03
NEK4-204ENST00000487068 CHGAP10645 457 aaKnown RBP15.25■□□□□ 0.03
NEK4-204ENST00000487068 ANKLE2Q86XL3 938 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms