RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 DHX29Q7Z478 1369 aaKnown RBP20.35■□□□□ 0.85
NR1H3-223ENST00000486991 APLP2Q06481 763 aa20.35■□□□□ 0.85
NR1H3-223ENST00000486991 FBXO31Q5XUX0 539 aaPredicted RBP20.35■□□□□ 0.85
NR1H3-223ENST00000486991 KIF3BO15066 747 aa20.34■□□□□ 0.85
NR1H3-223ENST00000486991 CROCC2H7BZ55 1655 aa20.34■□□□□ 0.85
NR1H3-223ENST00000486991 PTPN23Q9H3S7 1636 aa20.32■□□□□ 0.84
NR1H3-223ENST00000486991 TCOF1Q13428 1488 aaKnown RBP20.31■□□□□ 0.84
NR1H3-223ENST00000486991 PPP6R1Q9UPN7 881 aa20.31■□□□□ 0.84
NR1H3-223ENST00000486991 PLA2R1Q13018 1463 aa20.3■□□□□ 0.84
NR1H3-223ENST00000486991 PKD2Q13563 968 aa20.3■□□□□ 0.84
NR1H3-223ENST00000486991 DNMT1P26358 1616 aaKnown RBP20.29■□□□□ 0.84
NR1H3-223ENST00000486991 IQSEC2Q5JU85 1478 aa20.29■□□□□ 0.84
NR1H3-223ENST00000486991 FGD6Q6ZV73 1430 aa20.28■□□□□ 0.84
NR1H3-223ENST00000486991 UBAP1LF5GYI3 381 aa20.28■□□□□ 0.84
NR1H3-223ENST00000486991 A2ML1A8K2U0 1454 aa20.28■□□□□ 0.84
NR1H3-223ENST00000486991 RSPH4AQ5TD94 716 aa20.27■□□□□ 0.84
NR1H3-223ENST00000486991 TNRQ92752 1358 aa20.26■□□□□ 0.83
NR1H3-223ENST00000486991 WASHC2CQ9Y4E1 1318 aa20.25■□□□□ 0.83
NR1H3-223ENST00000486991 SPATA31D1Q6ZQQ2 1576 aa20.24■□□□□ 0.83
NR1H3-223ENST00000486991 SHANK2Q9UPX8 1470 aa20.24■□□□□ 0.83
NR1H3-223ENST00000486991 RNF17Q9BXT8 1623 aaKnown RBP20.24■□□□□ 0.83
NR1H3-223ENST00000486991 KDM5DQ9BY66 1539 aa20.23■□□□□ 0.83
NR1H3-223ENST00000486991 ABCC5O15440 1437 aa20.22■□□□□ 0.83
NR1H3-223ENST00000486991 PZPP20742 1482 aa20.22■□□□□ 0.83
NR1H3-223ENST00000486991 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
NR1H3-223ENST00000486991 TSPY4P0CV99 314 aa20.21■□□□□ 0.83
NR1H3-223ENST00000486991 TSPY10P0CW01 314 aa20.21■□□□□ 0.83
NR1H3-223ENST00000486991 NEURL4Q96JN8 1562 aa20.21■□□□□ 0.83
NR1H3-223ENST00000486991 MROH1Q8NDA8 1641 aa20.2■□□□□ 0.82
NR1H3-223ENST00000486991 PPARGC1BQ86YN6 1023 aaKnown RBP20.2■□□□□ 0.82
NR1H3-223ENST00000486991 FAM135AQ9P2D6 1515 aa20.2■□□□□ 0.82
NR1H3-223ENST00000486991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.2■□□□□ 0.82
NR1H3-223ENST00000486991 DAPK1P53355 1430 aa20.19■□□□□ 0.82
NR1H3-223ENST00000486991 POLR1AO95602 1720 aaPredicted RBP20.18■□□□□ 0.82
NR1H3-223ENST00000486991 SOCS7O14512 581 aa20.17■□□□□ 0.82
NR1H3-223ENST00000486991 DUOX2Q9NRD8 1548 aa20.15■□□□□ 0.82
NR1H3-223ENST00000486991 SCAF1Q9H7N4 1312 aaKnown RBP20.14■□□□□ 0.81
NR1H3-223ENST00000486991 PIP4K2BP78356 416 aa20.14■□□□□ 0.81
NR1H3-223ENST00000486991 ANKLE2Q86XL3 938 aa20.14■□□□□ 0.81
NR1H3-223ENST00000486991 ZC3H13Q5T200 1668 aaKnown RBP20.13■□□□□ 0.81
NR1H3-223ENST00000486991 THEMISQ8N1K5 641 aaPredicted RBP20.12■□□□□ 0.81
NR1H3-223ENST00000486991 UGGT1Q9NYU2 1555 aa20.12■□□□□ 0.81
NR1H3-223ENST00000486991 ABCC3O15438 1527 aa20.12■□□□□ 0.81
NR1H3-223ENST00000486991 CEP152O94986 1710 aa20.11■□□□□ 0.81
NR1H3-223ENST00000486991 DEPDC5O75140 1603 aa20.11■□□□□ 0.81
NR1H3-223ENST00000486991 KIF15Q9NS87 1388 aa20.1■□□□□ 0.81
NR1H3-223ENST00000486991 VWDEQ8N2E2 1590 aa20.1■□□□□ 0.81
NR1H3-223ENST00000486991 ADGRL2O95490 1459 aa20.1■□□□□ 0.81
NR1H3-223ENST00000486991 NLRP1Q9C000 1473 aa20.1■□□□□ 0.81
NR1H3-223ENST00000486991 PRDM15P57071 1507 aaPredicted RBP20.09■□□□□ 0.81
NR1H3-223ENST00000486991 HSPA1LP34931 641 aa20.09■□□□□ 0.81
NR1H3-223ENST00000486991 NPHP4O75161 1426 aaPredicted RBP20.09■□□□□ 0.81
NR1H3-223ENST00000486991 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.81
NR1H3-223ENST00000486991 ERBINQ96RT1 1412 aa20.08■□□□□ 0.8
NR1H3-223ENST00000486991 CPS1P31327 1500 aa20.07■□□□□ 0.8
NR1H3-223ENST00000486991 ERVK-7P63135 1459 aa20.05■□□□□ 0.8
NR1H3-223ENST00000486991 MED14O60244 1454 aa20.05■□□□□ 0.8
NR1H3-223ENST00000486991 TOM1O60784 492 aa20.04■□□□□ 0.8
NR1H3-223ENST00000486991 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
NR1H3-223ENST00000486991 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
NR1H3-223ENST00000486991 RRP7BPQ9NSQ0 103 aa20.03■□□□□ 0.8
NR1H3-223ENST00000486991 IQGAP1P46940 1657 aa20.03■□□□□ 0.8
NR1H3-223ENST00000486991 ALKQ9UM73 1620 aa20.02■□□□□ 0.79
NR1H3-223ENST00000486991 ANKRD30AQ9BXX3 1397 aa20.01■□□□□ 0.79
NR1H3-223ENST00000486991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20■□□□□ 0.79
NR1H3-223ENST00000486991 FAM50AQ14320 339 aaKnown RBP19.99■□□□□ 0.79
NR1H3-223ENST00000486991 CHIC2Q9UKJ5 165 aa19.99■□□□□ 0.79
NR1H3-223ENST00000486991 UBR1Q8IWV7 1749 aa19.99■□□□□ 0.79
NR1H3-223ENST00000486991 LTKP29376 864 aa19.98■□□□□ 0.79
NR1H3-223ENST00000486991 LRRC7Q96NW7 1537 aa19.97■□□□□ 0.79
NR1H3-223ENST00000486991 MED1Q15648 1581 aaPredicted RBP19.95■□□□□ 0.78
NR1H3-223ENST00000486991 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
NR1H3-223ENST00000486991 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
NR1H3-223ENST00000486991 ARHGAP31Q2M1Z3 1444 aa19.93■□□□□ 0.78
NR1H3-223ENST00000486991 RRBP1Q9P2E9 1410 aaKnown RBP19.93■□□□□ 0.78
NR1H3-223ENST00000486991 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
NR1H3-223ENST00000486991 UNC13BO14795 1591 aa19.92■□□□□ 0.78
NR1H3-223ENST00000486991 ROCK1Q13464 1354 aa19.91■□□□□ 0.78
NR1H3-223ENST00000486991 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
NR1H3-223ENST00000486991 ARHGAP23Q9P227 1491 aa19.9■□□□□ 0.78
NR1H3-223ENST00000486991 EFCAB6Q5THR3 1501 aa19.9■□□□□ 0.78
NR1H3-223ENST00000486991 PIK3C2BO00750 1634 aa19.9■□□□□ 0.78
NR1H3-223ENST00000486991 SLIT1O75093 1534 aa19.88■□□□□ 0.77
NR1H3-223ENST00000486991 IDI1Q13907 227 aa19.86■□□□□ 0.77
NR1H3-223ENST00000486991 TET3O43151 1660 aa19.86■□□□□ 0.77
NR1H3-223ENST00000486991 SYNMO15061 1565 aa19.86■□□□□ 0.77
NR1H3-223ENST00000486991 STAG3Q9UJ98 1225 aa19.85■□□□□ 0.77
NR1H3-223ENST00000486991 EID1Q9Y6B2 187 aa19.85■□□□□ 0.77
NR1H3-223ENST00000486991 XIRP1Q702N8 1843 aaKnown RBP19.85■□□□□ 0.77
NR1H3-223ENST00000486991 GCC2Q8IWJ2 1684 aa19.84■□□□□ 0.77
NR1H3-223ENST00000486991 KANK1Q14678 1352 aa19.84■□□□□ 0.77
NR1H3-223ENST00000486991 TMEM2Q9UHN6 1383 aa19.83■□□□□ 0.77
NR1H3-223ENST00000486991 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.76
NR1H3-223ENST00000486991 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
NR1H3-223ENST00000486991 SLC26A8Q96RN1 970 aa19.81■□□□□ 0.76
NR1H3-223ENST00000486991 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
NR1H3-223ENST00000486991 NOS1P29475 1434 aa19.81■□□□□ 0.76
NR1H3-223ENST00000486991 KDM5AP29375 1690 aaKnown RBP19.81■□□□□ 0.76
NR1H3-223ENST00000486991 E9PCH4 1651 aa19.8■□□□□ 0.76
NR1H3-223ENST00000486991 RPRD2Q5VT52 1461 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms