RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 KANK1Q14678 1352 aa16.57■□□□□ 0.24
PRKCB-207ENST00000486868 VWDEQ8N2E2 1590 aa16.56■□□□□ 0.24
PRKCB-207ENST00000486868 DIP2BQ9P265 1576 aa16.56■□□□□ 0.24
PRKCB-207ENST00000486868 FAM69CQ0P6D2 419 aa16.56■□□□□ 0.24
PRKCB-207ENST00000486868 A2MP01023 1474 aa16.55■□□□□ 0.24
PRKCB-207ENST00000486868 KIDINS220Q9ULH0 1771 aa16.55■□□□□ 0.24
PRKCB-207ENST00000486868 UHRF1BP1Q6BDS2 1440 aa16.54■□□□□ 0.24
PRKCB-207ENST00000486868 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
PRKCB-207ENST00000486868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRKCB-207ENST00000486868 PRDM15P57071 1507 aaPredicted RBP16.53■□□□□ 0.24
PRKCB-207ENST00000486868 PLA2R1Q13018 1463 aa16.53■□□□□ 0.24
PRKCB-207ENST00000486868 CCDC144AA2RUR9 1427 aa16.53■□□□□ 0.24
PRKCB-207ENST00000486868 LMTK2Q8IWU2 1503 aa16.52■□□□□ 0.24
PRKCB-207ENST00000486868 PTPRTO14522 1441 aa16.52■□□□□ 0.23
PRKCB-207ENST00000486868 KIF3BO15066 747 aa16.51■□□□□ 0.23
PRKCB-207ENST00000486868 STAC3Q96MF2 364 aa16.51■□□□□ 0.23
PRKCB-207ENST00000486868 MYT1LQ9UL68 1186 aa16.51■□□□□ 0.23
PRKCB-207ENST00000486868 BCORL1Q5H9F3 1711 aa16.5■□□□□ 0.23
PRKCB-207ENST00000486868 ZMYM4Q5VZL5 1548 aa16.49■□□□□ 0.23
PRKCB-207ENST00000486868 RNF17Q9BXT8 1623 aaKnown RBP16.48■□□□□ 0.23
PRKCB-207ENST00000486868 TET3O43151 1660 aa16.47■□□□□ 0.23
PRKCB-207ENST00000486868 EIF4G2P78344 907 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRKCB-207ENST00000486868 NBPF8Q3BBV2 869 aa16.47■□□□□ 0.23
PRKCB-207ENST00000486868 MROH1Q8NDA8 1641 aa16.46■□□□□ 0.23
PRKCB-207ENST00000486868 RAPGEF3O95398 923 aa16.46■□□□□ 0.23
PRKCB-207ENST00000486868 FRMPD1Q5SYB0 1578 aa16.46■□□□□ 0.23
PRKCB-207ENST00000486868 RICTORQ6R327 1708 aa16.45■□□□□ 0.22
PRKCB-207ENST00000486868 NEURL4Q96JN8 1562 aa16.45■□□□□ 0.22
PRKCB-207ENST00000486868 TRPM2O94759 1503 aa16.45■□□□□ 0.22
PRKCB-207ENST00000486868 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
PRKCB-207ENST00000486868 ABCA6Q8N139 1617 aa16.42■□□□□ 0.22
PRKCB-207ENST00000486868 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
PRKCB-207ENST00000486868 SPATA31E1Q6ZUB1 1445 aa16.42■□□□□ 0.22
PRKCB-207ENST00000486868 RALGAPBQ86X10 1494 aa16.42■□□□□ 0.22
PRKCB-207ENST00000486868 PPRC1Q5VV67 1664 aaKnown RBP16.41■□□□□ 0.22
PRKCB-207ENST00000486868 REREQ9P2R6 1566 aa16.41■□□□□ 0.22
PRKCB-207ENST00000486868 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
PRKCB-207ENST00000486868 E9PCH4 1651 aa16.4■□□□□ 0.22
PRKCB-207ENST00000486868 EFCAB6Q5THR3 1501 aa16.4■□□□□ 0.22
PRKCB-207ENST00000486868 ARHGAP31Q2M1Z3 1444 aa16.38■□□□□ 0.21
PRKCB-207ENST00000486868 AGLP35573 1532 aa16.37■□□□□ 0.21
PRKCB-207ENST00000486868 PRAG1Q86YV5 1406 aa16.36■□□□□ 0.21
PRKCB-207ENST00000486868 YEATS2Q9ULM3 1422 aa16.36■□□□□ 0.21
PRKCB-207ENST00000486868 DCAF11Q8TEB1 546 aa16.36■□□□□ 0.21
PRKCB-207ENST00000486868 ARID4BQ4LE39 1312 aaPredicted RBP16.36■□□□□ 0.21
PRKCB-207ENST00000486868 GPRASP1Q5JY77 1395 aa16.36■□□□□ 0.21
PRKCB-207ENST00000486868 MIER1Q8N108 512 aa16.35■□□□□ 0.21
PRKCB-207ENST00000486868 CNTLNQ9NXG0 1405 aa16.35■□□□□ 0.21
PRKCB-207ENST00000486868 ABCC3O15438 1527 aa16.35■□□□□ 0.21
PRKCB-207ENST00000486868 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.21
PRKCB-207ENST00000486868 WASHC2CQ9Y4E1 1318 aa16.33■□□□□ 0.2
PRKCB-207ENST00000486868 NPATQ14207 1427 aa16.32■□□□□ 0.2
PRKCB-207ENST00000486868 GGT6Q6P531 493 aa16.32■□□□□ 0.2
PRKCB-207ENST00000486868 KIF13AQ9H1H9 1805 aa16.32■□□□□ 0.2
PRKCB-207ENST00000486868 NOS1P29475 1434 aa16.31■□□□□ 0.2
PRKCB-207ENST00000486868 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
PRKCB-207ENST00000486868 USP47Q96K76 1375 aa16.3■□□□□ 0.2
PRKCB-207ENST00000486868 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
PRKCB-207ENST00000486868 RGL3Q3MIN7 710 aa16.29■□□□□ 0.2
PRKCB-207ENST00000486868 CARD11Q9BXL7 1154 aa16.29■□□□□ 0.2
PRKCB-207ENST00000486868 KDM2AQ9Y2K7 1162 aa16.29■□□□□ 0.2
PRKCB-207ENST00000486868 CLTCL1P53675 1640 aa16.29■□□□□ 0.2
PRKCB-207ENST00000486868 LAMC1P11047 1609 aa16.28■□□□□ 0.2
PRKCB-207ENST00000486868 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
PRKCB-207ENST00000486868 CEP152O94986 1710 aa16.28■□□□□ 0.2
PRKCB-207ENST00000486868 ROCK2O75116 1388 aaKnown RBP16.27■□□□□ 0.2
PRKCB-207ENST00000486868 CCDC7Q96M83 1385 aa16.27■□□□□ 0.2
PRKCB-207ENST00000486868 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.2
PRKCB-207ENST00000486868 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.2
PRKCB-207ENST00000486868 HIRIP3Q9BW71 556 aaPredicted RBP16.27■□□□□ 0.2
PRKCB-207ENST00000486868 ZNF326Q5BKZ1 582 aaKnown RBP16.26■□□□□ 0.19
PRKCB-207ENST00000486868 MYOM2P54296 1465 aa16.26■□□□□ 0.19
PRKCB-207ENST00000486868 SLC52A1Q9NWF4 448 aa16.25■□□□□ 0.19
PRKCB-207ENST00000486868 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
PRKCB-207ENST00000486868 ARHGEF40Q8TER5 1519 aa16.24■□□□□ 0.19
PRKCB-207ENST00000486868 TRPM1Q7Z4N2 1603 aa16.24■□□□□ 0.19
PRKCB-207ENST00000486868 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
PRKCB-207ENST00000486868 ADGRB3O60242 1522 aa16.22■□□□□ 0.19
PRKCB-207ENST00000486868 CCER2I3L3R5 266 aa16.21■□□□□ 0.19
PRKCB-207ENST00000486868 NRXN1Q9ULB1 1477 aa16.21■□□□□ 0.19
PRKCB-207ENST00000486868 KIF7Q2M1P5 1343 aa16.2■□□□□ 0.18
PRKCB-207ENST00000486868 ANP32CO43423 234 aa16.2■□□□□ 0.18
PRKCB-207ENST00000486868 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
PRKCB-207ENST00000486868 C11orf95C9JLR9 678 aaPredicted RBP16.19■□□□□ 0.18
PRKCB-207ENST00000486868 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
PRKCB-207ENST00000486868 KIAA1210Q9ULL0 1709 aa16.18■□□□□ 0.18
PRKCB-207ENST00000486868 PIK3C2BO00750 1634 aa16.18■□□□□ 0.18
PRKCB-207ENST00000486868 KIF1BO60333 1816 aa16.17■□□□□ 0.18
PRKCB-207ENST00000486868 ST20-MTHFSA0A0A6YYL1 179 aa16.17■□□□□ 0.18
PRKCB-207ENST00000486868 NBPF1Q3BBV0 1214 aa16.17■□□□□ 0.18
PRKCB-207ENST00000486868 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
PRKCB-207ENST00000486868 ZFYVE9O95405 1425 aa16.16■□□□□ 0.18
PRKCB-207ENST00000486868 POLR1AO95602 1720 aaPredicted RBP16.16■□□□□ 0.18
PRKCB-207ENST00000486868 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
PRKCB-207ENST00000486868 UGGT1Q9NYU2 1555 aa16.15■□□□□ 0.18
PRKCB-207ENST00000486868 SYNMO15061 1565 aa16.14■□□□□ 0.17
PRKCB-207ENST00000486868 SCAF11Q99590 1463 aaKnown RBP16.14■□□□□ 0.17
PRKCB-207ENST00000486868 ERVK-7P63135 1459 aa16.13■□□□□ 0.17
PRKCB-207ENST00000486868 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
PRKCB-207ENST00000486868 IDI1Q13907 227 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms